Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03156 and BL01450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_03156___yojN.1.5803.seq
# -bsequence dna-align/BL01450___yojN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03156___yojN-BL01450___yojN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03156___yojN-BL01450___yojN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03156___yojN
# 2: BL01450___yojN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 931
# Identity: 665/931 (71.4%)
# Similarity: 665/931 (71.4%)
# Gaps: 80/931 ( 8.6%)
# Score: 2345.0
#
#
#=======================================
BSNT_03156___ 1 -------ATGACAACTC------AACTACAGCACTTAACATTGCCGGAAG 37
|||| || |||||.||| ||||.|||.
BL01450___yoj 1 ATGAAATATGA----TCTGCACGAACTAGAGC---------TGCCTGAAA 37
BSNT_03156___ 38 ATATACAACAAAAGCTTTTATCA-------TATAAAGAGCAGCCTATTTC 80
|.|||.||.|...|||..| ||| ..|||| |||.||..
BL01450___yoj 38 AGATAAAAGAGCGGCTGAT-TCAGTCTGCCGCTAAA------CCTGTTGA 80
BSNT_03156___ 81 CCCGGAGTTTCAATCGCTTATAGGAACATCAGGCTATGAGGCGGAGGATG 130
|.||||.|..|||||..|.||.||.||..|.||||||||.|||||.||..
BL01450___yoj 81 CGCGGAATACCAATCATTGATTGGGACGCCCGGCTATGAAGCGGAAGACA 130
BSNT_03156___ 131 AAGCCATTTTATTTGACGCCATTATTGCATTAGCCA-TGGGGAAAAATGT 179
..||||||.|.|.||||||.||.||.||.|| |.|| |.||.|||||.||
BL01450___yoj 131 GCGCCATTCTCTATGACGCGATGATCGCGTT-GTCACTCGGAAAAAACGT 179
BSNT_03156___ 180 CCTGCTGAAAGGGCCTACAGGTTCAGGAAAAACAAAGTTGGCAGAAACAT 229
..||.|.|||||.||.||||||||.|||||||||||..|.||.|||||..
BL01450___yoj 180 TTTGTTAAAAGGTCCGACAGGTTCCGGAAAAACAAAACTTGCCGAAACGC 229
BSNT_03156___ 230 TGTCCAGC-TATTTTAATAAACCGATGCACAGCGTCAACTGTTCAGTCGA 278
|.||| || ||||||.|.|||||.||||||||.|||||||||||.||.||
BL01450___yoj 230 TCTCC-GCTTATTTTCAAAAACCTATGCACAGTGTCAACTGTTCTGTGGA 278
BSNT_03156___ 279 CTTGGACGCTGAGGCATTGGTCGGTTATAAAACGATTGAAAATCAATCTG 328
|.|.||.||.|||||..|.||||||||.|||||||||||||| || |.|
BL01450___yoj 279 CCTTGATGCAGAGGCGCTTGTCGGTTACAAAACGATTGAAAA-CA--CCG 325
BSNT_03156___ 329 GC---CAGGCGACAATCGAGTTTGTTTCAGGACCTGTTACAAAGGCAATG 375
|| .|.||..|.||.||.|||||...|||.||.||.|||||.||||||
BL01450___yoj 326 GCGGGAACGCCTCTATTGAATTTGTCGAAGGTCCCGTGACAAAAGCAATG 375
BSNT_03156___ 376 AAGGAAGGCCATTTTCTTTATATAGATGAAATCAATATGGCGAAGCCGGA 425
||..|.||||||||.||.|||||.||.||||||||.||||||||.|||||
BL01450___yoj 376 AACAACGGCCATTTCCTATATATTGACGAAATCAACATGGCGAAACCGGA 425
BSNT_03156___ 426 AACACTGCCTATTTTAAACGGTGTATTAGATTACAGAAAAATGATGACAA 475
|||.|||||.||.||||||||.||..|.||||||.|.|||||||||||.|
BL01450___yoj 426 AACGCTGCCGATCTTAAACGGGGTGCTGGATTACCGGAAAATGATGACCA 475
BSNT_03156___ 476 ATCCGTTTACAGGCGAGGTCATACGGGCTAAAAGC-------GGTTTCGG 518
|||||||||||||.||.||| .|.||||| ||.|||||
BL01450___yoj 476 ATCCGTTTACAGGGGAAGTC-------GTCAAAGCGAAAGAGGGATTCGG 518
BSNT_03156___ 519 AGTCATTGCAGCCATCAATGAAGGTTATGTCGGAACTGTTCCTCTGAATG 568
.||.||||||||.||.||.|||||.|||||||||||.||.||..||||.|
BL01450___yoj 519 CGTAATTGCAGCAATAAACGAAGGGTATGTCGGAACAGTCCCATTGAACG 568
BSNT_03156___ 569 AAGCGTTGAAAAACCGTTTTGTCATCATTGATGTGCCTTATATTAAAGGC 618
|||||.||||||||||.|||||.|||||.||.|||||.||.|||||||||
BL01450___yoj 569 AAGCGCTGAAAAACCGGTTTGTGATCATCGACGTGCCATACATTAAAGGC 618
BSNT_03156___ 619 GAGCTGCTGAAACAAGTGCTCATG--TCTCAGTCAGCCCTGAAAGACGAG 666
||.||||||||||..||||| || .|.||.||.|..||.|||.|..||
BL01450___yoj 619 GACCTGCTGAAACGGGTGCT--TGAAACACAATCCGAACTAAAAAATCAG 666
BSNT_03156___ 667 AAATTGATTGACAGATTTATCACGCTTTCCTCTGACTTGAT--CGTTCAG 714
||..||.|.|||.|.|||.||||.||.||.||.||.||.|| || ||.
BL01450___yoj 667 AAGCTGCTGGACCGGTTTGTCACCCTGTCATCGGATTTAATGACG--CAA 714
BSNT_03156___ 715 GCCCATAACGGACAGGTGTCTGAAGAAGCGGCGTCCATCAGAGCTTTAAT 764
|||||.|||||||||||.||||||||.||.||.|||||||||||..|..|
BL01450___yoj 715 GCCCACAACGGACAGGTATCTGAAGAGGCTGCTTCCATCAGAGCGCTTCT 764
BSNT_03156___ 765 CGATACATGTGATTTAGCTG----CTTATATTCCGCCGCGTCGTGCCATT 810
||||||.||.||| ||| |.|||||||||||||..||.||.||.
BL01450___yoj 765 CGATACTTGCGAT----CTGTCGACGTATATTCCGCCGCTGCGAGCGATC 810
BSNT_03156___ 811 GAGCGAGGAATTGTAGAAAAGCTTGATGATGATCGGGAAAAAGCGGCCGT 860
||.||.||.||.||.|||||||||||||||||.||.|||||||||||.||
BL01450___yoj 811 GAACGGGGCATCGTTGAAAAGCTTGATGATGAACGCGAAAAAGCGGCGGT 860
BSNT_03156___ 861 CCGAAATATTGCAGAAACTCTGTTTGAATGA 891
||||||||||||..|||||.||||.||||||
BL01450___yoj 861 CCGAAATATTGCCCAAACTTTGTTCGAATGA 891
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