Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03159 and BL01448
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_03159___yojL.1.5803.seq
# -bsequence dna-align/BL01448___cwlS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03159___yojL-BL01448___cwlS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03159___yojL-BL01448___cwlS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03159___yojL
# 2: BL01448___cwlS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1399
# Identity: 859/1399 (61.4%)
# Similarity: 859/1399 (61.4%)
# Gaps: 245/1399 (17.5%)
# Score: 2593.5
#
#
#=======================================
BSNT_03159___ 1 ATGAAAAAGAAGATTGTAGCCGGCTTGGCTGTTTCTGCAGTTGTTGGGTC 50
|||||.||||||||.|.|||.||.|||||.|..|||||.||.|||||..|
BL01448___cwl 1 ATGAAGAAGAAGATAGCAGCAGGTTTGGCGGCCTCTGCGGTAGTTGGAAC 50
BSNT_03159___ 51 GTCGATGGCCGCAGCACCCGCGGAAGCAAAAACGATAAAAGTAAAAAGCG 100
.||..||||.||..||||.|..|||||..||||.||.||.||.|||||||
BL01448___cwl 51 TTCATTGGCGGCGTCACCGGTCGAAGCCCAAACCATCAAGGTGAAAAGCG 100
BSNT_03159___ 101 GTGACTCTCTTTGGAAACTTTC--CCGCCAGTATGATACGACAATATCAG 148
|.|||||.||.|||||.||||| |.| ||||..||||||...|.||.|
BL01448___cwl 101 GAGACTCACTGTGGAAGCTTTCAGCTG--AGTACAATACGAGTGTTTCGG 148
BSNT_03159___ 149 CTCTGAAATCCGAAAACAAATTGAAATCAACGGTGCTTTATGTCGGACAA 198
|.||..||||.|..|||||..|...|||.|||||..||||||||||||||
BL01448___cwl 149 CACTTCAATCAGCCAACAATCTTTCATCGACGGTTATTTATGTCGGACAA 198
BSNT_03159___ 199 AGTCTTAAGGTTCCTGAAAGCAGCAA---AAAAAGC---------ACGAC 236
|.|.|.||.|||||.|| |.|||| .|||||| ||.|.
BL01448___cwl 199 ACTTTAAAAGTTCCGGA---CGGCAAGTCGAAAAGCAGCTCACAGACAAA 245
BSNT_03159___ 237 ATCCCCA---------TCTAATTCAAG------CAAAACGTCAACATACA 271
||||.|| ||.|.|||||| ||| |||.||.||||
BL01448___cwl 246 ATCCGCAAGTTCCAGCTCAAGTTCAAGCGCTGCCAA---GTCCACTTACA 292
BSNT_03159___ 272 CAGTTGCATATGGTGATTCCCTATGGATGATTGCTAAAAATCATAAAATG 321
|.||...||..||.||||||.|.|||.|||||||.|.|.|..|.||||.|
BL01448___cwl 293 CGGTGAAATTGGGAGATTCCTTGTGGCTGATTGCCAGAGACTACAAAACG 342
BSNT_03159___ 322 AGTGTTTCTGAGCTTAAAAGCTTAAACAGCCTGAGCAGTGACCTGATTCG 371
|..||....|||.||||||.|||||||.|.||||||||.||..|||||..
BL01448___cwl 343 ACCGTACAAGAGATTAAAAACTTAAACGGGCTGAGCAGCGATATGATTTA 392
BSNT_03159___ 372 TCCGGGGCAAAAGCTTAAGATCAAAGGGA---CAA------GCAGTTCAA 412
||||||.||||||||....||.|||||.| ||| .|.||||.|
BL01448___cwl 393 TCCGGGACAAAAGCTGGTTATTAAAGGAAGCGCAAAAAGCGCCGGTTCCA 442
BSNT_03159___ 413 GCGGATCAAATGGATCAAAGAAAAACAGCGGTTCCAATTCTTCAGGTTC- 461
|| || |||||||| |.|||||.||.||.||.||
BL01448___cwl 443 GC---TC---TGGATCAA------------GCTCCAAATCATCCGGCTCA 474
BSNT_03159___ 462 --------------------------TTCAAAAAGTACATATACGGTCAA 485
|||||..||.|||||.|..|||||
BL01448___cwl 475 TCATCCGGCTCACAAAGTGCAAGCAGTTCAAGCAGCACATACAAAGTCAA 524
BSNT_03159___ 486 GCTTGGTGACTCACTGTGGAAAATCGCAAACAGCTTAAATATGACTGTAG 535
..|.||.|||||..|.||||||||.||.||.||.||.||||||||.||.|
BL01448___cwl 525 ATTGGGCGACTCTTTATGGAAAATTGCCAATAGTTTGAATATGACAGTCG 574
BSNT_03159___ 536 CCGAATTAAAAACTTTAAATGGCTTAACA--------TCAGATACACTTT 577
|||||.|.||||| |||.|||| ||.||.||..|.|
BL01448___cwl 575 CCGAAATTAAAAC--------GCTGAACAACTTGAAGTCGGACACGATCT 616
BSNT_03159___ 578 ATCCTAAACAGGTGCTCAAAATAAAAGGAAGCAGTT---CGCCTAAGAAC 624
|.||.||.|||||.||.|||.|.||||||| ||||| .||..|||.|
BL01448___cwl 617 ACCCGAACCAGGTCCTTAAAGTGAAAGGAA-CAGTTTCCAGCGGAAGCA- 664
BSNT_03159___ 625 GGAAACAGC----GGTTCCAAAAAGCCGTCAAACTC-------------- 656
||.||.| ||||| |.|.||||.|||
BL01448___cwl 665 --AACCATCTTCTGGTTC------GTCTTCAAGCTCTTCATCAAGTAAAA 706
BSNT_03159___ 657 CAATCCC----------TCAAAAAGAACGACGTACAAGGTAAAAGCAGGC 696
|.|.|.| |||||||..||.||.||||.|||.|||.|.|||
BL01448___cwl 707 CGAACACAGGCAGCAGTTCAAAAACGACCACTTACACGGTTAAACCGGGC 756
BSNT_03159___ 697 GATTCGCTGTGGAAAATTGCAAATCGGCTCG--GA--GTCACTGTCCAAA 742
|||||.|||||||||||.||.||| ||| || ||.||.||.||.|
BL01448___cwl 757 GATTCTCTGTGGAAAATCGCGAAT----TCGATGAAGGTAACGGTACAGA 802
BSNT_03159___ 743 GCATCCGTGA-----------TAAAAACAATTTATCATCGGATGTGCTGC 781
|||||.|.|| |||||||| |||||..|||
BL01448___cwl 803 GCATCAGAGAGGCTAATCAATTAAAAACA-----------GATGTATTGC 841
BSNT_03159___ 782 AAATCGGGCAGGTTCTGACTATTTCTGGAGCATCAAAATCTAATCCTTCA 831
||.||||.|||...||.|..||||||||.||||| ..|||||
BL01448___cwl 842 AAGTCGGCCAGAAGCTTAAAATTTCTGGTGCATC---------GTCTTCA 882
BSNT_03159___ 832 ----AATCCGACAAAGCCAACAAAGCCAA-----AAGAT-----AAC--- 864
.|||.|.| ||||.| .||.| |||
BL01448___cwl 883 GGGTCATCTGGC-----------AGCCCATCTTCCAGCTCGCCGAACTCT 921
BSNT_03159___ 865 TCAGGGTCAA-----ACATTCAAATAGGCTCGAAGATTGACAGAATGATC 909
||||..|||| || ||| .|.|.||.|.||..|.||..|.|||||.
BL01448___cwl 922 TCAGTTTCAACCGGCAC-TTC-GACAAGCGCAAAAGTCGAGCGGATGATT 969
BSNT_03159___ 910 ACGGAAGCGAAAAAATATGTCGGAGTGCCTTACCGATGGGGCGGAAACAC 959
.|.||.||..||||..||.||||.|||||||||.|||||||.||.||||.
BL01448___cwl 970 GCAGAGGCAGAAAAGCATATCGGCGTGCCTTACAGATGGGGAGGCAACAA 1019
BSNT_03159___ 960 GCCTGCCGGTTTTGATTGCAGCGGCTTCATTTATTACCTCATT-AATAAT 1008
.|||.||||||||||.||||||||.|||||.||||| |.|.|| ||.||.
BL01448___cwl 1020 TCCTTCCGGTTTTGACTGCAGCGGATTCATCTATTA-CACGTTGAACAAA 1068
BSNT_03159___ 1009 GTATCATCTATATCAAGATTGAGTACGGCAGGATATTGGAATGTCATGCA 1058
||..|||||.|.|||||..||||..|.||||||||.|||||..|||||..
BL01448___cwl 1069 GTTACATCTGTCTCAAGGCTGAGCGCAGCAGGATACTGGAACATCATGTC 1118
BSNT_03159___ 1059 GAAAGTCAGCCAGCCGTCAGTAGGAGACTTTGTCTTCTTTACCACATATA 1108
|..||||||||||||.|||..|||.||.|||||.|||||..|.|||||||
BL01448___cwl 1119 GCCAGTCAGCCAGCCTTCAAGAGGTGATTTTGTTTTCTTCTCAACATATA 1168
BSNT_03159___ 1109 AATCCGGCCCGTCTCATATGGGGATTTATCTAGGCGGCGGTGATTTTATT 1158
||.|.|||||.||.||..|.||.||||||.||||...|....|.|||||.
BL01448___cwl 1169 AAGCGGGCCCTTCACACGTCGGCATTTATTTAGGAAACAACAAGTTTATC 1218
BSNT_03159___ 1159 CATGCAAGCTCATCGGGCGT---------CGACATTTCCAATCTCAGCAA 1199
.||||.|.|...||.||||| ||||| |.|.|||
BL01448___cwl 1219 AATGCCAACGATTCCGGCGTCACCGTGAGCGACA---------TGAACAA 1259
BSNT_03159___ 1200 TTCGTATTGGAAACAGCGGTACTTGGGCGCAAGAAGTTAT---TTTTAA 1245
|||.||.|||||.|||||.||..|.|||||||.|.|.||| ||||||
BL01448___cwl 1260 TTCCTACTGGAAGCAGCGCTATCTCGGCGCAAAACGGTATTCATTTTAA 1308
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