Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03167 and BL01447
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_03167.1.5803.seq
# -bsequence dna-align/BL01447___yojG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03167-BL01447___yojG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03167-BL01447___yojG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03167
# 2: BL01447___yojG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 693
# Identity: 509/693 (73.4%)
# Similarity: 509/693 (73.4%)
# Gaps: 54/693 ( 7.8%)
# Score: 1884.0
#
#
#=======================================
BSNT_03167 1 ATGAAAGAACATGTACTAGTAATCCTGCCTCACCCTGATGATGAATCATA 50
||||||.|||||.||||.||.||||||||.||.||||||||||||||.|.
BL01447___yoj 1 ATGAAAAAACATTTACTCGTGATCCTGCCCCATCCTGATGATGAATCTTT 50
BSNT_03167 51 TGGAGTGGCAGGCCTCATTGCCTTAAACAGAAAAAAAGACATTCCCGT-- 98
.|||||.||.|||.|.||.|||||||||.|||||.||||||||||.||
BL01447___yoj 51 CGGAGTCGCCGGCTTGATCGCCTTAAACCGAAAAGAAGACATTCCTGTAA 100
BSNT_03167 99 --TACGTATGCCTG-CGCCACTTTAGGTGAAATGGGCAGAAATATGGGCG 145
||||..|||||| ||| |.||.||.|||||.|||||||||||.|
BL01447___yoj 101 CATACGCTTGCCTGACGC-----TGGGCGAGATGGGAAGAAATATGGGAG 145
BSNT_03167 146 ATCCATTTTTCGCGAATCGGGAAACGTTGCCGCTGCTAAGAAAACAAGAG 195
|.||..||||.||.||..|||||||..|.||||||||.|||||.||||||
BL01447___yoj 146 ACCCGCTTTTTGCCAACAGGGAAACCCTTCCGCTGCTCAGAAAGCAAGAG 195
BSNT_03167 196 CTCATCAATGCTTGCAAAGAAATGGATATCAATGACCTTCGTATGCTTGG 245
||.|||.|.||.||||..|||||||||.|..|.||..|.||.|||||.||
BL01447___yoj 196 CTGATCGACGCCTGCAGGGAAATGGATGTACAGGATTTGCGCATGCTCGG 245
BSNT_03167 246 ACTCCGTGACAAAACGCTCGAATTTGAAGACGATGAGTATTTAGCTGATA 295
|..|||.|||||||||||||||||.||.||.||.||..|..|.||.|||.
BL01447___yoj 246 ATACCGCGACAAAACGCTCGAATTCGAGGATGAAGAAAAACTGGCCGATC 295
BSNT_03167 296 TCATGGAAGAGATCATAGATGATGTAAAACCAAGTTTAATTGTCACATTT 345
..||.||.|...||||.|||||||||||.||.||..|..||||.||.|||
BL01447___yoj 296 AAATTGAGGCTGTCATCGATGATGTAAACCCGAGCCTTGTTGTGACGTTT 345
BSNT_03167 346 TATCCCGGACACGGTGTGCACCCTGACCATGATGCATGCGGGGAAGCGGT 395
||.|||||||||||.||.||.||||||||||||||||||||.|..|||||
BL01447___yoj 346 TACCCCGGACACGGCGTTCATCCTGACCATGATGCATGCGGTGCCGCGGT 395
BSNT_03167 396 TATCCGTGCATTATATCGCAAAAAGAAAGAAGACCGTCCGCG-----TAC 440
.|||.|.|||||||..||.|||||||||||.|||||.||||| ||
BL01447___yoj 396 CATCAGGGCATTATCGCGGAAAAAGAAAGAGGACCGGCCGCGCGTCTTA- 444
BSNT_03167 441 AATCTGCATGGCCATTACCCGCAACAGAGAAGAGGTTCTCGGCGAAG-CT 489
||||||||.||.||.|.|.||||.|||||||||||.||| ||| ||
BL01447___yoj 445 ----TGCATGGCTATCACTCACCACAGGGAAGAGGTTCTTGGC-AAGCCT 489
BSNT_03167 490 GATGTCGTGCTTGATATCAAAGAAGTAGCTGATATTAAAATGAATGCGTT 539
||.|||||.|||||||||||||||||.||.||||||||||||||.||.||
BL01447___yoj 490 GACGTCGTTCTTGATATCAAAGAAGTCGCGGATATTAAAATGAACGCTTT 539
BSNT_03167 540 AAGAGCTCACCGCA-----CACAAACAGAAGGCATGCTCAGAGAGCTTGA 584
||.|| |||| |.|||||||..|||.| .||||
BL01447___yoj 540 AAAAG-----CGCATAAATCCCAAACAGGCGGCCT----------TTTGA 574
BSNT_03167 585 AGAGAAATTGAAAAATAA-----------TGAACCTGTTATGGCAACATG 623
| ||||||.||.|||.|| .||.||.|||.|.|..|||||
BL01447___yoj 575 A-AGAAATAGAGAAAAAACTCGCCAATGGCGAGCCGGTTGTTGAGACATG 623
BSNT_03167 624 GTTTGAAGAAGAAATATATTGGACGTATCAATGGAATGATTAA 666
|||||||.|||||..||.||||||.||||||||||||||||||
BL01447___yoj 624 GTTTGAAAAAGAAGCATTTTGGACCTATCAATGGAATGATTAA 666
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