Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03169 and BL01445
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_03169.1.5803.seq
# -bsequence dna-align/BL01445.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03169-BL01445.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03169-BL01445.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03169
# 2: BL01445
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity: 182/315 (57.8%)
# Similarity: 182/315 (57.8%)
# Gaps: 75/315 (23.8%)
# Score: 510.5
#
#
#=======================================
BSNT_03169 1 ATGGACAATGATAAA---GAGATAGTGAAAGCCTATGCTTCACTTTGGAA 47
|||| || |||.|| |||.|..|..|.||.|||....|.||||||||
BL01445 1 ATGG-CA--GATGAACTGGAGCTTTTCCAGGCATATAAAACCCTTTGGAA 47
BSNT_03169 48 TAACCGATCTCTCGCACATGATGACGCAGAAGCGGTA--GCAG------- 88
.||||| ||||..|.||.||.| ||||
BL01445 48 AAACCG----------------GACGATGGAGGGGGAAGGCAGGGAGGCG 81
BSNT_03169 89 -------AGGCGATTGATCTTGAGCTGTTGGATAAACGA-------ACAC 124
|||||.|||||..||||||| ||||| ||.|
BL01445 82 CTTCATCAGGCGGTTGATGATGAGCTG-------AACGACCTCGGCACCC 124
BSNT_03169 125 ATCCAAGACTCCGAAAACCGATGCTGGAAAAATATTTTGCCGCGATTCAG 174
|||||||.|||.||||..|||.||..||||||||.|.|....|.||.|.|
BL01445 125 ATCCAAGGCTCAGAAAGACGAAGCACGAAAAATACTATCAATCAATCCGG 174
BSNT_03169 175 CGCATTGTGAATTCACAGCTCGAACCGGCTGTGAAAT----ATC-AGCTG 219
|||||.|||||||||||..|.||| |..||||| .|| |||||
BL01445 175 CGCATCGTGAATTCACAATTGGAA-----TCAGAAATGAAGCTCAAGCTG 219
BSNT_03169 220 GTCAAATTACATACAGAACG--TGCAGAGTATTT---AAAAGAAGAAAGA 264
.|..|||..|||||.||||| || ||||..|| |||.||||||||.
BL01445 220 ATTGAATGTCATACGGAACGATTG--GAGTTATTAACAAACGAAGAAAGC 267
BSNT_03169 265 GGGGAGCAATCATGA 279
.|||||.||
BL01445 268 AGGGAGTAA------ 276
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