Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03181 and BL01441

See Amino acid alignment / Visit BSNT_03181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence dna-align/BSNT_03181___yodB.1.5803.seq
#    -bsequence dna-align/BL01441___yodB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03181___yodB-BL01441___yodB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03181___yodB-BL01441___yodB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03181___yodB
# 2: BL01441___yodB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity:     245/346 (70.8%)
# Similarity:   245/346 (70.8%)
# Gaps:          32/346 ( 9.2%)
# Score: 847.5
# 
#
#=======================================

BSNT_03181___      1 GTGGGAAATACGATGTGCCCTAAAATGGAATCCGCATTCTCATTGCTGGG     50
                     .||||...|||.|||||.||||.|||||||.||||.||.||.||.||.||
BL01441___yod      1 TTGGGGTTTACAATGTGTCCTAGAATGGAAGCCGCCTTTTCTTTACTCGG     50

BSNT_03181___     51 AAAACGATGGAACGGTCTGATCATCCATGTGCTAATGGATGGGCCGAAAC    100
                     .|||||||||||.||.||||||||||||||..||.|||||||.||.||||
BL01441___yod     51 CAAACGATGGAATGGACTGATCATCCATGTATTATTGGATGGACCTAAAC    100

BSNT_03181___    101 GGTTTAAAGAGATAACGGAAACAATACCGATGATCAGCCAAAAAATGTTG    150
                     |.||||||||..|.||.||||..|||||||||||||||||.||||||.||
BL01441___yod    101 GATTTAAAGACTTGACTGAAATGATACCGATGATCAGCCAGAAAATGCTG    150

BSNT_03181___    151 GCAGAGCGCTTGAAGGAGCTTGAACA----AAACGAGATTGTCGAACGGC    196
                     ||.||.||.||.||.|||||.|||||    |||    ||.|||||.||.|
BL01441___yod    151 GCTGAACGTTTAAAAGAGCTCGAACACTGCAAA----ATAGTCGAGCGTC    196

BSNT_03181___    197 AGGTTCTCCCTGAAACGCCGGTCAAAGTCATCTA-CACGCTGACTGAAAA    245
                     |.||.|||||.|||||||||||.|||||.||||| || ..||||.||.||
BL01441___yod    197 AAGTGCTCCCGGAAACGCCGGTAAAAGTGATCTATCA-ATTGACAGACAA    245

BSNT_03181___    246 AGGAACAGCGCTTCAAGCTGTATTTCAA-GAGATGCAGGCATGGGCCGAT    294
                     .|||||.|||||..|..|||| ..|||| |||||.||..|.|||||||| 
BL01441___yod    246 GGGAACGGCGCTGGAGCCTGT-CCTCAAGGAGATACAAACCTGGGCCGA-    293

BSNT_03181___    295 CAATTTTGCGAGCCTGGTGACACAGTGTG-TGAAGAAGAGAAATAA    339
                              .|||         ||.|||| |...||||.||..|.|
BL01441___yod    294 ---------AAGC---------CATTGTGATCCGGAAGGGAGCTGA    321


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