Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03204 and BL01436
See
Amino acid alignment /
Visit
BSNT_03204 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_03204___yodL.1.5803.seq
# -bsequence dna-align/BL01436___yodL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03204___yodL-BL01436___yodL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03204___yodL-BL01436___yodL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03204___yodL
# 2: BL01436___yodL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity: 222/327 (67.9%)
# Similarity: 222/327 (67.9%)
# Gaps: 21/327 ( 6.4%)
# Score: 682.5
#
#
#=======================================
BSNT_03204___ 1 ---------ATGTT--ATCCGTGTTTAAAAAGAAGTCTTGTTCC-TATGA 38
||||| |.| ||||||||||.||| ||..|.|| |||||
BL01436___yod 1 TTGCCGTTAATGTTTCAAC--TGTTTAAAAAAAAG-CTGATACCTTATGA 47
BSNT_03204___ 39 CGTGACAATATTTCAGACACCCCGGTTTGGCGAAAAAAAGGGCTAC-AGA 87
.|||||.||.|||||.||.||..|.|||||.|||.|.|||||.||| |||
BL01436___yod 48 TGTGACGATTTTTCAAACGCCTTGCTTTGGTGAAGATAAGGGATACGAGA 97
BSNT_03204___ 88 -GCCGTCTATCGAACTGAACTGAACGGGAGCGATCATCAAGACGTGCTGA 136
| ||.||..||||.|||.|.|||||.||....|||.||||.||||||.
BL01436___yod 98 TG--GTTTACAGAACGGAAATAAACGGCAGAACCCATGAAGATGTGCTGG 145
BSNT_03204___ 137 AAAGAGCATTCTCTTTGTTTAATGTATTCGACACTGTTCCGAGTGATTAT 186
||.|..|.||.||....||.|||||.|..|||||.||.||||.|||||||
BL01436___yod 146 AACGGACGTTTTCCACTTTCAATGTTTATGACACGGTGCCGAATGATTAT 195
BSNT_03204___ 187 GATGCAAGATTTATGGCCACAGGGGACGTGATCCTGATTGATGAAGGCAG 236
.|.||.||||||.|.||.||.||.|||.|..|..|.||.||||||||.||
BL01436___yod 196 AAGGCGAGATTTCTTGCAACTGGCGACATCGTTTTAATCGATGAAGGAAG 245
BSNT_03204___ 237 AAAAGGGAAAACATATTATCAACTGCTTCCCGCCGGCTGGAGGAAAATCA 286
|||.||.|||||.||||||.|||||||..|..|.||.|||||.|||||||
BL01436___yod 246 AAAGGGAAAAACCTATTATAAACTGCTGTCTACGGGGTGGAGCAAAATCA 295
BSNT_03204___ 287 ATCGTCTGATTG-TACAAACGACATAA 312
|.|| |...||| |.||..|..|.|||
BL01436___yod 296 ACCG-CATTTTGCTGCAGTCTTCGTAA 321
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.