Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03206 and BL01434

See Amino acid alignment / Visit BSNT_03206 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_03206___yozD.1.5803.seq
#    -bsequence dna-align/BL01434___yozD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03206___yozD-BL01434___yozD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03206___yozD-BL01434___yozD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03206___yozD
# 2: BL01434___yozD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     141/177 (79.7%)
# Similarity:   141/177 (79.7%)
# Gaps:           6/177 ( 3.4%)
# Score: 572.5
# 
#
#=======================================

BSNT_03206___      1 ATGAAAGAAATAGATCTTGTGATTGATACGGAAGAAATCGCTGAATTTTT     50
                     |||||||||||.||.||..||||.|||||.||||||||||||||.|||||
BL01434___yoz      1 ATGAAAGAAATTGAACTGATGATAGATACAGAAGAAATCGCTGATTTTTT     50

BSNT_03206___     51 TTACAGAGAGCTTGCAAGACGGGGCTACATACCGAGTGAGGATGAGCTGT    100
                     |||...||||||..|||||.|.|||||||||||||..|||||.||.||||
BL01434___yoz     51 TTATCTAGAGCTGACAAGAAGAGGCTACATACCGAACGAGGACGAACTGT    100

BSNT_03206___    101 TTGAAATCGCTGATATCACCTTTGATTATTTGATAGAAAAATGTATGATA    150
                     |.|||||.||.||||||||||||||||||.||||.|.|||||||||||||
BL01434___yoz    101 TCGAAATTGCCGATATCACCTTTGATTATCTGATTGCAAAATGTATGATA    150

BSNT_03206___    151 AATGAAGAGCTGGATGAAGATGAGTGA    177
                     .||||      |.||..|||.||.|||
BL01434___yoz    151 GATGA------GCATATAGAGGATTGA    171


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