Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03209 and BL01433

See Amino acid alignment / Visit BSNT_03209 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_03209___yodN.1.5803.seq
#    -bsequence dna-align/BL01433___yodN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03209___yodN-BL01433___yodN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03209___yodN-BL01433___yodN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03209___yodN
# 2: BL01433___yodN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 710
# Identity:     516/710 (72.7%)
# Similarity:   516/710 (72.7%)
# Gaps:          58/710 ( 8.2%)
# Score: 1884.0
# 
#
#=======================================

BSNT_03209___      1 ATGAAGCAAAATAAACCGAAATTCCAAGTAGGGGATATCGTAGTCGTCAT     50
                     ||||||..|||....||.||||||.||||.||||||.|.||.||||||.|
BL01433___yod      1 ATGAAGTCAAACGCGCCTAAATTCAAAGTCGGGGATGTGGTCGTCGTCGT     50

BSNT_03209___     51 TATGTATGGAACAGTCGGCACCATCACAAAAGTACACCAAATTGATAAAC    100
                     .|||||.||.||.|||||.||.||.||||||||.||..||||.|||||.|
BL01433___yod     51 GATGTACGGGACGGTCGGAACGATTACAAAAGTTCATAAAATCGATAAGC    100

BSNT_03209___    101 ACTATCTTTATGAAGTCAATCATAACGAAGT--TTTATACTTTGAATCAT    148
                     |.|.|.|.|||||||||||||||||.|||||  |||||  ||.||..|.|
BL01433___yod    101 ATTTTTTGTATGAAGTCAATCATAATGAAGTGCTTTAT--TTCGAGACTT    148

BSNT_03209___    149 CTATTCAGCTTTATAAAGATTATGAGGGTGTCATTGTCGACATGGAGAAG    198
                     ||.||||.|||||.|||||||||||.||.|||||||||||.|.|||.|||
BL01433___yod    149 CTCTTCAACTTTACAAAGATTATGACGGGGTCATTGTCGATACGGAAAAG    198

BSNT_03209___    199 CTTGATATTGAGTATGAATTCCTTATTGGGGACGTTGTTTATGTAAAAGA    248
                     |||||.||.||.||||||||..|.||.||.||.||.||.|||||||||||
BL01433___yod    199 CTTGACATCGAATATGAATTTTTAATCGGAGATGTCGTCTATGTAAAAGA    248

BSNT_03209___    249 TTATGGAAAAGAACTCTTTCGCATTATCGGCCATAGAACAGAAATTTGGA    298
                     |||.||.||||||.|.|||...||.|.|||.||.|||||.||||||||||
BL01433___yod    249 TTACGGCAAAGAATTGTTTAAAATCACCGGGCACAGAACGGAAATTTGGA    298

BSNT_03209___    299 GATATTTAGAAGATGGCTGGGAAGATATCATTTATGAGCTGACCCGTTTA    348
                     |||||.|.||.|||||||||||||||||||||||.||||||||||||||.
BL01433___yod    299 GATATGTGGAGGATGGCTGGGAAGATATCATTTACGAGCTGACCCGTTTG    348

BSNT_03209___    349 AAGGATGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTGCT    398
                     ||.||.|||||.|||||||||||.||.|||||.|||.|.|||||.|||||
BL01433___yod    349 AAAGACGGAGAATGGCTTGAAACTGAAGAAGAAGATTTAACGCTCGTGCT    398

BSNT_03209___    399 TAGAAAATATGAAATGGACCAGTTTGTGCATCAGCTGTTGTTTGTCCATT    448
                     |||||..||.||||||||||||||.||.||||||||..|||||||.||||
BL01433___yod    399 TAGAACCTACGAAATGGACCAGTTCGTCCATCAGCTTCTGTTTGTTCATT    448

BSNT_03209___    449 ATGTCGGAGAAACTGGCCATGAGATCGGCGAA--GATATCGCATCGTCTG    496
                     |||||||.|||.|.||.||.|||.|.|..|||  ||||        ||||
BL01433___yod    449 ATGTCGGCGAAGCCGGACAAGAGCTTGATGAACCGATA--------TCTG    490

BSNT_03209___    497 -----CTCTTCTT--CAGTT-----TGAAGGCGATGATGAAGATCAAGAT    534
                          .|.||.||  ||.||     |||...|||.||..|.|||||.|| 
BL01433___yod    491 AAAAAGTGTTTTTGCCATTTTCTGGTGATTCCGAGGAGCAGGATCATGA-    539

BSNT_03209___    535 ACCCTTCACATCCTTGC----TGTGTCAATT------GTTGATGAGCTTC    574
                                    ||    |.||.||.||      ||.|||||.||.|
BL01433___yod    540 ---------------GCGCAATATGGCAGTTACTGTCGTGGATGAACTGC    574

BSNT_03209___    575 TGGATATTTATAATGACTACAAAATTCTGTACGAAATGTTTCATGATGAA    624
                     |.|||||.||.||||||||.|||.|..||||.|||||||||||.||||..
BL01433___yod    575 TTGATATCTACAATGACTATAAAGTATTGTATGAAATGTTTCAGGATGCG    624

BSNT_03209___    625 GAATATAAAGACATGATGATGTTTGTTTTGGAA--AGTTTAAAAGAGCAT    672
                     |||||||||||.||||||..||||||.||  ||  ||..|.|||||..||
BL01433___yod    625 GAATATAAAGATATGATGGAGTTTGTGTT--AAGCAGCCTGAAAGAATAT    672

BSNT_03209___    673 TTCAGTTAG-    681
                     ||||..| | 
BL01433___yod    673 TTCAAAT-GA    681


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