Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03212 and BL01431

See Amino acid alignment / Visit BSNT_03212 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_03212.1.5803.seq
#    -bsequence dna-align/BL01431.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03212-BL01431.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03212-BL01431.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03212
# 2: BL01431
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     196/305 (64.3%)
# Similarity:   196/305 (64.3%)
# Gaps:          49/305 (16.1%)
# Score: 593.5
# 
#
#=======================================

BSNT_03212         1 ATGAAAACATGCGAATGGTGCGGCGAGCTTGAAG-------CGGTGCCCG     43
                     |||||.|..||.|||||||||      ..|||||       ||     ||
BL01431            1 ATGAAGAAGTGTGAATGGTGC------AATGAAGAAAAAGCCG-----CG     39

BSNT_03212        44 GCAG---GAAC-ACGGTGTACTGGGAGCTCCCTGATGGAACGAGGGCTAT     89
                     ||||   |.|| .||||.||.||||||||.||.||.||.||||..||.||
BL01431           40 GCAGCCCGCACGGCGGTATATTGGGAGCTTCCCGACGGGACGAAAGCGAT     89

BSNT_03212        90 AGAACTGACAGACACCCCTGCCATGGTATGTTCTTCC------TGCGGTA    133
                     .|||.|.||.|||||.|||||..|||.|||      |      |||||.|
BL01431           90 TGAAATCACCGACACACCTGCGGTGGAATG------CGAAGGGTGCGGGA    133

BSNT_03212       134 TGACCTATCAAGAGGAAAACACGGTTA---AGGAGATTGAGGATCAGCTG    180
                     ||..||||||.||||   |||..||.|   .|||.|||||..||||||||
BL01431          134 TGGTCTATCAGGAGG---ACAGTGTCACCTGGGAAATTGAAAATCAGCTG    180

BSNT_03212       181 CTTTTAATTCAAACAAAAAAACTGCCTGAAAG--CCTGACATATCA-GCA    227
                     ||.||.|||.|.||||||||||||||  |..|  |.|..|||||.| || 
BL01431          181 CTCTTGATTGATACAAAAAAACTGCC--ATCGTCCGTTTCATATGATGC-    227

BSNT_03212       228 GCTCATGGAGACAGAAAGAATTTTGAAACGCAACTATTTTGACTTCTCCT    277
                     |||.|||.|.|||||..|.||..||||.||.||.||.||||||||.||||
BL01431          228 GCTGATGAAAACAGAGCGCATACTGAAGCGGAATTACTTTGACTTTTCCT    277

BSNT_03212       278 GA---    279
                     .|   
BL01431          278 CATGA    282


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