Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03219 and BL01428

See Amino acid alignment / Visit BSNT_03219 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence dna-align/BSNT_03219___yodQ.1.5803.seq
#    -bsequence dna-align/BL01428___yodQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03219___yodQ-BL01428___yodQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03219___yodQ-BL01428___yodQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03219___yodQ
# 2: BL01428___yodQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1343
# Identity:     926/1343 (69.0%)
# Similarity:   926/1343 (69.0%)
# Gaps:         112/1343 ( 8.3%)
# Score: 3019.5
# 
#
#=======================================

BSNT_03219___      1 ATGCAAGACATTGAAAGAAAAGTAATCGAGTGGCTTGATCAGCATTCGGC     50
                     |||.|..||||.||.||||||||...|||.|||.|.|||..||||..|..
BL01428___yod      1 ATGGAGAACATAGAGAGAAAAGTGTGCGATTGGATCGATTCGCATGAGCA     50

BSNT_03219___     51 CAAAGCCATTCGTCTTCTCAAAAGGCTCATTGGGGAAAAAAGCACATTGG    100
                     .|||||.|||||.|||.|.||||..|||.|.||.|||||||||||..|||
BL01428___yod     51 AAAAGCGATTCGCCTTTTGAAAAAACTCGTCGGAGAAAAAAGCACGATGG    100

BSNT_03219___    101 GGTCAGAGTTTAACGCCCAAGCTGTTGTGCTTGAAAAGCTGCGGCAATTT    150
                     |...|||.|||||||||||.||.||.||.||.||.||..||.|||||||.
BL01428___yod    101 GCCGAGAATTTAACGCCCAGGCCGTCGTCCTGGAGAAATTGAGGCAATTC    150

BSNT_03219___    151 CATATGGACATTGATGTATGGGAGCCAAGCATAAAGCAATTAAAACAGCA    200
                     .|....||.||.|||||.||||||||||||||||||||.||..|||||||
BL01428___yod    151 GAAGCTGAAATCGATGTCTGGGAGCCAAGCATAAAGCAGTTGGAACAGCA    200

BSNT_03219___    201 TCC-CTACTTTAAATCTAACCGATCCGATTTTCATGAGAGCCCGAATATC    249
                     ||| || .||||||||..||.||.|....|||.|.||.|||||||||||.
BL01428___yod    201 TCCGCT-GTTTAAATCAGACAGAACAAGCTTTAAAGAAAGCCCGAATATT    249

BSNT_03219___    250 GTGGC---TAAAAAAACGGGAGCCGGCGAAGGTAGGTCCCTGATTTTGAA    296
                     |.|||   |||||||   |||...||||..||.|..||.|||||.||.||
BL01428___yod    250 GCGGCTGTTAAAAAA---GGAAAGGGCGGCGGGAAATCGCTGATCTTAAA    296

BSNT_03219___    297 CGGCCATATCGATGTTGTGCCTGAAGGAAGCGTAAAGGATTGGAAGTATG    346
                     |||.||.||||||||.|||||||||||||.|..|||.||.|||.||...|
BL01428___yod    297 CGGACACATCGATGTCGTGCCTGAAGGAAACAGAAAAGACTGGGAGACGG    346

BSNT_03219___    347 AACCGTATCAAGC----TGTCGAAGAA--AACGGTAAAATATACGGCCGC    390
                     |.||.|.|| |||    ||| ||||.|  ..|||    |||||||||||.
BL01428___yod    347 AGCCTTTTC-AGCCGGTTGT-GAAGCAGGGGCGG----ATATACGGCCGA    390

BSNT_03219___    391 GGTTCAACGGATATGAAGGGAGGCAATACAGCCCTTCTTTTTGCTTTAGA    440
                     ||..||||.||.|||||.||.||||||||.||.|||.|..|.||..|.||
BL01428___yod    391 GGCACAACTGACATGAAAGGCGGCAATACCGCTCTTTTAATCGCGATGGA    440

BSNT_03219___    441 AGCCCTGCACGC-CTGCGATGTCAAACTGAAGGGAGA--TGTATTGTTTC    487
                     |||.|||.| || .||||..||..||||.||.|||||  | |||| ||||
BL01428___yod    441 AGCGCTGGA-GCAATGCGGGGTTCAACTAAAAGGAGACCT-TATT-TTTC    487

BSNT_03219___    488 AGAGTGTTGTAGATGAAGAGTGCGGCGGCGCCGGTACACTGTCCGCCATC    537
                     |.|||||.|||||.||.|||||.|||||.|||||.||.||..|.|||.|.
BL01428___yod    488 AAAGTGTCGTAGACGAGGAGTGTGGCGGAGCCGGGACGCTTGCGGCCGTA    537

BSNT_03219___    538 ATGAGAGGCTATCGTGCTGACGGGGCACTGATTCCTGAACCGACGAATAT    587
                     |||||.|||||....||.|||||.||..|||||||.||.|||||.|||||
BL01428___yod    538 ATGAGGGGCTACAAAGCGGACGGCGCTTTGATTCCCGAGCCGACAAATAT    587

BSNT_03219___    588 GAAACTATTTATTAAGCAGCAGGGTTCGATGTGGTTTCGGATCACTGT-G    636
                     ||||.|.||||||||.||||||||.||.||||||||..|.|||||.|| .
BL01428___yod    588 GAAAATGTTTATTAAACAGCAGGGCTCAATGTGGTTCAGAATCACGGTCA    637

BSNT_03219___    637 AAGGGATTATCCGCACATGGGGGCACACGCTATGAAGGGGTAAGCGCGAT    686
                     |||||.|| ||.||.||.||.||||||.|.||||||||.||.|||||.||
BL01428___yod    638 AAGGGCTT-TCTGCGCACGGCGGCACAAGATATGAAGGCGTCAGCGCCAT    686

BSNT_03219___    687 TGAAAAAAGCATGCACGTTA-TCACAGCGTTACAAGAGCTGGAGAAAGTC    735
                     .|||||||||||||..||.| ||| |.||.|.|...||||.||..|.|||
BL01428___yod    687 CGAAAAAAGCATGCTTGTCATTCA-ATCGCTCCGCCAGCTTGAACAGGTC    735

BSNT_03219___    736 CGCAATGCGAGAATTTCAGATCCGCTGTATGACAATATCCCAATACCGGT    785
                     .|.|||..||||||..|||||.|..||||||||||||||||.||.|||||
BL01428___yod    736 AGGAATAAGAGAATAACAGATTCTTTGTATGACAATATCCCGATTCCGGT    785

BSNT_03219___    786 ACCGGTGAATATCGGCACCATCTCAGGCGGTGCCTGGCCATCTTCAGTTG    835
                     .|||.|.||.||||||||.|||...||.||.||||||||.||.||.||||
BL01428___yod    786 CCCGATCAACATCGGCACGATCAACGGAGGCGCCTGGCCTTCGTCGGTTG    835

BSNT_03219___    836 CAGAC-CGTGTCGTCA-TAGAAGGGAGATGCGGAATTGCTCCCCATGAGA    883
                     |.||| || || |.|| |.|||||.||.||||||||.|||||      ||
BL01428___yod    836 CCGACACG-GT-GACACTGGAAGGAAGGTGCGGAATCGCTCC------GA    877

BSNT_03219___    884 A--AA----CAGAAGCTGTAAAACTTGAATTGGAAAACTGGCTGAAGGAT    927
                     |  ||    |.|||||.||..|....||..|.|||||||||||.||.|||
BL01428___yod    878 ACGAATCCCCTGAAGCCGTCCAGTCCGAGCTTGAAAACTGGCTCAACGAT    927

BSNT_03219___    928 TTAGAATACCATGACGAATGGTTTAAACGCCATCCCGTACAAGTCGAATG    977
                     .|..|.||||||||.|||||||||||.|.|.||||.||..|..|.|||||
BL01428___yod    928 CTTCAGTACCATGATGAATGGTTTAAGCACTATCCTGTTGATATAGAATG    977

BSNT_03219___    978 GTTTGGCGCTCA-ATGGCTGCCGAATGATTTACCTGATGATCATCCTTTA   1026
                     |||.||||| || .|||||.||.||.|||||..||||.||    ||.|.|
BL01428___yod    978 GTTCGGCGC-CATGTGGCTTCCTAACGATTTGGCTGAAGA----CCATGA   1022

BSNT_03219___   1027 ATTTCT-------GTGCTGCAATCAGCCTATCAAAAAATGAAACA-GACA   1068
                     |   ||       ||||||.||||.||||||||||..||    || |.||
BL01428___yod   1023 A---CTGACGAAAGTGCTGAAATCCGCCTATCAAACCAT----CACGGCA   1065

BSNT_03219___   1069 GAG---CCGATTATTGAGGCTTCCCCGTGGGGAACGGATGGAGGGCTTTT   1115
                     |||   |||.|.||.||.|||||||||||||..||.||.||.||..|.||
BL01428___yod   1066 GAGGCTCCGCTCATCGAAGCTTCCCCGTGGGCGACAGACGGCGGAATATT   1115

BSNT_03219___   1116 GTACCATGCAGGAGATACACCAGTAATCGTTTTCGGGCCGGGGGAAACAA   1165
                     ||..||.||.||||..||.||.||.|||||.|||||||||||.|||||.|
BL01428___yod   1116 GTCGCACGCCGGAGGCACCCCTGTCATCGTCTTCGGGCCGGGAGAAACGA   1165

BSNT_03219___   1166 AAACGGCTCATCAGGCCAATGAATACATTGAGGTTGAAGCCATGATAGAA   1215
                     |||.|||.||.|||||.||.|||||||||||....||.|||.||||..|.
BL01428___yod   1166 AAATGGCCCACCAGGCAAACGAATACATTGAAAAAGACGCCCTGATCCAG   1215

BSNT_03219___   1216 TCTGCTAAAATTATTGCA--CTTTTTGTCATGGATTGGTGCGGGCTTCAT   1263
                     ||.||.||.||.||  ||  ||.|||.|.|||.|||||||.|   .|.||
BL01428___yod   1216 TCAGCCAAGATCAT--CAGCCTGTTTATTATGAATTGGTGTG---ATTAT   1260

BSNT_03219___   1264 -ACAGATGGGGAGGATGCGGATGCTCAAGTCAATAAAGAGTAG   1305
                      |.||.||.                                  
BL01428___yod   1261 GAAAGGTGA----------------------------------   1269


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