Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03221 and BL01426
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence dna-align/BSNT_03221___yodS.1.5803.seq
# -bsequence dna-align/BL01426___yodS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03221___yodS-BL01426___yodS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03221___yodS-BL01426___yodS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03221___yodS
# 2: BL01426___yodS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 736
# Identity: 497/736 (67.5%)
# Similarity: 497/736 (67.5%)
# Gaps: 89/736 (12.1%)
# Score: 1584.0
#
#
#=======================================
BSNT_03221___ 1 ATGGCGCCATTTCAAAAAGCAATCAGCATTG-------ACACAGCAATTG 43
|||.|| ||..|.|| |||.| |.|||| |.| .||.||||
BL01426___yod 1 ATGACG--ATGCCGAA---CAAAC-GTATTGCTGTTGAAGA-TGCCATTG 43
BSNT_03221___ 44 CAGATGTTCGGGATG----GATCGGTTCTGATGTTTGGCGGTTTTGGGGG 89
|.|||.|....||.| ||.|| |.|||||||||||.||||||||
BL01426___yod 44 CCGATTTGAAAGACGAAGCGACCG----TCATGTTTGGCGGATTTGGGGG 89
BSNT_03221___ 90 AGTCGGGTCGCCTCCTTCATTGATTGAAGCGATATTGGACAGCGGTATAA 139
||||||.||.||.|||||.||.||....|||||.|||.|.|..||..|||
BL01426___yod 90 AGTCGGTTCACCGCCTTCTTTCATCCGGGCGATTTTGAAAAAAGGCGTAA 139
BSNT_03221___ 140 CGGATTTAACTGTGATTTGCAATGACGCCGG-TTTCCCGGATATAGGGAT 188
...|||||||.||.||.||||||||.||.|| |||||||| .||.|||||
BL01426___yod 140 AAAATTTAACGGTCATATGCAATGATGCAGGATTTCCCGG-CATCGGGAT 188
BSNT_03221___ 189 CGGCCCGCTTATTGTTAATCAACGGGTCAA-AACC-----------CTGA 226
|||||| .|||||| ||||| |||| ||||
BL01426___yod 189 CGGCCC-------ATTAATC-----GTCAATAACCGCGTAAGGCGGCTGA 226
BSNT_03221___ 227 TCGCCTCGCATATAGGTTCCAATCCTGTAGCCGGAAAACAGATGACAGAG 276
||||.||.|||||.|||||.|||||.||.||.||||||||.|||||.||.
BL01426___yod 227 TCGCTTCTCATATCGGTTCAAATCCCGTTGCGGGAAAACAAATGACCGAC 276
BSNT_03221___ 277 GGGACGT----TAGAGGTTCAATTTTCACCTCAGGGAACGCTTGCGGAAC 322
| || |.|..|||.|||||||.||.||.||.|||||.||.||||
BL01426___yod 277 G----GTTTTCTCGCCGTTGAATTTTCTCCGCAAGGTACGCTGGCCGAAC 322
BSNT_03221___ 323 GGATTCGCGCTGGCGGAGCGGGACTTGGCGGTATTTTAACCGATGTGGGC 372
|.|||||.||.|||||..|.||.||||||||.|||||.||||||.|.||.
BL01426___yod 323 GAATTCGTGCGGGCGGCACAGGTCTTGGCGGCATTTTGACCGATATCGGG 372
BSNT_03221___ 373 ATTGATAATCCAATGGTTTGCGAAAAAAAGGACATCGTAACAGTGGCGGG 422
||.||||||...|||||..||.||..||||.|.|||||..||.|
BL01426___yod 373 ATCGATAATGACATGGTGCGCCAAGGAAAGAATATCGTTTCATT------ 416
BSNT_03221___ 423 AAAACG-------ATA-CTTGATTGAAGAGGCGCTGACGGCTGATTTTGC 464
||||| ||| |||| ..||.||.||..|||..||.||.|..||
BL01426___yod 417 -AAACGGACGCGCATACCTTG-CCGAGGAAGCCTTGAGTGCGGAATACGC 464
BSNT_03221___ 465 TTTTATCAATGCTTACATTGCAGATGAATTCGGCAATCTAACGTATGACA 514
|||.||..|||...|.|..||.|||||||||||||||.|.|..||.||||
BL01426___yod 465 TTTCATTTATGGAAAAACCGCCGATGAATTCGGCAATATCATCTACGACA 514
BSNT_03221___ 515 AAACCGCGCGCAATATGAATCCGCTTATGGCAATGGCCGCCAGGA--GAA 562
||||.||.|||||.|||||.|||||||||||.|||||.|| .|| |.|
BL01426___yod 515 AAACGGCTCGCAACATGAACCCGCTTATGGCGATGGCTGC--TGATCGGA 562
BSNT_03221___ 563 CCTTTGCCGAAGCTGAGCGTATCGTTCCGATGGGGGAGATTTCTGAAGAA 612
|.||||||||.|..|||||.||||||||.||.||.|||.|...|||||||
BL01426___yod 563 CATTTGCCGAGGTCGAGCGGATCGTTCCCATTGGAGAGCTCGATGAAGAA 612
BSNT_03221___ 613 ATGATTGTCACACCGGGGGTTTTTGT-TAAGGGGGTTGTA--CGAAGCG- 658
...|||||.|||||.||.|||||||| .|||| |||| .|||.||
BL01426___yod 613 GAAATTGTAACACCCGGTGTTTTTGTCGAAGG----TGTAGCTGAAACGG 658
BSNT_03221___ 659 -AGGGAGTGAAGTGGAAATGGGCTTGGGAG---TAG 690
|||| |||||.||||||||||.||||||| |||
BL01426___yod 659 AAGGG-GTGAACTGGAAATGGGTTTGGGAGTCATAG 693
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