Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01524 and BL01420

See Amino acid alignment / Visit BSNT_01524 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence dna-align/BSNT_01524___prkA.1.5803.seq
#    -bsequence dna-align/BL01420___prkA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01524___prkA-BL01420___prkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01524___prkA-BL01420___prkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01524___prkA
# 2: BL01420___prkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1906
# Identity:    1528/1906 (80.2%)
# Similarity:  1528/1906 (80.2%)
# Gaps:          20/1906 ( 1.0%)
# Score: 6131.5
# 
#
#=======================================

BSNT_01524___      1 ATGGATATATTAAAGAAAATTGAACAGTACAGAGAGGAAGAGCAGCGGCT     50
                     ||||||||||||||.||.|||||||||||.|||||||||||||||||.||
BL01420___prk      1 ATGGATATATTAAAAAAGATTGAACAGTATAGAGAGGAAGAGCAGCGTCT     50

BSNT_01524___     51 GAAATGGGAAGGAACTTTCGCCGATTATTTGGAGATTATTAAAGAAAATC    100
                     |||||||||||||||.|||||.||.|||.||||.||..|.|.||||||||
BL01420___prk     51 GAAATGGGAAGGAACCTTCGCTGAATATCTGGAAATCGTAAGAGAAAATC    100

BSNT_01524___    101 CGATGGTCGCGCAATCTGCTCATTCTCGAGTTTTTAATATGATAAAAGAC    150
                     |||..||||||||||||||||||||.||.||||..||||||||.||||||
BL01420___prk    101 CGACTGTCGCGCAATCTGCTCATTCCCGCGTTTACAATATGATTAAAGAC    150

BSNT_01524___    151 AGCGGGATAGAGGAAATTGACGGACGCAAGAA---GTACAGTTTTTTTGA    197
                     |||||.||.||.||.|..||||   ||||.||   .|||||.||.|||||
BL01420___prk    151 AGCGGCATTGAAGAGAAAGACG---GCAAAAAAGTATACAGCTTCTTTGA    197

BSNT_01524___    198 CCGCGAGCTGTTCGGGCTTGAAGAATCTCTGGAGCGTCTTGTGGAAGAGT    247
                     |...||||||||.||.||||||||..||.||||.||.|||||.|||||.|
BL01420___prk    198 CAAAGAGCTGTTTGGTCTTGAAGAGCCTTTGGAACGCCTTGTTGAAGAAT    247

BSNT_01524___    248 ATTTTCATCCGGCTGCCAAACGTCTAGATGTCAGAAAGCGGATTCTATTG    297
                     |.|||||||||||.||.|||||.||.|||||||||||..|.||.||..|.
BL01420___prk    248 ACTTTCATCCGGCCGCGAAACGCCTTGATGTCAGAAAAAGAATCCTGCTT    297

BSNT_01524___    298 CTGATGGGGCCTGTGAGCGGCGGTAAATCCACGCTGGTCACGATGCTCAA    347
                     .|||||||||||||.|||||.||.|||||.||..|||||||.|||||.||
BL01420___prk    298 TTGATGGGGCCTGTCAGCGGGGGGAAATCGACTTTGGTCACCATGCTGAA    347

BSNT_01524___    348 AAAAGGTCTCGAAGCGTACACGCTGACAGATAATGGCGCTGTATATGCGA    397
                     ||..||.||.|||||.|||.|.||.||||||.|.||.|||||.|||||||
BL01420___prk    348 AAGGGGGCTTGAAGCATACTCTCTTACAGATGAAGGGGCTGTCTATGCGA    397

BSNT_01524___    398 TTAAAGGCTGCCCGATGCACGAGGACCCTCTACATTTAATCCCCCATCAT    447
                     ||||.||||||||.|||||.||.||.||.||.|||||||||||.||.|||
BL01420___prk    398 TTAAGGGCTGCCCAATGCATGAAGATCCGCTTCATTTAATCCCTCAGCAT    447

BSNT_01524___    448 TTACGCGATGACTTTTACAGAGAATACGGCATTAGAATAGAAGGAAGTCT    497
                     .|.||.||.||.|||||||..|||||||||||..|.||..||||||..||
BL01420___prk    448 CTGCGGGACGATTTTTACAATGAATACGGCATCCGCATTCAAGGAAACCT    497

BSNT_01524___    498 TTCTCCTTTAAATGTCATGAGGCTGGAGGAAGAGTACGGAGGAAGAATTG    547
                     .||.||.||.||..|.||||||||.||..|.||.|||||.||||||||.|
BL01420___prk    498 GTCCCCGTTGAACATGATGAGGCTTGAACAGGAATACGGCGGAAGAATAG    547

BSNT_01524___    548 AGGATGTGAAGGTGGAGCGCATCTTCTTTTCAGAAGATAAGCGTACGGGA    597
                     |.||.||||||||.||..|.|||||.||||||||.|||||.||.|||||.
BL01420___prk    548 AAGACGTGAAGGTTGAAAGAATCTTTTTTTCAGAGGATAAACGGACGGGG    597

BSNT_01524___    598 ATTGGAACATTCAGTCCCTCTGATCCGAAATCTCAGGATATCGCCGATTT    647
                     ||.||.||.||||||||.||.||.||.|||||.|||||||||||||||.|
BL01420___prk    598 ATCGGCACGTTCAGTCCGTCAGACCCTAAATCGCAGGATATCGCCGATCT    647

BSNT_01524___    648 GACGGGGAGTATTGATTTCTCAACAATCGCCGAGTACGGTTCAGAATCAG    697
                     ||||||.||.|||||||||||.||.||.|||||.|||||.||.|||||.|
BL01420___prk    648 GACGGGAAGCATTGATTTCTCGACGATTGCCGAATACGGATCGGAATCCG    697

BSNT_01524___    698 ATCCGCGCGCTTACCGGTTTGACGGAGAGCTGAATAAAGCGAACCGCGGG    747
                     ||||||||||.||||||||.||||||||..|.||.|||||||||.|.||.
BL01420___prk    698 ATCCGCGCGCATACCGGTTCGACGGAGAATTAAACAAAGCGAACAGAGGA    747

BSNT_01524___    748 ATGATGGAGTTTCAGGAGATGCTGAAATGTGATGAGAAATTTCTCTGGCA    797
                     ||||||||.||||||||.|||||||||||.|||||.|||||.||||||||
BL01420___prk    748 ATGATGGAATTTCAGGAAATGCTGAAATGCGATGAAAAATTCCTCTGGCA    797

BSNT_01524___    798 ---TTT---GCTTTCCTTGACACAGGAAGGGAATTTTAAAGCTGGGCGGT    841
                        |||   ||||      |||||||||||||||||.|||||.||.||||
BL01420___prk    798 CCTTTTATCGCTT------ACACAGGAAGGGAATTTCAAAGCGGGCCGGT    841

BSNT_01524___    842 TTGCGTTAATTTCTGCTGATGAGCTGATTGTGGCTCACACGAATGAAACG    891
                     |.|||.|.||.||.||.|||||..||||.||.||.||||||||||||||.
BL01420___prk    842 TCGCGCTCATCTCAGCGGATGAATTGATCGTAGCCCACACGAATGAAACC    891

BSNT_01524___    892 GAGTATCGCTCATTTATTTCTAATAAGAAGAATGAAGCCCTGCACTCGAG    941
                     ||.||.||.||||||||.||.||||||||.||.||.||.||.||.|||.|
BL01420___prk    892 GAATACCGTTCATTTATATCCAATAAGAAAAACGAGGCGCTCCATTCGCG    941

BSNT_01524___    942 AATCATCGTGATGCCGGTTCCTTATAATTTAAAAGTGTCAGAGGAAGAGA    991
                     .||.|||||.||||||.||||.||||||||||||||.||.||.||.||.|
BL01420___prk    942 GATTATCGTCATGCCGATTCCATATAATTTAAAAGTATCGGAAGAGGAAA    991

BSNT_01524___    992 GAATTTATGAAAAAATGATCGCTGAGAGCGATGTGGCGGATGTTCATATT   1041
                     ||||||||||.||||||||||||||.|||||||||.|.||||||||||||
BL01420___prk    992 GAATTTATGAGAAAATGATCGCTGAAAGCGATGTGTCTGATGTTCATATT   1041

BSNT_01524___   1042 GCCCCGCATACGTTGAAGGTCGCCGCGATGTTCTCAATCCTTACCCGGTT   1091
                     ||.|||||.|||.|.||.||.|||||||||||.|||||..|.||..||.|
BL01420___prk   1042 GCGCCGCACACGCTAAAAGTGGCCGCGATGTTTTCAATTTTGACAAGGCT   1091

BSNT_01524___   1092 AAAGGAACCGAAGCGGTCGGATATTGATCTGGTCAAGAAAATGAGACTGT   1141
                     .|||||.||||||.||||.||.||||||||.|||||.||||||||.||||
BL01420___prk   1092 GAAGGAGCCGAAGAGGTCAGACATTGATCTCGTCAAAAAAATGAGGCTGT   1141

BSNT_01524___   1142 ATGATGGAGAAAGTGTGGAAGGATATAATTCTGTCGACGTTGAGGATATG   1191
                     ||||.|||||.||.||.||||||||.|||||.|||||.||.||||||.||
BL01420___prk   1142 ATGACGGAGAGAGCGTTGAAGGATACAATTCAGTCGATGTCGAGGATTTG   1191

BSNT_01524___   1192 AAAAAAGAATATAATGATGAAGGTATGAGCGGCATTGATCCGCGGTACGT   1241
                     |||||||||||.|.|||||||||.||||||||.||.||||||||.||.||
BL01420___prk   1192 AAAAAAGAATACACTGATGAAGGAATGAGCGGAATCGATCCGCGTTATGT   1241

BSNT_01524___   1242 GATCAACCGGATATCTTCAACGATTATCAGAAAGAATATGGAATCGATTA   1291
                     .|||||||||||.||.||.|||||.|||.|.||.||||||||.|||||.|
BL01420___prk   1242 CATCAACCGGATCTCGTCGACGATCATCCGCAAAAATATGGAGTCGATCA   1291

BSNT_01524___   1292 ATTCTCTCGATGTCCTTCGTTCCTTAAAAGAAGGTCTTGATCAGCACCCA   1341
                     ||.|.|||||||||||.|||||.|||||||||||.||.|..|||||.||.
BL01420___prk   1292 ATGCGCTCGATGTCCTCCGTTCTTTAAAAGAAGGACTCGGCCAGCATCCG   1341

BSNT_01524___   1342 TCAATTTCAAGC-GAGGACAGGGAGCGGTATTTGAATTTTATTTCTGCCG   1390
                     ||.||||| .|| ||.|||.|.|||||.||||||||.||||||||.||||
BL01420___prk   1342 TCGATTTC-GGCAGAAGACCGCGAGCGCTATTTGAACTTTATTTCCGCCG   1390

BSNT_01524___   1391 CCCGCAAGGAATATGACGACATTGCGAAAAAGGAAGTTCAAAAAGCGTTT   1440
                     ||.|.||.||.||.|||||.||.|||||.||.|||||.||||||||||||
BL01420___prk   1391 CCAGAAAAGAGTACGACGAAATGGCGAAGAAAGAAGTCCAAAAAGCGTTT   1440

BSNT_01524___   1441 GTGTATTCGTATGAAGAATCAGCAAAAACACTTATGGACAATTACCTCGA   1490
                     ||.||.||.|||||.||.||.||.|||||.||.|||||||||||.||.||
BL01420___prk   1441 GTATACTCTTATGAGGAGTCGGCGAAAACGCTGATGGACAATTATCTTGA   1490

BSNT_01524___   1491 TAACGTAGAGGCTTATTGCAATAAAAACAAGCTTCGTGATCCTTTGACAG   1540
                     |||.||.||.||.||.||||||||||..|||||.||.|||||..||||||
BL01420___prk   1491 TAATGTCGAAGCGTACTGCAATAAAATTAAGCTCCGCGATCCGCTGACAG   1540

BSNT_01524___   1541 GAGAGGAAATGAACCCTGACGAAAAGCTGATGAGATCCATCGAAGAGCAG   1590
                     ||||.||.|||||.||.||.||||||||||||||.||.||.|||||.||.
BL01420___prk   1541 GAGAAGAGATGAATCCGGATGAAAAGCTGATGAGGTCAATAGAAGAACAA   1590

BSNT_01524___   1591 ATCGGCATTTCGGAAAACGCCAAAAAAGCGTTCCGCGAAGAAATTTTAAT   1640
                     |||||||||||.|||||.||.|||||.||.|||||.|||||||||.|.||
BL01420___prk   1591 ATCGGCATTTCCGAAAATGCGAAAAAGGCATTCCGAGAAGAAATTCTCAT   1640

BSNT_01524___   1641 CCGCATCTCAGCCTATGCGAGAAAAGGCAAGCGGTTTGATTACAATTCCC   1690
                     ||||||.||.||||||||.||||||||.|||||.||||||||.|||||||
BL01420___prk   1641 CCGCATTTCTGCCTATGCAAGAAAAGGGAAGCGATTTGATTATAATTCCC   1690

BSNT_01524___   1691 ATGAAAGACTGCGTGAAGCTATTCAGAAAAAGCTGTTTGCTGATCTGAAG   1740
                     ||||..|.||..|.|||||.||||||||||||||||||||.||..||||.
BL01420___prk   1691 ATGAGCGGCTCAGGGAAGCGATTCAGAAAAAGCTGTTTGCAGACTTGAAA   1740

BSNT_01524___   1741 GATGTCGTTAAAATTACGACCTCTACAAAAACGCCGGATGAACAGCAGCT   1790
                     ||||||||.|||||.|||||.||.||||||||||||||.|||||||||||
BL01420___prk   1741 GATGTCGTCAAAATCACGACGTCGACAAAAACGCCGGACGAACAGCAGCT   1790

BSNT_01524___   1791 GAAAAAGGTAAATGAAGTCGTGGCCCGTTTAATTGATGAGCACGGCTACA   1840
                     .||.||..|.||.||.|||||.||||||.|.|||||||||||||||||||
BL01420___prk   1791 CAAGAAAATCAACGAGGTCGTCGCCCGTCTCATTGATGAGCACGGCTACA   1840

BSNT_01524___   1841 ACTCGACGAGCGCCAATGAGCTGCTGAAATATGTCGGCAGCCTGCTGAAC   1890
                     |||||||.|||||.||.||.||..|.||||||||.||.|||.|..|.|||
BL01420___prk   1841 ACTCGACAAGCGCAAACGACCTCTTAAAATATGTAGGAAGCTTATTAAAC   1890

BSNT_01524___   1891 CGATAA   1896
                     ||.||.
BL01420___prk   1891 CGGTAG   1896


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