Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01524 and BL01420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01524___prkA.1.5803.seq
# -bsequence dna-align/BL01420___prkA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01524___prkA-BL01420___prkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01524___prkA-BL01420___prkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01524___prkA
# 2: BL01420___prkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1906
# Identity: 1528/1906 (80.2%)
# Similarity: 1528/1906 (80.2%)
# Gaps: 20/1906 ( 1.0%)
# Score: 6131.5
#
#
#=======================================
BSNT_01524___ 1 ATGGATATATTAAAGAAAATTGAACAGTACAGAGAGGAAGAGCAGCGGCT 50
||||||||||||||.||.|||||||||||.|||||||||||||||||.||
BL01420___prk 1 ATGGATATATTAAAAAAGATTGAACAGTATAGAGAGGAAGAGCAGCGTCT 50
BSNT_01524___ 51 GAAATGGGAAGGAACTTTCGCCGATTATTTGGAGATTATTAAAGAAAATC 100
|||||||||||||||.|||||.||.|||.||||.||..|.|.||||||||
BL01420___prk 51 GAAATGGGAAGGAACCTTCGCTGAATATCTGGAAATCGTAAGAGAAAATC 100
BSNT_01524___ 101 CGATGGTCGCGCAATCTGCTCATTCTCGAGTTTTTAATATGATAAAAGAC 150
|||..||||||||||||||||||||.||.||||..||||||||.||||||
BL01420___prk 101 CGACTGTCGCGCAATCTGCTCATTCCCGCGTTTACAATATGATTAAAGAC 150
BSNT_01524___ 151 AGCGGGATAGAGGAAATTGACGGACGCAAGAA---GTACAGTTTTTTTGA 197
|||||.||.||.||.|..|||| ||||.|| .|||||.||.|||||
BL01420___prk 151 AGCGGCATTGAAGAGAAAGACG---GCAAAAAAGTATACAGCTTCTTTGA 197
BSNT_01524___ 198 CCGCGAGCTGTTCGGGCTTGAAGAATCTCTGGAGCGTCTTGTGGAAGAGT 247
|...||||||||.||.||||||||..||.||||.||.|||||.|||||.|
BL01420___prk 198 CAAAGAGCTGTTTGGTCTTGAAGAGCCTTTGGAACGCCTTGTTGAAGAAT 247
BSNT_01524___ 248 ATTTTCATCCGGCTGCCAAACGTCTAGATGTCAGAAAGCGGATTCTATTG 297
|.|||||||||||.||.|||||.||.|||||||||||..|.||.||..|.
BL01420___prk 248 ACTTTCATCCGGCCGCGAAACGCCTTGATGTCAGAAAAAGAATCCTGCTT 297
BSNT_01524___ 298 CTGATGGGGCCTGTGAGCGGCGGTAAATCCACGCTGGTCACGATGCTCAA 347
.|||||||||||||.|||||.||.|||||.||..|||||||.|||||.||
BL01420___prk 298 TTGATGGGGCCTGTCAGCGGGGGGAAATCGACTTTGGTCACCATGCTGAA 347
BSNT_01524___ 348 AAAAGGTCTCGAAGCGTACACGCTGACAGATAATGGCGCTGTATATGCGA 397
||..||.||.|||||.|||.|.||.||||||.|.||.|||||.|||||||
BL01420___prk 348 AAGGGGGCTTGAAGCATACTCTCTTACAGATGAAGGGGCTGTCTATGCGA 397
BSNT_01524___ 398 TTAAAGGCTGCCCGATGCACGAGGACCCTCTACATTTAATCCCCCATCAT 447
||||.||||||||.|||||.||.||.||.||.|||||||||||.||.|||
BL01420___prk 398 TTAAGGGCTGCCCAATGCATGAAGATCCGCTTCATTTAATCCCTCAGCAT 447
BSNT_01524___ 448 TTACGCGATGACTTTTACAGAGAATACGGCATTAGAATAGAAGGAAGTCT 497
.|.||.||.||.|||||||..|||||||||||..|.||..||||||..||
BL01420___prk 448 CTGCGGGACGATTTTTACAATGAATACGGCATCCGCATTCAAGGAAACCT 497
BSNT_01524___ 498 TTCTCCTTTAAATGTCATGAGGCTGGAGGAAGAGTACGGAGGAAGAATTG 547
.||.||.||.||..|.||||||||.||..|.||.|||||.||||||||.|
BL01420___prk 498 GTCCCCGTTGAACATGATGAGGCTTGAACAGGAATACGGCGGAAGAATAG 547
BSNT_01524___ 548 AGGATGTGAAGGTGGAGCGCATCTTCTTTTCAGAAGATAAGCGTACGGGA 597
|.||.||||||||.||..|.|||||.||||||||.|||||.||.|||||.
BL01420___prk 548 AAGACGTGAAGGTTGAAAGAATCTTTTTTTCAGAGGATAAACGGACGGGG 597
BSNT_01524___ 598 ATTGGAACATTCAGTCCCTCTGATCCGAAATCTCAGGATATCGCCGATTT 647
||.||.||.||||||||.||.||.||.|||||.|||||||||||||||.|
BL01420___prk 598 ATCGGCACGTTCAGTCCGTCAGACCCTAAATCGCAGGATATCGCCGATCT 647
BSNT_01524___ 648 GACGGGGAGTATTGATTTCTCAACAATCGCCGAGTACGGTTCAGAATCAG 697
||||||.||.|||||||||||.||.||.|||||.|||||.||.|||||.|
BL01420___prk 648 GACGGGAAGCATTGATTTCTCGACGATTGCCGAATACGGATCGGAATCCG 697
BSNT_01524___ 698 ATCCGCGCGCTTACCGGTTTGACGGAGAGCTGAATAAAGCGAACCGCGGG 747
||||||||||.||||||||.||||||||..|.||.|||||||||.|.||.
BL01420___prk 698 ATCCGCGCGCATACCGGTTCGACGGAGAATTAAACAAAGCGAACAGAGGA 747
BSNT_01524___ 748 ATGATGGAGTTTCAGGAGATGCTGAAATGTGATGAGAAATTTCTCTGGCA 797
||||||||.||||||||.|||||||||||.|||||.|||||.||||||||
BL01420___prk 748 ATGATGGAATTTCAGGAAATGCTGAAATGCGATGAAAAATTCCTCTGGCA 797
BSNT_01524___ 798 ---TTT---GCTTTCCTTGACACAGGAAGGGAATTTTAAAGCTGGGCGGT 841
||| |||| |||||||||||||||||.|||||.||.||||
BL01420___prk 798 CCTTTTATCGCTT------ACACAGGAAGGGAATTTCAAAGCGGGCCGGT 841
BSNT_01524___ 842 TTGCGTTAATTTCTGCTGATGAGCTGATTGTGGCTCACACGAATGAAACG 891
|.|||.|.||.||.||.|||||..||||.||.||.||||||||||||||.
BL01420___prk 842 TCGCGCTCATCTCAGCGGATGAATTGATCGTAGCCCACACGAATGAAACC 891
BSNT_01524___ 892 GAGTATCGCTCATTTATTTCTAATAAGAAGAATGAAGCCCTGCACTCGAG 941
||.||.||.||||||||.||.||||||||.||.||.||.||.||.|||.|
BL01420___prk 892 GAATACCGTTCATTTATATCCAATAAGAAAAACGAGGCGCTCCATTCGCG 941
BSNT_01524___ 942 AATCATCGTGATGCCGGTTCCTTATAATTTAAAAGTGTCAGAGGAAGAGA 991
.||.|||||.||||||.||||.||||||||||||||.||.||.||.||.|
BL01420___prk 942 GATTATCGTCATGCCGATTCCATATAATTTAAAAGTATCGGAAGAGGAAA 991
BSNT_01524___ 992 GAATTTATGAAAAAATGATCGCTGAGAGCGATGTGGCGGATGTTCATATT 1041
||||||||||.||||||||||||||.|||||||||.|.||||||||||||
BL01420___prk 992 GAATTTATGAGAAAATGATCGCTGAAAGCGATGTGTCTGATGTTCATATT 1041
BSNT_01524___ 1042 GCCCCGCATACGTTGAAGGTCGCCGCGATGTTCTCAATCCTTACCCGGTT 1091
||.|||||.|||.|.||.||.|||||||||||.|||||..|.||..||.|
BL01420___prk 1042 GCGCCGCACACGCTAAAAGTGGCCGCGATGTTTTCAATTTTGACAAGGCT 1091
BSNT_01524___ 1092 AAAGGAACCGAAGCGGTCGGATATTGATCTGGTCAAGAAAATGAGACTGT 1141
.|||||.||||||.||||.||.||||||||.|||||.||||||||.||||
BL01420___prk 1092 GAAGGAGCCGAAGAGGTCAGACATTGATCTCGTCAAAAAAATGAGGCTGT 1141
BSNT_01524___ 1142 ATGATGGAGAAAGTGTGGAAGGATATAATTCTGTCGACGTTGAGGATATG 1191
||||.|||||.||.||.||||||||.|||||.|||||.||.||||||.||
BL01420___prk 1142 ATGACGGAGAGAGCGTTGAAGGATACAATTCAGTCGATGTCGAGGATTTG 1191
BSNT_01524___ 1192 AAAAAAGAATATAATGATGAAGGTATGAGCGGCATTGATCCGCGGTACGT 1241
|||||||||||.|.|||||||||.||||||||.||.||||||||.||.||
BL01420___prk 1192 AAAAAAGAATACACTGATGAAGGAATGAGCGGAATCGATCCGCGTTATGT 1241
BSNT_01524___ 1242 GATCAACCGGATATCTTCAACGATTATCAGAAAGAATATGGAATCGATTA 1291
.|||||||||||.||.||.|||||.|||.|.||.||||||||.|||||.|
BL01420___prk 1242 CATCAACCGGATCTCGTCGACGATCATCCGCAAAAATATGGAGTCGATCA 1291
BSNT_01524___ 1292 ATTCTCTCGATGTCCTTCGTTCCTTAAAAGAAGGTCTTGATCAGCACCCA 1341
||.|.|||||||||||.|||||.|||||||||||.||.|..|||||.||.
BL01420___prk 1292 ATGCGCTCGATGTCCTCCGTTCTTTAAAAGAAGGACTCGGCCAGCATCCG 1341
BSNT_01524___ 1342 TCAATTTCAAGC-GAGGACAGGGAGCGGTATTTGAATTTTATTTCTGCCG 1390
||.||||| .|| ||.|||.|.|||||.||||||||.||||||||.||||
BL01420___prk 1342 TCGATTTC-GGCAGAAGACCGCGAGCGCTATTTGAACTTTATTTCCGCCG 1390
BSNT_01524___ 1391 CCCGCAAGGAATATGACGACATTGCGAAAAAGGAAGTTCAAAAAGCGTTT 1440
||.|.||.||.||.|||||.||.|||||.||.|||||.||||||||||||
BL01420___prk 1391 CCAGAAAAGAGTACGACGAAATGGCGAAGAAAGAAGTCCAAAAAGCGTTT 1440
BSNT_01524___ 1441 GTGTATTCGTATGAAGAATCAGCAAAAACACTTATGGACAATTACCTCGA 1490
||.||.||.|||||.||.||.||.|||||.||.|||||||||||.||.||
BL01420___prk 1441 GTATACTCTTATGAGGAGTCGGCGAAAACGCTGATGGACAATTATCTTGA 1490
BSNT_01524___ 1491 TAACGTAGAGGCTTATTGCAATAAAAACAAGCTTCGTGATCCTTTGACAG 1540
|||.||.||.||.||.||||||||||..|||||.||.|||||..||||||
BL01420___prk 1491 TAATGTCGAAGCGTACTGCAATAAAATTAAGCTCCGCGATCCGCTGACAG 1540
BSNT_01524___ 1541 GAGAGGAAATGAACCCTGACGAAAAGCTGATGAGATCCATCGAAGAGCAG 1590
||||.||.|||||.||.||.||||||||||||||.||.||.|||||.||.
BL01420___prk 1541 GAGAAGAGATGAATCCGGATGAAAAGCTGATGAGGTCAATAGAAGAACAA 1590
BSNT_01524___ 1591 ATCGGCATTTCGGAAAACGCCAAAAAAGCGTTCCGCGAAGAAATTTTAAT 1640
|||||||||||.|||||.||.|||||.||.|||||.|||||||||.|.||
BL01420___prk 1591 ATCGGCATTTCCGAAAATGCGAAAAAGGCATTCCGAGAAGAAATTCTCAT 1640
BSNT_01524___ 1641 CCGCATCTCAGCCTATGCGAGAAAAGGCAAGCGGTTTGATTACAATTCCC 1690
||||||.||.||||||||.||||||||.|||||.||||||||.|||||||
BL01420___prk 1641 CCGCATTTCTGCCTATGCAAGAAAAGGGAAGCGATTTGATTATAATTCCC 1690
BSNT_01524___ 1691 ATGAAAGACTGCGTGAAGCTATTCAGAAAAAGCTGTTTGCTGATCTGAAG 1740
||||..|.||..|.|||||.||||||||||||||||||||.||..||||.
BL01420___prk 1691 ATGAGCGGCTCAGGGAAGCGATTCAGAAAAAGCTGTTTGCAGACTTGAAA 1740
BSNT_01524___ 1741 GATGTCGTTAAAATTACGACCTCTACAAAAACGCCGGATGAACAGCAGCT 1790
||||||||.|||||.|||||.||.||||||||||||||.|||||||||||
BL01420___prk 1741 GATGTCGTCAAAATCACGACGTCGACAAAAACGCCGGACGAACAGCAGCT 1790
BSNT_01524___ 1791 GAAAAAGGTAAATGAAGTCGTGGCCCGTTTAATTGATGAGCACGGCTACA 1840
.||.||..|.||.||.|||||.||||||.|.|||||||||||||||||||
BL01420___prk 1791 CAAGAAAATCAACGAGGTCGTCGCCCGTCTCATTGATGAGCACGGCTACA 1840
BSNT_01524___ 1841 ACTCGACGAGCGCCAATGAGCTGCTGAAATATGTCGGCAGCCTGCTGAAC 1890
|||||||.|||||.||.||.||..|.||||||||.||.|||.|..|.|||
BL01420___prk 1841 ACTCGACAAGCGCAAACGACCTCTTAAAATATGTAGGAAGCTTATTAAAC 1890
BSNT_01524___ 1891 CGATAA 1896
||.||.
BL01420___prk 1891 CGGTAG 1896
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