Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04503 and BL01419
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04503___glgB.1.5803.seq
# -bsequence dna-align/BL01419___glgB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04503___glgB-BL01419___glgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04503___glgB-BL01419___glgB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04503___glgB
# 2: BL01419___glgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1973
# Identity: 1331/1973 (67.5%)
# Similarity: 1331/1973 (67.5%)
# Gaps: 178/1973 ( 9.0%)
# Score: 4187.5
#
#
#=======================================
BSNT_04503___ 1 ATGGCCGCTGCCAG---CCCGACAGCACATGATGTT------TATCTTTT 41
|||||.|.||..|| |.|| |||.|| .||||.||
BL01419___glg 1 ATGGCTGGTGTGAGTGCCTCG---------GATATTAAAGCGCATCTCTT 41
BSNT_04503___ 42 TCACGAAGGCAGTCTGTTTAAAAGCTATCA-GCTGTTTGGCTCGCATTA- 89
|||.|||||..|.||.|.|.||||||| || |.|.||.|||.|.|||.|
BL01419___glg 42 TCATGAAGGTCGGCTTTATGAAAGCTA-CAGGTTCTTCGGCGCTCATCAG 90
BSNT_04503___ 90 CCGCGAGCTGAATGG----CAAAAGCGGATATGAATTCTGTGTGTGGGCG 135
.|| ||.|.|.|.|| ||| ||.|.....||||||||.|||||.
BL01419___glg 91 ACG-GAACAGGACGGCCGCCAA----GGCTTCCGTTTCTGTGTTTGGGCC 135
BSNT_04503___ 136 CCTCATGCGTCGGAAGTACGAGTGGCTGGAGATTTTAACAGCTGGTCTGG 185
||.||||||..|||.||.|||.|.||.|||...||||||.|||||||.||
BL01419___glg 136 CCGCATGCGAAGGAGGTTCGAATCGCCGGAACGTTTAACGGCTGGTCCGG 185
BSNT_04503___ 186 AGAAGAGCATGTGATGCACAGAGTGAA------TGAT----AATGGCATT 225
|||..|||||.||.||.| |.|| || |||||.
BL01419___glg 186 ---------TGTCCTGCACCGAATGGAAAAGCGTCATCAGGAA-GGCATA 225
BSNT_04503___ 226 TGG--ACGTTATTTATTCCAGGTATAGGAGAAAAGGAACGATATAAATAT 273
||| || |.|||||.||.|||||.||||||..|||.|..|||||||||
BL01419___glg 226 TGGGAAC--TGTTTATCCCCGGTATTGGAGAAGGGGAGCTGTATAAATAT 273
BSNT_04503___ 274 GAAATCGTGA------CGAAT--AACGGTGAGATCAGGCTGAAGGCAGAT 315
|||||..|.| |.||| ||| ||.|| |||||||.|||
BL01419___glg 274 GAAATGATTACAGCCGCAAATGAAAC---GAAAT-----TGAAGGCTGAT 315
BSNT_04503___ 316 CCATACGCTATTTATTCAGAAGTCAGACCAAACACAGCGTCACTTACTTA 365
||.||.|||.|||.|||.|||||.||.||.||.||.||.||..|.|||||
BL01419___glg 316 CCTTATGCTTTTTTTTCTGAAGTGAGGCCGAAAACGGCATCGGTCACTTA 365
BSNT_04503___ 366 CGATTTGGAAGGATACAGCTGGCAAGATCAAAAATGGCAAAAGAAACAGA 415
..|.||||..||||||...|||...||.|..||.||||||||||||.||.
BL01419___glg 366 TCAATTGGCCGGATACCAATGGGGCGACCGGAAGTGGCAAAAGAAAAAGC 415
BSNT_04503___ 416 AGGCTAAGACGC--TGTATGAAAAACCTGTTTTCATTTATGAACTGCATC 463
|| .||.|.|| |||||||||||||..|||.|||.||.||.||.|||.
BL01419___glg 416 AG--CAAAAAGCCGTGTATGAAAAACCGATTTCCATCTACGAGCTTCATA 463
BSNT_04503___ 464 TTGGGTCTTGGAAGAAGCATTCTGATGGCAGGCATTATTCCTATATA--- 510
|.||.||.|||||.|||.|..|.|||| |.|.||.||.| |.|||
BL01419___glg 464 TCGGTTCGTGGAAAAAGAAAGCGGATG---GACGTTTTTTC-ACATACCG 509
BSNT_04503___ 511 -GAATTAAGTCAGACGCTTATCCCTTATATCAAGGAGCATGGGTTTACCC 559
|||.|.||..|.|||.|.||.|||||..||||.||.||.||.||.||.|
BL01419___glg 510 GGAACTGAGCGAAACGGTCATTCCTTACGTCAAAGAACACGGATTCACAC 559
BSNT_04503___ 560 ATATTGAACTGCTTCCGGTGTATGAGCATCCATATGATCGTTCATGGGGG 609
||||.||.|||.|.|||.||...|||||.||.|.|||.|||||||||||.
BL01419___glg 560 ATATCGAGCTGATGCCGCTGACAGAGCACCCGTTTGACCGTTCATGGGGC 609
BSNT_04503___ 610 TACCAAGGAACGGGGTATTACAGCCCGACAAGCAGGTTTGGCACGCCGCA 659
|||||...|||.|||||.|||||.|||||.|||||.|.||||...|||||
BL01419___glg 610 TACCAGACAACAGGGTACTACAGTCCGACGAGCAGATATGGCGAACCGCA 659
BSNT_04503___ 660 TGATCTGATGAAGTTTGTTGATGAATGTCATCAACAAAATATCGGAGTCA 709
|||..|||||.|.||..|.||..|.||.|||||.||..|.|||||.||||
BL01419___glg 660 TGACTTGATGTATTTCATCGACCAGTGCCATCAGCATGAGATCGGCGTCA 709
BSNT_04503___ 710 TTTTGGATTGGGTCCCCGGACATTTTTGTAAAGATGCACATGGCCTTTAT 759
||.||||||||||..||||.||||||||.|||||||..||.|||.|.|||
BL01419___glg 710 TTATGGATTGGGTTTCCGGCCATTTTTGCAAAGATGACCACGGCTTGTAT 759
BSNT_04503___ 760 ATGTTTGATGGAGAACCGCTTTATGAATACAAAGAAGAACGTGATCGGGA 809
.|||||||.||....||.||.||||||||.|||.|.||.|.|||..||||
BL01419___glg 760 TTGTTTGACGGTATGCCTCTGTATGAATATAAACACGAGCATGACAGGGA 809
BSNT_04503___ 810 GAACTGGTTATGGGGCACGGCAAACTTTGACCTGGGAAAACCGGAAGTTC 859
.||.|||..||||||.||.||.||.||||||||.|||||||..|||||||
BL01419___glg 810 AAATTGGGAATGGGGGACCGCCAATTTTGACCTCGGAAAACGAGAAGTTC 859
BSNT_04503___ 860 ATAGTTTTTTAATTTCGAATGCGTTGTACTGGGCGGAATTCTATCATATA 909
|.|||||||||||.||||||||||||||.|||...||..|.|||||||||
BL01419___glg 860 ACAGTTTTTTAATCTCGAATGCGTTGTATTGGATCGAGATGTATCATATA 909
BSNT_04503___ 910 GATGGATTTAGGGTTGATGCAGTGGCTAATATCTTGTATTGGCCAAA--- 956
|||||||||.|.||.|||||.||.||.||..||.|||||||||||||
BL01419___glg 910 GATGGATTTCGAGTCGATGCGGTTGCGAACCTCCTGTATTGGCCAAACCG 959
BSNT_04503___ 957 ---TCAGGATGAACGCCACACGAATCCATATGCTGTTGAGTT----TTTA 999
||||..|||| ||.| ||| ||| |||.|.| ||||
BL01419___glg 960 TCCTCAGCCTGAA-GCGA-ACG---------GCT-TTGCGATCGAATTTA 997
BSNT_04503___ 1000 AAAAAAC--TCAATCAAACCA------TGAGAGAGGCATATC----CTTA 1037
...|||| |.|||.|| || ||..|.|| ||| |||.
BL01419___glg 998 TTCAAACGTTAAATGAA--CAGGTTTTTGCAAAAG----ATCCCCACTTT 1041
BSNT_04503___ 1038 TGTGATGATGATTGCGGAAGATTCTACAGAATGGCCTCAAGTGACAGGTG 1087
| ||||||||||.||.||.||.|||||.|||||.|..||||| |
BL01419___glg 1042 T----TGATGATTGCAGAGGACTCCACAGACTGGCCGCTTGTGAC----G 1083
BSNT_04503___ 1088 C------CGTTGAGGAAGGGGGGCTTGGTTTTCATTATAAATGGAATATG 1131
| |.| |.|||||.||.||.||.|||.|||||||.|||||||||
BL01419___glg 1084 CATCCGACCT--ATGAAGGCGGTCTCGGGTTTAATTATAAGTGGAATATG 1131
BSNT_04503___ 1132 GGATGGATGAATGACGTACTGAAATACATGGAGACGCCGCCCGAAGAAAG 1181
||.||||||||.||.|||.|.|..||.|||||..|..|.||.|||.||||
BL01419___glg 1132 GGTTGGATGAACGATGTATTAACCTATATGGAAGCTTCCCCAGAACAAAG 1181
BSNT_04503___ 1182 GCGGCA-TTGTCATCAGCTTATCTCTTTTTCATTACTATATGCGTTTAGT 1230
....|| .|| |||||.|||.|.||.||.||.|||.|.||||| .||.|
BL01419___glg 1182 AAAACACCTG-CATCATCTTGTTTCATTCTCCTTAATGTATGC--CTACT 1228
BSNT_04503___ 1231 --GAACATTTTGTATTGCCGTTTTCTCATGATGAAGTCGTATACGGAAAA 1278
|||.|||...|..|||||||.||.||.||||||||.||.|||.|.|||
BL01419___glg 1229 CAGAAAATTACATCCTGCCGTTCTCCCACGATGAAGTGGTGTACCGCAAA 1278
BSNT_04503___ 1279 AAATCACTTCTTAATAAAATGCCTGGCGACTACTGGCAGAAGTTTGCCCA 1328
||.||.||.|||.||||.|||||.|||||.||.||||||||.||.|||||
BL01419___glg 1279 AAGTCTCTGCTTCATAAGATGCCCGGCGATTATTGGCAGAAATTCGCCCA 1328
BSNT_04503___ 1329 GTATCGGCTTTTGCTGGGCTA---TATGACAGTGCATCCCGGAAAGAAAT 1375
|||.||.||..||.|..|.|| ||||| ||||.||.|||||.||..
BL01419___glg 1329 GTACCGCCTGCTGATCAGTTATTTTATGA---TGCACCCGGGAAAAAAGC 1375
BSNT_04503___ 1376 TGATCTTTATGGGATCAGAGTTTGCCCAATTTGATGAATGGAAAGATACA 1425
|..|.||||||||....||||||||.||||||||||||||||||||...|
BL01419___glg 1376 TTCTTTTTATGGGCGGTGAGTTTGCTCAATTTGATGAATGGAAAGACGAA 1425
BSNT_04503___ 1426 GAACAGCTTGATTGGTTTTTGGACTCCTTCCCCATGCATCAGAAAGCCAG 1475
|||.||||.|||||||||||||||...||...||||||.|..||||||.|
BL01419___glg 1426 GAAGAGCTCGATTGGTTTTTGGACGATTTTGACATGCACCGCAAAGCCCG 1475
BSNT_04503___ 1476 CGTTTTTACGCAAGACCTTCTCCGCTTTTACCAAAAAAGCAAAATCCTTT 1525
..|.|||||..|.||...|||.|.|.|.|||.||||||||...|||||.|
BL01419___glg 1476 AATGTTTACAAAGGAGGCTCTACACCTCTACAAAAAAAGCCGTATCCTGT 1525
BSNT_04503___ 1526 ATGAGCATGACCATCGTGCA-CAATCATTTGAATGGATTGATGTCCATAA 1574
||||..||||.||||| ||| |||..|||.||.||||||||.||..|.||
BL01419___glg 1526 ATGAAAATGATCATCG-GCAGCAAGGATTCGAGTGGATTGACGTTAACAA 1574
BSNT_04503___ 1575 TGACGAACAATCAATCTTTTCTTTTATTCGTTATGGCAAAAAGCACGGTG 1624
||..|||||.||.||..|.||.|||||.||.|||||.|||.|||.|||||
BL01419___glg 1575 TGCGGAACAGTCGATTGTATCGTTTATCCGCTATGGAAAACAGCCCGGTG 1624
BSNT_04503___ 1625 AGGCGCTTGTCATCATTTGTAATTTTACACCCGTGGTCTATCATCAATAT 1674
|.|||||..|.|||.|.||.|||||.||.||....||||||||..|||||
BL01419___glg 1625 AAGCGCTGATTATCGTCTGCAATTTCACGCCTTCCGTCTATCACGAATAT 1674
BSNT_04503___ 1675 GATGTTGGAGTTCCTTTTTTTACTCAATACATTGAAGTGCTTAACAGTGA 1724
...||.||.||.||||||...||..||||.||.||||||||||||||.||
BL01419___glg 1675 CGGGTCGGCGTCCCTTTTCAAACCGAATATATCGAAGTGCTTAACAGCGA 1724
BSNT_04503___ 1725 CAGTGAAACATATGGAGGGTCAGGGCAAATCAA--CAAAAAGCCGTTATC 1772
...||.||.|||.|||||.|||...|||||||| |||||.|||.|.|
BL01419___glg 1725 TGATGCAAAATACGGAGGTTCACACCAAATCAACCCAAAACGCCTTCA-- 1772
BSNT_04503___ 1773 GGCTAAAAAGGGAGCACTTC-------ATCATA-AGCCGTGTTATATCAC 1814
|||.|.|||.||.|..||.| |.|||| ||| ||||.
BL01419___glg 1773 GGCAAGAAAAGGCGTTCTGCACGGCAAACCATACAGC--------ATCAG 1814
BSNT_04503___ 1815 GATGACCATCC--CCCCTTACGGCATCT-CGATTTTACGGGCGGTTAAAA 1861
.|||||..||| ||.|| ||.|.|| ||.||||..|.||.||.||||
BL01419___glg 1815 CATGACAGTCCCTCCGCT---GGGAGCTGCGGTTTTCAGAGCAGTCAAAA 1861
BSNT_04503___ 1862 AAAGAGGAGAGATAAAAAGATGA 1884
|.|||||||.||.|||..|||||
BL01419___glg 1862 AGAGAGGAGCGAAAAAGGGATGA 1884
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