Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04499 and BL01415
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04499___glgP.1.5803.seq
# -bsequence dna-align/BL01415___glgP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04499___glgP-BL01415___glgP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04499___glgP-BL01415___glgP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04499___glgP
# 2: BL01415___glgP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2494
# Identity: 1773/2494 (71.1%)
# Similarity: 1773/2494 (71.1%)
# Gaps: 191/2494 ( 7.7%)
# Score: 5994.0
#
#
#=======================================
BSNT_04499___ 1 ATGTTCTCGAGTAAAGAACGCTTTGCAGACTTATTTTTAAAGCGTCTGGA 50
||||||||.|||||||||.|||||..|.|.|..|||||.||.|||.|.||
BL01415___glg 1 ATGTTCTCAAGTAAAGAAAGCTTTAAACAATGCTTTTTGAAACGTGTTGA 50
BSNT_04499___ 51 AATGACGTGCGGAAAAAGCTTTAAAGATTCTGTCAA-GCTGGATCAATAT 99
|..|..||||||||||||||||...||.||| |||| |||.||.||.|||
BL01415___glg 51 ACGGTTGTGCGGAAAAAGCTTTCGGGACTCT-TCAACGCTTGACCAGTAT 99
BSNT_04499___ 100 AAAACGTTGGGCAATATGGTCAGAGAGTATATCAGCGCTAATTGGATCGA 149
.|.|||.|.||||..||||||||.||..||||||||||.||.||||||||
BL01415___glg 100 CAGACGCTCGGCATCATGGTCAGGGAACATATCAGCGCAAACTGGATCGA 149
BSNT_04499___ 150 GACGAATGAAAAAAGCAGATC------AAATTCCGGGAAGCAGACATATT 193
|||.|||||||..|||.|.|| |||| ||.|||||.||||
BL01415___glg 150 GACCAATGAAAGGAGCCGCTCCAACCAAAAT------AAACAGACCTATT 193
BSNT_04499___ 194 ATTTATCAATCGAATTTCTGCTCGGTCAG-CTCCTTGAGCAAAACTTAAT 242
|.|||||.||.||.|||||.|| ||.||| ||.||.|..||||||.|..|
BL01415___glg 194 ACTTATCGATTGAGTTTCTCCT-GGGCAGACTGCTCGGCCAAAACCTCCT 242
BSNT_04499___ 243 GAATCTTGGTGTTCGTGATGTTGTAGAAGCTGGTTTAAAGGAAATCGGCA 292
.|||||.||.||||||||..||||..|||..|||.|.|..||..|.||||
BL01415___glg 243 CAATCTCGGGGTTCGTGAGATTGTCAAAGAAGGTCTTACCGAGCTTGGCA 292
BSNT_04499___ 293 TCAATTTAGAGGAGATCCTTCAGATAGAG------AACGATGCAGGTCTC 336
|...|.|.||.||.||| || |||| |..||||||||.||.
BL01415___glg 293 TTTGTCTTGAAGACATC-----GA-AGAGGCCGAAATGGATGCAGGCCTT 336
BSNT_04499___ 337 GGCAATGGCGGACTTGGGC--GCTTGGCCGCTTGCTTTTTAGATTCGCTT 384
|||||.||.||| |||||| || |.||.||.||||||||.|||||.||.
BL01415___glg 337 GGCAACGGGGGA-TTGGGCAGGC-TCGCGGCGTGCTTTTTGGATTCACTG 384
BSNT_04499___ 385 GCTTCGTTGAACCTGCCTGGGCACGGGATGGGCATACGTTATAAGCATGG 434
||||||.|..||||.||.|||||.||.|||||.||.||.||.||||||||
BL01415___glg 385 GCTTCGCTCGACCTTCCCGGGCATGGAATGGGGATTCGCTACAAGCATGG 434
BSNT_04499___ 435 TTTGTTTGAGCAAAAAATTGTAGACGGGCATCAGGTGGAGCTGCCTGAGC 484
.||.||.||.||||||||.||.|||||.|||||.||.||..|||||||.|
BL01415___glg 435 GTTTTTCGAACAAAAAATCGTCGACGGTCATCAAGTCGAATTGCCTGAAC 484
BSNT_04499___ 485 AATGGCTGAAAAACGGGAACGTATGGGAAGTAAGGAATGCGGATCAAGCA 534
|||||||.|||.|.||..||||||||||..|..|.||.||.|||||.||
BL01415___glg 485 AATGGCTCAAACATGGTTACGTATGGGAGATCCGCAACGCCGATCAGGC- 533
BSNT_04499___ 535 GTGGACGTG-CCGTTTTG--GGGCGAAGTCCATATGACAGAAAAAAGCGG 581
||...||| .|||||.| ||||| .|||.|.|||.|..|..||.|.||
BL01415___glg 534 -TGTTTGTGTTCGTTTCGGCGGGCG-GGTCAAGATGGCGCAGGAAGGAGG 581
BSNT_04499___ 582 GCGCCTGCATTTTCGCCACGAACAAGCGACAATTG-TTACCGCTGTTCCT 630
||||||.|..|||.|.||.|||.|.||| .||.|| |.||.||.||.|||
BL01415___glg 582 GCGCCTCCGCTTTTGGCAGGAAGATGCG-GAAGTGATGACAGCCGTGCCT 630
BSNT_04499___ 631 TATGATATCCCGATTATCGGCTATGAAAC--AGGCACTGTCAACACGTTA 678
.|.||.|||||.||.|||||||||||.|| || ||.||||||||..|.
BL01415___glg 631 CACGACATCCCAATCATCGGCTATGAGACCAAG--ACGGTCAACACCCTT 678
BSNT_04499___ 679 AGGCTTTGGAACGCCGAGCCCTATGCGCATTATCACG--GCGGTAATATT 726
.||||.|||||.||.|||||.|...|||...||||.| .|| ||||||
BL01415___glg 679 CGGCTGTGGAATGCGGAGCCTTGCTCGCTCCATCATGAACCG--AATATT 726
BSNT_04499___ 727 TTGTCTTATAAGCGAGAAACAGAAGCGGTTTCTGAATTCTTATATCCCGA 776
|||...||||||||.||.||||||||.||.|||||||.|.|.|||||.||
BL01415___glg 727 TTGAAGTATAAGCGCGAGACAGAAGCTGTATCTGAATGCCTGTATCCGGA 776
BSNT_04499___ 777 TGACACCCATGATGAGGGAAAAATTTTACGGCTGAAGCAGCAGTATTTTT 826
||||||.|||||.||.||.||.|||.|.||..||||||||||||||||||
BL01415___glg 777 TGACACGCATGACGAAGGCAAGATTCTCCGTTTGAAGCAGCAGTATTTTT 826
BSNT_04499___ 827 TAGTATGCGCAAGCTTAAAAAGCATTGTGAA---CAATTACCGAAAAACA 873
||||||..||||||.|..||||||||||||| |.|| ||.||||
BL01415___glg 827 TAGTATCGGCAAGCCTGCAAAGCATTGTGAAACGCTAT-----AAGAACA 871
BSNT_04499___ 874 CATAAATCTTTATCCGGC-CTGCAT----------AAAGAAGTGAGC-AT 911
| |.|.|||.| |||||| ||| |||| .|| ||
BL01415___glg 872 C--------TCACCCGTCACTGCATGATTTTCACCAAA-AAGT-CGCGAT 911
BSNT_04499___ 912 TCATATTAATGACACTCACCCTGCGCTT--GCGGTGCCTGAGCTGATGCG 959
.|||||.||||||||.||.|| ||||| ||||||||.||..|||||.|
BL01415___glg 912 CCATATCAATGACACCCATCC--CGCTTTGGCGGTGCCGGAATTGATGAG 959
BSNT_04499___ 960 GATTTTGCTCGATGAAGAGAACATGAGCTGGGAAGAAGCTTGGCATATCA 1009
.||||||||.||.|||||.||.||||..|||||.|||||.||||||.|.|
BL01415___glg 960 AATTTTGCTTGACGAAGAAAAAATGACGTGGGATGAAGCGTGGCATGTTA 1009
BSNT_04499___ 1010 CTGTACATACGATTTCTTATACAAATCATACAAC-ATTGTCAGAAGCGCT 1058
|.|||||||||||.||.|||||.||||||||.|| .||| |.||||||||
BL01415___glg 1010 CCGTACATACGATCTCATATACGAATCATACGACGCTTG-CCGAAGCGCT 1058
BSNT_04499___ 1059 CGAGAAATGGCCGATTCATTTGTTTAAGCCGCTGCTCCCGCGAATGTACA 1108
.||.||||||..|||..||||..||||.|||||.||.|||.||||.||.|
BL01415___glg 1059 GGAAAAATGGAGGATCGATTTAATTAAACCGCTTCTGCCGAGAATTTATA 1108
BSNT_04499___ 1109 TGATTATTGAAGAGATCAATGAGAGGTTTTGCCGC--GCAGTTTGGGAAA 1156
||||.|||||.||||||||||||.||||||||.|| || |.|||||||
BL01415___glg 1109 TGATCATTGAGGAGATCAATGAGCGGTTTTGCGGCTGGC--TGTGGGAAA 1156
BSNT_04499___ 1157 AGTATCCGGGAGACTGGAAAAGGATAGAGGA-CATGGCGATTACAGCGCA 1205
|.||.|||||.||.|||.|||||||.||..| |.||.|| |.|..||.||
BL01415___glg 1157 AATACCCGGGTGAATGGGAAAGGATCGAAAAGCTTGCCG-TCATCGCCCA 1205
BSNT_04499___ 1206 TGGTGTTGTCAAAATGGCTCATCTGGCCATAGTAGGCAGTTACAGTGTAA 1255
.||.|..||.||||||||.||..||||.||.||.|||||.||||||||.|
BL01415___glg 1206 CGGCGAAGTGAAAATGGCCCACTTGGCGATTGTCGGCAGCTACAGTGTTA 1255
BSNT_04499___ 1256 ATGGCGTTGCAAAAATACATTCCGA-TATATTAAAGGAAAGGGAGATGCG 1304
|.||.||.||.||.||.|||| ||| .||||||||.||..||||.|||..
BL01415___glg 1256 ACGGTGTCGCCAACATTCATT-CGACCATATTAAAAGAGCGGGAAATGAA 1304
BSNT_04499___ 1305 TGACTTTCA--CCTGCTGTTCCCGAATCGTTTT------AACAATAAGAC 1346
.||||||.| || .|.||||| |||| ||.|||||.||
BL01415___glg 1305 CGACTTTTATTCC--GTTTTCCC------TTTTAAATTCAATAATAAAAC 1346
BSNT_04499___ 1347 GAATGGAATTGCCCACAGGCGCTGGCTGTTAAAAGCGAATCCAG--GCTT 1394
|||.||.||..|.||.||..|.|||||||||||.||.||||| | ||||
BL01415___glg 1347 GAACGGCATCTCACATAGAAGGTGGCTGTTAAAGGCAAATCC-GCCGCTT 1395
BSNT_04499___ 1395 GTCTGCCATCATTACAGAGGCGATCGGCGATGAATGGGTCAAGCAGCCGG 1444
| |...|.|.||.||.||.|||||.||.||....|||.|.||..|.||||
BL01415___glg 1396 G-CGAACTTGATAACTGAAGCGATAGGAGACAGGTGGCTGAAAGATCCGG 1444
BSNT_04499___ 1445 AATCACT----GATC--CGTTTAGAACCGTACGCCACTGATCCTGCATTT 1488
||...|| |||| ||| ||.|..||.|..|||.|.||.|||
BL01415___glg 1445 AAAGCCTTCTGGATCTTCGT------CCATTTGCGAACGATTCCGCGTTT 1488
BSNT_04499___ 1489 ATTGAACAGTTTCAAAACAACAAAAGCAAGAA--AAAACAAGAGCTT--- 1533
.|.||...||||||...||..||||| .||| |||.| |||||
BL01415___glg 1489 CTCGAGTCGTTTCAGCGCATTAAAAG--GGAACGAAAGC---AGCTTTTG 1533
BSNT_04499___ 1534 GCCGATTTGATTTTTTGCACGGC-----CGGGGTGGTTGTGAACCCTGAC 1578
||.||..||| ||.|.||| |||..|.|..||.|||||||||
BL01415___glg 1534 GCAGACATGA-----TGAAAGGCAGCGTCGGCTTCGCCGTCAACCCTGAC 1578
BSNT_04499___ 1579 AGCATATTCGACGTACAGGTGAAACGGCTTCATGCATATAAACGGCAGCT 1628
|||||.|||||.||.||.||.||.||.||.||.||.|||||.||.|||||
BL01415___glg 1579 AGCATCTTCGATGTTCAAGTCAAGCGTCTCCACGCTTATAAGCGCCAGCT 1628
BSNT_04499___ 1629 GCTGAATGTTCTTCACATTATGTATTTGTATAACCGGCTCAAGGAGGACG 1678
..|.|||||.||.||.||.|||||||||||.|||.||||.|||||.|||.
BL01415___glg 1629 TTTAAATGTGCTCCATATCATGTATTTGTACAACAGGCTGAAGGAAGACA 1678
BSNT_04499___ 1679 CCGGGTTTTCAATCTACCCGCAAACCTTTATTTTCGGGGCAAAGGCTTCA 1728
..||.|||.|.||.||.||||||||||||||||||||.||.|||||.||.
BL01415___glg 1679 AAGGCTTTGCCATTTATCCGCAAACCTTTATTTTCGGAGCGAAGGCATCG 1728
BSNT_04499___ 1729 CCAAGCTATTATTATGCCAAGAAAATCATTAAGCTGATCCATTCTGTCGC 1778
||.|..|||.||||||||||.||..||||.||||||||||||||.|||||
BL01415___glg 1729 CCGACTTATCATTATGCCAAAAAGGTCATCAAGCTGATCCATTCAGTCGC 1778
BSNT_04499___ 1779 AGAAAAAGTCAATTATGATCCGGCAGTCAAACAGCTGATCAAAGTTGTTT 1828
|||.|||.|||||.|||||||||..||||.|||...||||||.||..|.|
BL01415___glg 1779 AGATAAAATCAATCATGATCCGGATGTCAGACATTCGATCAATGTGATCT 1828
BSNT_04499___ 1829 TTTTAGAAAATTATAGAGTTTCTATGGCTGAGCGAATTTTTACGGCATCA 1878
||.|.||||||||..|.||.||.|..||.|||||.||||||.||||.|||
BL01415___glg 1829 TTCTGGAAAATTACCGGGTATCAACCGCCGAGCGTATTTTTCCGGCGTCA 1878
BSNT_04499___ 1879 GACGTAAGTGAGCAAATTTCAACCGCAAGCAAGGAAGCGTCTGGTACAGG 1928
||.||.||.||||||||.||..|.||.|||||.|||||.||.||.|||||
BL01415___glg 1879 GATGTCAGCGAGCAAATATCTGCGGCCAGCAAAGAAGCCTCCGGAACAGG 1928
BSNT_04499___ 1929 GAATATGAAGTTTATGATGAACGGGGCTTTGACGATCGGCACGCATGACG 1978
|||.||||||||.|||||.||.||||||||||||||||||||||||||||
BL01415___glg 1929 GAACATGAAGTTCATGATTAATGGGGCTTTGACGATCGGCACGCATGACG 1978
BSNT_04499___ 1979 GCGCAAATATCGAGATCCTTGAGCGGGTGGGCCCTGATTGTATTTACACG 2028
||||.|||||.||.||.||||||.|||||||..|.||.|||||.||||||
BL01415___glg 1979 GCGCCAATATTGAAATGCTTGAGAGGGTGGGGACAGAGTGTATCTACACG 2028
BSNT_04499___ 2029 TTCGGCTTAAAGGCGGATGAAGTTCTATCGTATCAGGAAAACGGCGGCTA 2078
|||||.|||||||||||||||||.||....||...||||||.||||||||
BL01415___glg 2029 TTCGGTTTAAAGGCGGATGAAGTGCTGGACTACGCGGAAAAAGGCGGCTA 2078
BSNT_04499___ 2079 TAGATCGAGGGAATATTATCAGCATGACAGAAGAATCAGGCAGGTAGCGG 2128
|...||.||||||||.|||||||||||...|||.|||||.||....||.|
BL01415___glg 2079 TCTGTCAAGGGAATACTATCAGCATGATGCAAGGATCAGACAAACGGCCG 2128
BSNT_04499___ 2129 ATCAGTTGATCAATGGTTTTTTTGAAGGAGAGGCAGATGAATTTGAATCG 2178
|||||.||||||||||||||||.||||||||.||.|..||||||||..||
BL01415___glg 2129 ATCAGCTGATCAATGGTTTTTTCGAAGGAGAAGCCGGCGAATTTGAGCCG 2178
BSNT_04499___ 2179 ATCTTTGACTCGCTGCTTCCGC--ATAATGATGAGTATTTTGTGCTGAAG 2226
||.|.||||||||||.| ||| ||||||||||.||.|||||..|.||.
BL01415___glg 2179 ATTTATGACTCGCTGAT--CGCTTATAATGATGAATACTTTGTTTTAAAA 2226
BSNT_04499___ 2227 GATTT--CAGCTCATA-TGCAGATGCGCAGGAGCGAATTCA--------A 2265
||||| |..||.||| ||.| |||||||||||.||||| |
BL01415___glg 2227 GATTTTGCTTCTTATATTGTA---GCGCAGGAGCGGATTCAAAAAGACTA 2273
BSNT_04499___ 2266 GCTGATTATCGGGAGCGAAGGAAA----TGGTCTG----AGCGTTCGATT 2307
..|||.|| |||| |||.||| |||..||
BL01415___glg 2274 CTTGAATA-----AGCG-------TCTTTGGGCTGAAAAAGCCGTC---- 2307
BSNT_04499___ 2308 GTAAACATTGCTCATTCTGGATATTTCTCCAGCGACCGCACGATCCGGGA 2357
..||||||.||.|||.|.||||||||.||.|||||||||||.||||||||
BL01415___glg 2308 ACAAACATCGCGCATGCCGGATATTTTTCAAGCGACCGCACCATCCGGGA 2357
BSNT_04499___ 2358 ATATGCGAAGGACATTTGGGGCATCAAGCCG----ATGATGTGA 2397
.||||||.|.||||||||||..||.|||||| |..|| |||
BL01415___glg 2358 GTATGCGGACGACATTTGGGAAATTAAGCCGTACCAGCAT-TGA 2400
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