Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03782 and BL01411
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence dna-align/BSNT_03782___yqfA.1.5803.seq
# -bsequence dna-align/BL01411___yqfA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03782___yqfA-BL01411___yqfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03782___yqfA-BL01411___yqfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03782___yqfA
# 2: BL01411___yqfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1004
# Identity: 805/1004 (80.2%)
# Similarity: 805/1004 (80.2%)
# Gaps: 19/1004 ( 1.9%)
# Score: 3240.5
#
#
#=======================================
BSNT_03782___ 1 ATGGATCCGTCAACACTTATGATTCTGGCA---ATTGTCGCAGTAGCGAT 47
|||||||||||||||| ||.||||...| |||.||||||..|..||
BL01411___yqf 1 ATGGATCCGTCAACAC---TGTTTCTTTTACTTATTATCGCAGCCGGAAT 47
BSNT_03782___ 48 CATTGTTTTGGCAGTATTTTTTACATTTGTGCCTGTAATGCTTTGGATTT 97
|||..|..|.||.||.||.||||||||.||.||.||.|||||.|||||.|
BL01411___yqf 48 CATCCTACTAGCTGTCTTCTTTACATTCGTCCCGGTCATGCTGTGGATCT 97
BSNT_03782___ 98 CAGCTTTGGCAGCCGGAGTGAAAATCAGCATTTTCACTCTAGTTGGGATG 147
|.||||||||.||.||.||.|||||||||||||||||.||..|.||.|||
BL01411___yqf 98 CGGCTTTGGCCGCTGGTGTTAAAATCAGCATTTTCACACTGATCGGAATG 147
BSNT_03782___ 148 AGGCTTCGCCGTGTCATTCCGAATCGGGTTGTTAACCCGCTGATTAAAGC 197
|||||.|||||.||||||||.||.||.||.||.||||||||.||.|||||
BL01411___yqf 148 AGGCTCCGCCGCGTCATTCCAAACCGCGTGGTGAACCCGCTCATCAAAGC 197
BSNT_03782___ 198 CCATAAAGCGGGACTTAATGTTGGAACAAACCAGCTTGAAAGCCACTACC 247
.||.||||||||||||.||||||..|..||.|||||.|||||||||||.|
BL01411___yqf 198 GCACAAAGCGGGACTTGATGTTGCCATCAATCAGCTGGAAAGCCACTATC 247
BSNT_03782___ 248 TGGCTGGAGGTAATGTTGACAGAGTCGTCAACGCGCTTATCGCCGCTCAG 297
|.||.||.||||||||||||.|.||||||||||||||||||||.||.||.
BL01411___yqf 248 TTGCAGGGGGTAATGTTGACCGGGTCGTCAACGCGCTTATCGCTGCCCAA 297
BSNT_03782___ 298 CGAGCTAACATTGAACTCACATTCGAGCGCTGTGCTGCCATTGATCTTGC 347
||.||.|||||||||||.|||||||...|.|||||.|||||.|||.|.||
BL01411___yqf 298 CGTGCAAACATTGAACTTACATTCGCCAGATGTGCGGCCATCGATTTAGC 347
BSNT_03782___ 348 AGGCCGGGACGTGTTGGAAGCTGTTCAAATGAGCGTTAATCCTAAGGTGA 397
.|||||.||||||.|.|||||.||||||||||||||||||||.||.||.|
BL01411___yqf 348 GGGCCGTGACGTGCTTGAAGCCGTTCAAATGAGCGTTAATCCGAAAGTCA 397
BSNT_03782___ 398 TTGAAACACCGTTCATTGCCGGTGTTGCAATGGACGGGATTGAAGTGAAA 447
|.|||||.|||||.|||||||||||.||||||||.||.||.|||||||||
BL01411___yqf 398 TCGAAACGCCGTTTATTGCCGGTGTAGCAATGGATGGTATCGAAGTGAAA 447
BSNT_03782___ 448 GCGAAAGCGAGAATCACAGTAAGAGCGAATATCGAGCGCCTCGTCGGGGG 497
||.||||||||||||||.||..|.||.||.|||||.|||||.||||||||
BL01411___yqf 448 GCAAAAGCGAGAATCACGGTTCGCGCTAACATCGACCGCCTTGTCGGGGG 497
BSNT_03782___ 498 AGCAGGGGAAGAAACCATTGTAGCTCGTGTAGGTGAGGGGATCGTTTCTA 547
|||.||.||||||||.||..|.||.|||||.||.||.|||||||||||.|
BL01411___yqf 498 AGCGGGCGAAGAAACGATCATTGCCCGTGTCGGCGAAGGGATCGTTTCGA 547
BSNT_03782___ 548 CAATCGGTTCATCTGATAATCATAAAAAAGTGCTTGAAAACCCTGACATG 597
||||||||||.||.|||||||||||||||||||||||||||||.||.|||
BL01411___yqf 548 CAATCGGTTCTTCCGATAATCATAAAAAAGTGCTTGAAAACCCAGATATG 597
BSNT_03782___ 598 ATTTCTCAGACAGTCCTTG-GAAAAGGATTGGACTCAGGAACTGCGTTTG 646
|||||.||.||.|| .||| |.|||||.|||||.|||||.||.|||||||
BL01411___yqf 598 ATTTCACAAACCGT-ATTGAGCAAAGGGTTGGATTCAGGTACAGCGTTTG 646
BSNT_03782___ 647 AAATTCTCTCAATTGATATTGCAGATGTAGATATCGGCAAAAACATCGGT 696
|||||||.||.||.|||||.||.||.||.||.|||||||||||||||||.
BL01411___yqf 647 AAATTCTATCGATCGATATCGCTGACGTTGACATCGGCAAAAACATCGGA 696
BSNT_03782___ 697 GCAATTTTACAAACCGATCAGGCTGAGGCTGATAAAAACATCGCGCAGGC 746
||.|||.|.||||||||.||||||||.||.||||||||||||||.|||||
BL01411___yqf 697 GCGATTCTGCAAACCGACCAGGCTGAAGCCGATAAAAACATCGCCCAGGC 746
BSNT_03782___ 747 AAAAGCGGAAGAACGACGTGCGATGGCTGTCGCTCAAGAACAGGAAATGC 796
.|||||||||||.||.||.||.|||||.||.||.||||||||||||||||
BL01411___yqf 747 GAAAGCGGAAGAGCGCCGCGCCATGGCGGTTGCGCAAGAACAGGAAATGC 796
BSNT_03782___ 797 GTGCCCGCGTAGAAGAAATGCGCGCGAAAGTAGTAGAAGCCGAGGCGGAA 846
|.||||||||.||||||||||||||.|||||.||.||||||||.||.|||
BL01411___yqf 797 GCGCCCGCGTCGAAGAAATGCGCGCCAAAGTCGTCGAAGCCGAAGCCGAA 846
BSNT_03782___ 847 GTGCCGCTTGCGATGGCAGAAGCTTTGCGCGAAGGGAATATTGGCGTCAT 896
|||||||||||.|||.|.||||||.|.|||...||.||.||.||||||||
BL01411___yqf 847 GTGCCGCTTGCAATGTCTGAAGCTCTCCGCAGCGGAAAAATCGGCGTCAT 896
BSNT_03782___ 897 GGATTACATGAATATCAAGAATATCGATGCTGACACAGAAATGCGTGATT 946
|||.|||.|.|||||.||.||.|||||.||.|||||.||.|||||.||||
BL01411___yqf 897 GGACTACCTCAATATGAAAAACATCGACGCCGACACTGACATGCGCGATT 946
BSNT_03782___ 947 CATTCGGCAAGCTGACGAAAGACCCTTCGGATGAAGACCGCAAATCATAA 996
|.|||||.|||.|||||||||||| ...||||||| ..|||||||
BL01411___yqf 947 CTTTCGGAAAGATGACGAAAGACC---AAAATGAAGA----GGATCATAA 989
BSNT_03782___ 996 ---- 996
BL01411___yqf 990 ATAA 993
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