Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06032 and BL01393
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence dna-align/BSNT_06032___yxiC.1.5803.seq
# -bsequence dna-align/BL01393.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06032___yxiC-BL01393.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06032___yxiC-BL01393.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06032___yxiC
# 2: BL01393
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity: 174/307 (56.7%)
# Similarity: 174/307 (56.7%)
# Gaps: 65/307 (21.2%)
# Score: 397.5
#
#
#=======================================
BSNT_06032___ 1 ATGGCACAGGAAATTAAAATGGTGTAT---GGCACAGTGAAGCAAGGGCT 47
||||..||.|||||.||| |||.|| ||...|||.||.||||.|||
BL01393 1 ATGGATCAAGAAATAAAA---GTGAATACCGGAGAAGTCAAACAAGCGCT 47
BSNT_06032___ 48 TTCTCAGCTCAAGAATT-CAGC-------TGAACTCAAG-------TCCT 82
.|||.|..|.|||.||| |||| ||| ||| |||
BL01393 48 CTCTAAATTAAAGCATTCCAGCCATTCAATGA----AAGCGACGATTCC- 92
BSNT_06032___ 83 CCTTACCCGGCCATCTCTCA---GGCAGAA--ACCATTTGAATGTTGTG- 126
|.||..|.||| |.||||| ||| |||| ||.|
BL01393 93 ---------GACAGATATCAAGGGCCAGAATCACC--TTGA----TGCGA 127
BSNT_06032___ 127 --AAGTCCATCGAGCAATTAAATGAGGAC-ATCAAAGAGCTCACTGAAGC 173
|||...||.|||.||.|.|||.| ||| ||.||..||.||.||....|
BL01393 128 CAAAGAAGATAGAGGAACTGAATCA-GACGATTAATAAGATCGCTTCTTC 176
BSNT_06032___ 174 ATATGCGTC--CGTTCTTGCCAAGCATATTGCACAAACGGAAAGCGCGGT 221
.|||||.|| |.|||| |.||.||..|.|..|||||||||...||.||
BL01393 177 CTATGCCTCTGCTTTCT--CAAAACAAGTCGTCCAAACGGAATCAGCAGT 224
BSNT_06032___ 222 AAACGCTATGAAGGAAACGGACGAAAACA--TATCATCTTCCATGAAATA 269
..|.||.||||.|||.||.||| ||||| |..|.||.||.||||||..
BL01393 225 CGAAGCAATGATGGACACCGAC--AAACAGCTGGCTTCATCGATGAAAAC 272
BSNT_06032___ 270 A------ 270
|
BL01393 273 AAAATAG 279
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