Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03550 and BL01383
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_03550___yqjI.1.5803.seq
# -bsequence dna-align/BL01383___yqjI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03550___yqjI-BL01383___yqjI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03550___yqjI-BL01383___yqjI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03550___yqjI
# 2: BL01383___yqjI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1413
# Identity: 1161/1413 (82.2%)
# Similarity: 1161/1413 (82.2%)
# Gaps: 6/1413 ( 0.4%)
# Score: 4761.0
#
#
#=======================================
BSNT_03550___ 1 ATGTCAAAACAACAAATCGGCGTTATCGGACTTGCGGTCATGGGTAAAAA 50
|||.|||||||||||||.||.||..|.||..|.||.||.|||||.|||||
BL01383___yqj 1 ATGGCAAAACAACAAATAGGTGTAGTTGGTTTAGCAGTAATGGGAAAAAA 50
BSNT_03550___ 51 TCTGGCTTTAAATATCGAAAGCCGGGGATTTTCTGTTTCTGTCTACAACA 100
..||||||||||.||.||||||||.||.|||||.||||||||||||||||
BL01383___yqj 51 CTTGGCTTTAAACATTGAAAGCCGCGGGTTTTCAGTTTCTGTCTACAACA 100
BSNT_03550___ 101 GATCAAGC-AGTAAAACTGAGAAGTTTTTACAGGAGGCAAAAGGAAAAAA 149
|||||||| || |||||.||..|||||.|..|.||.||..||||.|||||
BL01383___yqj 101 GATCAAGCGAG-AAAACCGAAGAGTTTCTGAAAGAAGCCGAAGGCAAAAA 149
BSNT_03550___ 150 TGTTGTTGGCACATACAGCATTGAAGAATTTGTCCAATC-CTTGGAAACA 198
.|||||.||.|||||||||||||||||.|||||..|||| ||| ||||.|
BL01383___yqj 150 CGTTGTCGGTACATACAGCATTGAAGAGTTTGTTGAATCTCTT-GAAAAA 198
BSNT_03550___ 199 CCGCGCAAAA-TCTTATTAATGGTTAAAGCGGGAACTGCAACAGATGCGA 247
|||||||||| |||| ||||||||.|||||.|||||..|.|||||.||.|
BL01383___yqj 199 CCGCGCAAAATTCTT-TTAATGGTCAAAGCTGGAACACCGACAGACGCAA 247
BSNT_03550___ 248 CAATTCAATCTCTTCTTCCTCATCTAGAGAAGGATGATATTTTAATTGAC 297
|.||||||||.|||||.||||||||.||.||.|..||.|||||.||||||
BL01383___yqj 248 CGATTCAATCGCTTCTGCCTCATCTTGAAAAAGGCGACATTTTGATTGAC 297
BSNT_03550___ 298 GGCGGTAATACATACTATAAAGATACACAGCGCCGTAACAAAGAACTCGC 347
|||||.||||||||.|||||||||||.|||.|..|.||||..||.||.||
BL01383___yqj 298 GGCGGAAATACATATTATAAAGATACGCAGAGAAGAAACAGGGAGCTGGC 347
BSNT_03550___ 348 TGAAAGCGGCATTCATTTTATCGGAACAGGTGTTTCCGGCGGAGAAGAAG 397
.||||||||||||||.||.|||||.||.||.|||||||||||.|||||||
BL01383___yqj 348 CGAAAGCGGCATTCACTTCATCGGCACCGGCGTTTCCGGCGGTGAAGAAG 397
BSNT_03550___ 398 GGGCACTTAAAGGGCCTTCTATTATGCCTGGCGGACAAAAAGAAGCACAT 447
|.||.||.||||||||.|||||.|||||.|||||||||||.|||||.|||
BL01383___yqj 398 GCGCTCTGAAAGGGCCGTCTATCATGCCAGGCGGACAAAAGGAAGCCCAT 447
BSNT_03550___ 448 GAGCTTGTAAAACCGATTCTTGAAGCCATTTCTGCAAAAGTTGACGGAGA 497
||||||||.||.||||||||||||||.||||||||.||.||.|||||.||
BL01383___yqj 448 GAGCTTGTCAAGCCGATTCTTGAAGCTATTTCTGCCAAGGTGGACGGCGA 497
BSNT_03550___ 498 ACCTTGTACGACATATATCGGTCCGGACGGCGCCGGCCATTACGTAAAAA 547
|||.|||||||||||.||||||||.|||||||||||||||||.|||||||
BL01383___yqj 498 ACCGTGTACGACATACATCGGTCCTGACGGCGCCGGCCATTATGTAAAAA 547
BSNT_03550___ 548 TGGTGCACAACGGAATTGAATACGGAGATATGCAGCTGATCTCTGAATCA 597
||||.||.|||||.||.||||||||.|||||||||||||||||.|||||.
BL01383___yqj 548 TGGTTCATAACGGCATCGAATACGGCGATATGCAGCTGATCTCAGAATCC 597
BSNT_03550___ 598 TATTTCATTCTGAAACAGGTGCTGGGCCTTTCTGCTGATGAGCTTCATGA 647
||.||.|||.|||||||..|..|.||.||.||..|.|||||||||||.||
BL01383___yqj 598 TACTTTATTTTGAAACACATTGTCGGTCTGTCATCAGATGAGCTTCACGA 647
BSNT_03550___ 648 AGTTTTCGCTGAATGGAATAAAGGTGAGCTTGATAGCTACCTGATTGAGA 697
|||.||..|.||.||||||||.||.||||||||.|||||.|||||.||.|
BL01383___yqj 648 AGTCTTTTCCGAGTGGAATAAGGGAGAGCTTGACAGCTATCTGATCGAAA 697
BSNT_03550___ 698 TTACGGCTGACATCTTCACAAAAAAAGACGAAGAGACAGGCAAGCCGCTT 747
|.||||||||.||.|||||.|||||||||||.||.||.||||||||||||
BL01383___yqj 698 TCACGGCTGATATTTTCACGAAAAAAGACGAGGAAACCGGCAAGCCGCTT 747
BSNT_03550___ 748 GTTGATGTGATTCTTGATAAAGCAGGGCAAAAAGGAACAGGAAAATGGAC 797
|||||.||.||.||.|||||||||||.||||||||.||||||||||||||
BL01383___yqj 748 GTTGACGTCATCCTCGATAAAGCAGGTCAAAAAGGCACAGGAAAATGGAC 797
BSNT_03550___ 798 AAGCCAAAGCGCACTTGACTTAGGCGTTCCGCTTCCGATTATTACTGAAT 847
||||||||||||.||||||.|.||||||||||||||.||.|||||.||||
BL01383___yqj 798 AAGCCAAAGCGCTCTTGACCTGGGCGTTCCGCTTCCAATCATTACGGAAT 847
BSNT_03550___ 848 CTGTATTCGCACGCTTTATCTCAGCTATGAAGGAAGAGCGTGTGAAAGCG 897
||||.|||||.|||||.|||||..|.|||||.||.|||||.||.||||||
BL01383___yqj 848 CTGTTTTCGCCCGCTTCATCTCTTCCATGAAAGAGGAGCGCGTCAAAGCG 897
BSNT_03550___ 898 AGCGGACTTCTTTCAGGACCAGAAGTGAAGCCTGTTACAGAAAATAAAGA 947
|||...|||||..|||||||.||||.|||.||||...|.||.||.|||||
BL01383___yqj 898 AGCAAGCTTCTGGCAGGACCTGAAGCGAAACCTGCCGCTGAGAACAAAGA 947
BSNT_03550___ 948 AGAGCTGATTGAAGCGGTCAGAAAAGCGTTGTTCATGAGTAAAATCTGTT 997
|||||||||.||||||||||||||||||.|.||||||||.||||||||||
BL01383___yqj 948 AGAGCTGATCGAAGCGGTCAGAAAAGCGCTCTTCATGAGCAAAATCTGTT 997
BSNT_03550___ 998 CATACGCGCAAGGATTTGCCCAAATGAAAGCTGCTTCTGAAGAATACAAC 1047
|.|||||.|||||.|||||.|||||||||||.||.||.|||||||||..|
BL01383___yqj 998 CTTACGCCCAAGGCTTTGCTCAAATGAAAGCCGCATCAGAAGAATACGGC 1047
BSNT_03550___ 1048 TGGGATCTGAAATATGGTGAAATCGCTATGATCTTCCGCGGTGGTTGCAT 1097
||||||.|||||||.||.||.|||||.|||||.||||||||.||.|||||
BL01383___yqj 1048 TGGGATTTGAAATACGGCGATATCGCGATGATTTTCCGCGGAGGATGCAT 1097
BSNT_03550___ 1098 CATTCGCGCGGCATTCCTTCAGAAGATCAAAGAAGCTTACGATCGCGAGC 1147
|||.||||||||.|||||.||.||.|||||||||||.||.||.|||||.|
BL01383___yqj 1098 CATCCGCGCGGCGTTCCTGCAAAAAATCAAAGAAGCGTATGACCGCGATC 1147
BSNT_03550___ 1148 CTGAGCTTGACAACCTGCTTCTTGACAGCTATTTCAAGAATATTGTAGAA 1197
|.||||||||||||||||||||||||...||.|||||.|||||.||.|||
BL01383___yqj 1148 CAGAGCTTGACAACCTGCTTCTTGACCCGTACTTCAAAAATATCGTTGAA 1197
BSNT_03550___ 1198 AGCTATCAAGGAGCGCTTCGCCAAGTGATTTCACTTGCAGTTGCCCAAGG 1247
||||||||.|||||.||.|||.||..||||||.|||||.||||..|||||
BL01383___yqj 1198 AGCTATCAGGGAGCCCTCCGCAAAACGATTTCTCTTGCGGTTGAACAAGG 1247
BSNT_03550___ 1248 TGTGCCGGTGCCATCATTCTCAAGCGCATTAGCCTACTATGACAGCTACC 1297
..|.||.||.||.|..|||||||||||..|.||.||||.|||||||||||
BL01383___yqj 1248 AATTCCTGTACCTTGCTTCTCAAGCGCTCTCGCTTACTTTGACAGCTACC 1297
BSNT_03550___ 1298 GCACAGCCGTACTGCCTGCAAACTTAATCCAAGCACAGCGCGACTACTTT 1347
||||.||....|||||.||.|||.|.||.||.||.|||||||||||||||
BL01383___yqj 1298 GCACTGCAACCCTGCCGGCCAACCTGATTCAGGCGCAGCGCGACTACTTT 1347
BSNT_03550___ 1348 GGCGCTCATACGTATGAGCGTACTGACAAAGAAGGCATCTTCCATACTGA 1397
|||||.|||||||||||||||||.||.|||||||||||.|||||.|||||
BL01383___yqj 1348 GGCGCCCATACGTATGAGCGTACAGATAAAGAAGGCATTTTCCACACTGA 1397
BSNT_03550___ 1398 ATGGATGAAGTAA 1410
.||||||||.|||
BL01383___yqj 1398 GTGGATGAAATAA 1410
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