Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01620 and BL01381
See
Amino acid alignment /
Visit
BSNT_01620 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_01620___phoA.1.5803.seq
# -bsequence dna-align/BL01381___phoB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01620___phoA-BL01381___phoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01620___phoA-BL01381___phoB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01620___phoA
# 2: BL01381___phoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1908
# Identity: 843/1908 (44.2%)
# Similarity: 843/1908 (44.2%)
# Gaps: 777/1908 (40.7%)
# Score: 1782.0
#
#
#=======================================
BSNT_01620___ 1 ATGAGTTTGTTTCAAAATATGAAATCAAAACTTCTGCCAATCGCCGCTGT 50
|||.||||.||.|..||.| .|||||.|
BL01381___pho 1 ATGGGTTTCTTACGCAACA------------------GAATCGTC----- 27
BSNT_01620___ 51 TTCTGTCCTTACAGCTGG-------AGT--CTTT-------GCCGGAGCT 84
|.|.||||| |||| ||| |||| ||.|||.|.
BL01381___pho 28 ----GGCATTACA-CTGGCAGGCGCAGTCGCTTTAGGATCGGCGGGAACA 72
BSNT_01620___ 85 GAGC--TGCAGCAAACAGAAAAGGCCAGCGCCAAAAAACAAGACAAAGCT 132
| || |||.|||| .|.||| ||||| ||||||.|||| |.|||.
BL01381___pho 73 G-GCAGTGCGGCAA--TGGAAA---CAGCG--AAAAAAAAAGA-AGAGCC 113
BSNT_01620___ 133 G-AGATCAGAAATGTCATTGTGATGATAGGCGACGGCATG---GGGACGC 178
| ||.|||.|||.||.||..||||| |.|||| |||||
BL01381___pho 114 GAAGGTCAAAAACGTGATCATGATG---------GTCATGGATGGGAC-- 152
BSNT_01620___ 179 CTTACATAAGAGCCTACCGTTCCATGAAAAATAACGGTGACACAC-CGAA 227
||| |..||| || .||.|||..||.|||.| .|.|
BL01381___pho 153 -------AAG------CTCTTC--TG--CAACAACTTTGGCACGCTGGTA 185
BSNT_01620___ 228 TAACCCGAAGTTAACAG-----AATTTGACCGGAACCTGACAGGCATGAT 272
||| |.|..|||.| || |.||||.||.|.|.|..|||
BL01381___pho 186 TAA----AGGCGAACCGCTCGCAA-TGGACCAGATCGTCAGCGGC----- 225
BSNT_01620___ 273 GATGACGCATCCGGATGACCCTGACTAT-------AAT-----ATTACAG 310
|.|| ||||||.| ||| ||| ||.||.|
BL01381___pho 226 GGTG-----TCCGGACG--------TATTCGGCAGAATCGGCGATCACTG 262
BSNT_01620___ 311 ATTCAGCAGCAGCCGGAACAGCATTAGCGACAGG-CGTTAAGA------- 352
||||.|||.|.||.|.|||.||..|.||.||.|| || ||.|
BL01381___pho 263 ATTCTGCACCTGCAGCAACTGCGATGGCAACGGGACG--AAAATCAAATT 310
BSNT_01620___ 353 ---CATATAAC---------------------AATGCAATTGGCGTCGAT 378
|.||||.| |||.||...||.|||||.
BL01381___pho 311 CTTCCTATATCGGTGTGCTGCCTTCAAAAGTGAATACACCAGGAGTCGAG 360
BSNT_01620___ 379 AAAAACGGGAAAAAAGTGAAAT----------CTGTA---------CTTG 409
||...|.|..|||||| || ||||| ||.|
BL01381___pho 361 AAGGTCCGTGAAAAAG----ATCATTACCGGCCTGTAGCAAACGTGCTGG 406
BSNT_01620___ 410 AAGAGGCCAAACAGCAAGGCAAGTCAACAGGGCTTGTCGCCACGTCTGAA 459
|||..||.||||||.|.||.||..||||.||..|..|.||.||.||||||
BL01381___pho 407 AAGGCGCAAAACAGAAGGGGAAAGCAACCGGCATCATTGCAACATCTGAA 456
BSNT_01620___ 460 ATTAACCACGCCACTCCAGCCGCATATGGCGCCCACAATGAATCACGGAA 509
|||.|.||.|||||.||.||||..|||..||.|||..||.||...||.||
BL01381___pho 457 ATTCAGCATGCCACGCCTGCCGGCTATTCCGGCCATCATAAAGACCGCAA 506
BSNT_01620___ 510 AAACATGGACCAAATCGC--------CAACAGCTATATGGATGACAAAAT 551
.||..|.| ||..|| ||.|||.|.|||
BL01381___pho 507 TAATTTTG----AAGTGCTCGGTGAACAGCAGGTTTAT------------ 540
BSNT_01620___ 552 AAAAGGCAAACATAAAATAGACGTGCTGCTCGGCGGCGGAAAA-----TC 596
||.||.||.||.||..|.||.|||||.|||||| .|
BL01381___pho 541 ----------CAAAACATGGATGTTGTCCTTGGCGGAGGAAAAGAATCGC 580
BSNT_01620___ 597 TT----------------ATTTTAACCGCAAGGAC-----AGAAACTTGA 625
|| ||...|.||||||.||| || |.||||.
BL01381___pho 581 TTCAGCCGGGTACAAAGGATAAAAGCCGCAAAGACGGTGAAG-ACCTTGT 629
BSNT_01620___ 626 CAAAG--------------------GAATTC----AAAC--AAGCCGGCT 649
.|||| ||.||| |||| |||
BL01381___pho 630 AAAAGTGCTCAAAGATAAAAAGTACGATTTCGTTGAAACGAAAG------ 673
BSNT_01620___ 650 ACAGCTATGTGACAACTAAACAAG----CATTGAAGAAAAATAAAGATCA 695
|| |||||...|||| .||.||| ||||||
BL01381___pho 674 ------AT----CAACTCCTCAAGTCAAAATCGAA-AAAAAT-------- 704
BSNT_01620___ 696 GCAGGTGCTCGGGCTTTTCGCAGAGGGAGGGCTTGCTAAGGCGCTCGACC 745
|.||.|| |.|||.||.|||.|.|| .|||| |
BL01381___pho 705 -CTGGGGC---GCCTTCTCACAGCGCGA--------------TCTCG--C 734
BSNT_01620___ 746 G--TGACA-----------GCAAAACA----------CCGTCTCTCAAAG 772
| ||||| ||||..|| |||.||.|...||
BL01381___pho 735 GTATGACATGGACCGCCGCGCAACGCATCCAGAGCAGCCGACTATTGCAG 784
BSNT_01620___ 773 ACATGACG--------GTTTCAGCAATTGATCGCCTGAACCAAAATAAAA 814
|.|||||| |.||||| .|||.| .|.|||.|.||
BL01381___pho 785 AGATGACGAAAAAATCGATTCAG-------ACGCTT---TCTAAAGACAA 824
BSNT_01620___ 815 --AAGGATTTTTCTTGATGGTCGAAGGGAGCCAGATTGACTGGGCGGCCC 862
|.||.||.||.||..|.||.|||||.|||.||..|||||||||.||.|
BL01381___pho 825 GGACGGTTTCTTTTTATTCGTGGAAGGAAGCAAGCCTGACTGGGCAGCGC 874
BSNT_01620___ 863 ATGACAATGATACAGTAGGAGCCATG---AGCGAGGTTAAAGAT-----T 904
||.|.||.|||.|..|.|| |||| |||||.|| || |
BL01381___pho 875 ATCAAAACGATCCGATCGG---CATGATCAGCGATGT-----ATTGGCGT 916
BSNT_01620___ 905 TTGAACAGGCCTATAAAGCCGCGATTGAATTTGCGAAAAAAGACAAACAT 954
||||..|.||....||||..|||.||||.||.||.||||||||.||||||
BL01381___pho 917 TTGATAACGCGGTGAAAGAAGCGCTTGATTTCGCTAAAAAAGATAAACAT 966
BSNT_01620___ 955 ACACTTGTGATTGCAACTGCT--GACCAT-ACAACCGGCGGCTTTACCAT 1001
|||.|.||.||||| |..|| |||||| .||| |.|||||.|..||||
BL01381___pho 967 ACAATGGTTATTGC--CGTCTCAGACCATGGCAA-CAGCGGCATCTCCAT 1013
BSNT_01620___ 1002 TGGC----GCAA-ACGGGGAAAAAAATTGGC----ACGCAGAACCGAT-- 1040
.||| |||| |||..|||| ||| ||.||..||||.|
BL01381___pho 1014 CGGCAACAGCAACACGACGAAA------GGCTATGACACAACACCGGTAT 1057
BSNT_01620___ 1041 ---------TCTCTCCGCTAAGAAAACACCTGAATTCA------------ 1069
||..|||||| |||||.|.||.||.|.|
BL01381___pho 1058 CAGCCTATGTCGATCCGCT--GAAAAAAGCTAAAATGACGGTGGAAGGCG 1105
BSNT_01620___ 1070 ----TGGCCAA--AAAA---------------ATCAGTGAA--GGC-AAG 1095
||||.|| |||| |||...||| ||| |||
BL01381___pho 1106 CAACTGGCAAATTAAAAGACGACTTATCGAATATCGAAGAAGCGGCGAAG 1155
BSNT_01620___ 1096 C----CGG--TTAAAGATGTGCTCGCCCGCTATGGCAATCTGA-AAGTCA 1138
| ||| ||.|.||| |...|||| |||| || |||..|
BL01381___pho 1156 CTTTACGGACTTGATGAT-TTAACGCC------GGCA----GAGAAGGAA 1194
BSNT_01620___ 1139 CATCTGAAGAAATCAAAAGCGTTGAAGCAGCTGCACAGGCTGACAAAAGC 1188
||.||| ||||||||..|| .||||||..
BL01381___pho 1195 CAGCTG--------AAAAGCGTGAAA---------------AACAAAAAA 1221
BSNT_01620___ 1189 AAAGGGGCCTACAAAGCCATCAT----CAAGATTTTTAATACTCGCTCCA 1234
.|||.|||.| |||.|| ||||.|..|.|..|..||..|||
BL01381___pho 1222 GAAGCGGCTT-------CATTATTTACCAAGCTGCTCAGCAACCGGGCCA 1264
BSNT_01620___ 1235 ACAGCGGATGGACGAGTACCGATCATACCGGCGAAGAAG--TACCGGTAT 1282
|||.|||||..||.|....||.||||||.||.|||||.| |.||.||||
BL01381___pho 1265 ACATCGGATTCACAACAGGCGGTCATACGGGTGAAGACGTCTTCCTGTAT 1314
BSNT_01620___ 1283 ACGCGTACGGCCCCGGAAAAGAAAAATTCCGC--GGATTGATTAACAATA 1330
.||||.||.|| |||||| .|||| ||..|..|..|.||.|
BL01381___pho 1315 --TCGTATGGTCC------AGAAAA--GCCGCAGGGTCTCGTCGAAAACA 1354
BSNT_01620___ 1331 CGGA-----CCA-------GGCAAA---------CATCA----------- 1348
|.|| ||| |||||| |.|||
BL01381___pho 1355 CCGATATCGCCAAAACGATGGCAAAGGCAATGGGCTTCAACTTAGACAAA 1404
BSNT_01620___ 1349 -------------TATTTA------------AG--ATTTTAAAAA-CTGG 1370
|||||| || ||||.||||| |.||
BL01381___pho 1405 TTAACAAACGAATTATTTATCGAAGCAAAACAGGCATTTAAAAAAGCCGG 1454
BSNT_01620___ 1371 ---------------------AAAA--------TAA-------------- 1377
|||| |||
BL01381___pho 1455 AGCCAGCGTAACGATCGATCAAAAAGATCCGGCTAACCCAGTTCTTGTCG 1504
BSNT_01620___ 1377 -------------------------------------------------- 1377
BL01381___pho 1505 CAGCGCGCAAAAAAGCAAAAGCCGAAATGCCTGTGAACAAAAACATTATC 1554
BSNT_01620___ 1377 -------------------------------------------------- 1377
BL01381___pho 1555 AGAATCAACGGGAAGGAATACGAACTAGACAGCGTGATTGTTGAAAGCAA 1604
BSNT_01620___ 1377 -------------------------------------------------- 1377
BL01381___pho 1605 TGGATCCTTCTACGTGCCTAAAGAAGCAGTTCAGCTATTCAAAAAATACG 1654
BSNT_01620___ 1377 -------- 1377
BL01381___pho 1655 CCAGATAA 1662
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.