Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01001 and BL01380

See Amino acid alignment / Visit BSNT_01001 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence dna-align/BSNT_01001.1.5803.seq
#    -bsequence dna-align/BL01380.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01001-BL01380.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01001-BL01380.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01001
# 2: BL01380
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     206/314 (65.6%)
# Similarity:   206/314 (65.6%)
# Gaps:          40/314 (12.7%)
# Score: 737.5
# 
#
#=======================================

BSNT_01001         1 ---------------------------------ATGTCTACCAGTTTATT     17
                                                      |||||.||.|||.|..|
BL01380            1 ATGAAGAAAATTTTACTCGCATGCAGCTCTGGAATGTCGACAAGTCTCCT     50

BSNT_01001        18 GGTGACAAAAATGAAGGAATACGCACAGTCTATCGGTGAGGAAGCAGAGA     67
                     |||.||.||.|||.||||||||||.||.||.||||||||.||.|||.|.|
BL01380           51 GGTTACCAAGATGCAGGAATACGCGCATTCAATCGGTGACGAGGCAAAAA    100

BSNT_01001        68 TTTGGGCTGTTGGCCAGGATAAAGCAAAAGAAGACATGAGAAAAGCGGAT    117
                     |||||||.||.||.|||||..|.||.|||.||||.|||..|.|.|||.|.
BL01380          101 TTTGGGCGGTCGGACAGGACCAGGCGAAAAAAGAGATGGCAGAGGCGAAC    150

BSNT_01001       118 GCCGTTTTGATCGGTCCGCAAATGAGCTTTCTGAAAAGCGAACTCCAAAA    167
                     |.||||.|.|||||.|||||||||||||||.|.|||.||||.||.||.||
BL01380          151 GTCGTTCTCATCGGCCCGCAAATGAGCTTTTTAAAAGGCGAGCTGCAGAA    200

BSNT_01001       168 AGAAGCGGATCAATACAACATTCGGGTTGAAGTCATTGACATGATGGCCT    217
                     .|||||.||.||.|||...|||..||||||.||.|||||.|||.||||.|
BL01380          201 GGAAGCTGAACAGTACGGTATTAAGGTTGATGTGATTGATATGCTGGCTT    250

BSNT_01001       218 ACGGAATGGCAGATGGGAAAAAAGCGTATGAGCAGGCATT--GTCCTTAA    265
                     ||||||||||.|||||.||.|||||.|||||.|||||..|  | |||.|.
BL01380          251 ACGGAATGGCTGATGGAAAGAAAGCTTATGAACAGGCGCTAAG-CCTGAT    299

BSNT_01001       266 TGGTGAATCAATAA    279
                     .||.||.|.|    
BL01380          300 CGGGGATTGA----    309


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