Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06217 and BL01375
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence dna-align/BSNT_06217___yyzB.1.5803.seq
# -bsequence dna-align/BL01375___yyzB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06217___yyzB-BL01375___yyzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06217___yyzB-BL01375___yyzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06217___yyzB
# 2: BL01375___yyzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity: 139/247 (56.3%)
# Similarity: 139/247 (56.3%)
# Gaps: 71/247 (28.7%)
# Score: 340.5
#
#
#=======================================
BSNT_06217___ 1 ATGCACGCACCGTTATC----CTTATTAAAACAAATGCTGAAGGAACACC 46
.||.|..|..||.|||| ||.| ||||.|||| ||.|.|||||.|
BL01375___yyz 1 TTGAAATCGACGATATCGGAGCTGA--AAAAGAAAT--TGTATGAACAGC 46
BSNT_06217___ 47 AAAT-AGACACTGAAAAA--GCTGT-CACTTTCGAAGAATATATA----- 87
|.|| ||| |.|||| |||.| |||.||.|||||.||.|.|
BL01375___yyz 47 AGATCAGA----GCAAAAGGGCTTTACACATTTGAAGAGTACAAAGATAT 92
BSNT_06217___ 88 --GCAATGAG--GCTAAAGCTTCAGGAGCTGATGGGGAAATTTGCTTCGA 133
||||||.| ||.||.||| ||.||| |||||||||
BL01375___yyz 93 GCGCAATGTGCTGCAAACGCT------GCGGAT---GAAATTTGC----- 128
BSNT_06217___ 134 TCGGG--------GAGTGGGATCTGTATCAAAAAGCGGCAGATTTGATG- 174
|| ||.||||||.||||.|||.|.|||.|.|||||||||
BL01375___yyz 129 ---GGCCTATGAAGAATGGGATTTGTACCAACATGCGACCGATTTGATGG 175
BSNT_06217___ 175 -----ATGC---------ACA-TAGG--CATCCAATGGATGAAATAA 204
||.| ||| |.|| ||.|| ||.||.|.|||
BL01375___yyz 176 TCAGCATTCCCTTGAAAAACAGTTGGAACAGCC---GGGTGGATTAA 219
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