Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03266 and BL01369
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence dna-align/BSNT_03266___bsaA.1.5803.seq
# -bsequence dna-align/BL01369___bsaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03266___bsaA-BL01369___bsaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03266___bsaA-BL01369___bsaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03266___bsaA
# 2: BL01369___bsaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 515
# Identity: 343/515 (66.6%)
# Similarity: 343/515 (66.6%)
# Gaps: 67/515 (13.0%)
# Score: 1118.0
#
#
#=======================================
BSNT_03266___ 1 ATGTCTATTTATCATATGAAGGTACGT----ACAATCACAGGGAAAGACA 46
|||||.|||||..||||.| .||| ||.||.|.|||..|.||||
BL01369___bsa 1 ATGTCCATTTACGATATCA----GCGTCAAGACGATTAAAGGCGAGGACA 46
BSNT_03266___ 47 TGACACTTCAGCC-TTTCGCGGGAAAGGTACTGATGATCGTGAATACAGC 95
.||||||.|.||| |.|...||.||| ||.|||.|.|||||.||.||.||
BL01369___bsa 47 CGACACTGCGGCCGTATAAAGGCAAA-GTGCTGCTCATCGTCAACACCGC 95
BSNT_03266___ 96 AAGTAAGTGCGGTTTTACTCCCCAATTAAAGCAGCTGCAGGAATTATATG 145
....||||||||.|||||.||.||||...|||||||.||.||.||.||||
BL01369___bsa 96 CTCGAAGTGCGGATTTACACCTCAATATCAGCAGCTTCAAGACTTGTATG 145
BSNT_03266___ 146 ATACATATCAGCAGGAGGGGCTGGAGATCTTAGGGTTTCCCTGCAATCAA 195
|.||||||.|..|...||||||.|||||..|.||.||||||.||||.|||
BL01369___bsa 146 AAACATATAAAGACCGGGGGCTTGAGATTCTCGGCTTTCCCAGCAACCAA 195
BSNT_03266___ 196 TTCATGAACCAAGAGCC---TGATGAAGAGGCTGA--CATACAGGAATTT 240
||||||||.||.||||| .||||||.| | |||..|.||||||
BL01369___bsa 196 TTCATGAATCAGGAGCCGGGCGATGAAAA-----AAGCATTGAAGAATTT 240
BSNT_03266___ 241 TGTGAAACA-----AATTACGGTGTTACATTTCCTATGTTTTCAAAAGTG 285
|| || |||||||||||.||.|||||.||||||||.||.|||
BL01369___bsa 241 TG-----CAGCGTCAATTACGGTGTCACGTTTCCGATGTTTTCGAAGGTG 285
BSNT_03266___ 286 GATGTAAACGGGAA--AAATGCCCACCCGCTGTTTGTGTATTTGACAGAA 333
.|||||||.|||.| |||| ||||||||||||.....|.||||| |||
BL01369___bsa 286 AATGTAAAAGGGGATCAAAT--CCACCCGCTGTTCCGCCACTTGAC-GAA 332
BSNT_03266___ 334 C-ATGCGAAAGGGATGCTGGGAACTAAGGCGATCAAGTGGAATTTCACGA 382
| |.|||||.||.|||||.|||||.||.|||.||||.|||||||||||.|
BL01369___bsa 333 CAAGGCGAAGGGCATGCTTGGAACAAAAGCGGTCAAATGGAATTTCACAA 382
BSNT_03266___ 383 AATTTATAGTGGATAGAAATGGAGAAATCGTTGGCCGTTATTCACCAAAT 432
|||||.|.||.|||..||..|||||||.|||||..||.|.||||||..|.
BL01369___bsa 383 AATTTCTCGTCGATCAAACCGGAGAAAACGTTGTGCGCTTTTCACCGCAA 432
BSNT_03266___ 433 ACAAATCCGAAAGAGCTGGA--AAAC------GATATCG------TGAAG 468
||.|||||.||.|||.|||| |.|| ||.||.| |||
BL01369___bsa 433 ACCAATCCAAAGGAGATGGAGGAGACCATTCAGAAATGGCTGGGCTGA-- 480
BSNT_03266___ 469 CTATTAGAGCAATAA 483
BL01369___bsa 480 --------------- 480
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