Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03269 and BL01366
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence dna-align/BSNT_03269___ugtP.1.5803.seq
# -bsequence dna-align/BL01366___ugtP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03269___ugtP-BL01366___ugtP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03269___ugtP-BL01366___ugtP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03269___ugtP
# 2: BL01366___ugtP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1182
# Identity: 873/1182 (73.9%)
# Similarity: 873/1182 (73.9%)
# Gaps: 63/1182 ( 5.3%)
# Score: 3159.5
#
#
#=======================================
BSNT_03269___ 1 TTGAATACCAATAAAAGAGTATTAATTTTGACTGCAAATTACGGAAATGG 50
||||||||||||||||...|||||||||||||||||||||||||||||||
BL01366___ugt 1 TTGAATACCAATAAAAATATATTAATTTTGACTGCAAATTACGGAAATGG 50
BSNT_03269___ 51 ACATGTGCAGGTAGCCAAAACACTTTATGAACAATGTGTACGGCTCGGCT 100
.|||||.||.|||||||||||.||.||..||.|.||.|.|.|||||||.|
BL01366___ugt 51 CCATGTTCAAGTAGCCAAAACGCTCTACCAAGAGTGCGAAAGGCTCGGTT 100
BSNT_03269___ 101 TTCAGCATGTAACAGTTTCTAATTTGTACCAAGAGTCAAATCCGATTGTT 150
||.||.|||||||.|||||.||||||||.|||||.||||||||||||||.
BL01366___ugt 101 TTAAGAATGTAACTGTTTCGAATTTGTATCAAGAATCAAATCCGATTGTG 150
BSNT_03269___ 151 TCAGAGGTAACTCAATACCTTTATTTAAAAAGCTTCTCAATCGGGAAACA 200
||||||.|.||.||.||.||.||.||.|||||||||||||||||.|||||
BL01366___ugt 151 TCAGAGATTACGCAGTATCTCTACTTGAAAAGCTTCTCAATCGGCAAACA 200
BSNT_03269___ 201 GTTTTATCGTTTGTTTTATTACGGAGTTGACAAAATCTATAATAAACGTA 250
|||||||||..|.||.||.||.|||||.||.|||||.||.||||||.|.|
BL01366___ugt 201 GTTTTATCGCCTTTTCTACTATGGAGTCGATAAAATTTACAATAAAAGGA 250
BSNT_03269___ 251 AATTCAATATTTACTTTAAAATGGGTAATAAAAGATTGGGCGAACTTGTC 300
|.||.||||||||.||.||||||||.||||||.|..|||.|.||||.||.
BL01366___ugt 251 AGTTTAATATTTATTTCAAAATGGGAAATAAACGGCTGGACCAACTGGTT 300
BSNT_03269___ 301 GATGAACATCAGCCCGATATTATTATTAATACATTTCCGATGATCGTCGT 350
.|..||||||||||.||.|||||.||.|||||.|||||.|||||.|||||
BL01366___ugt 301 AAAAAACATCAGCCAGACATTATCATCAATACGTTTCCAATGATTGTCGT 350
BSNT_03269___ 351 GCCGGAATACAGACGCCGAACTGGAAGAGTCATTCCTACCTTCAACGTTA 400
|||.|||||||||||..|||..||||.|||||||||.||.||.|||||.|
BL01366___ugt 351 GCCCGAATACAGACGGAGAATGGGAAAAGTCATTCCGACTTTTAACGTCA 400
BSNT_03269___ 401 TGACTGATTTTTGTCTTCATAAAATTTGGGTTCACGAAAACGTGGATAAA 450
||||.|||||.||||||||||||||||||||.||||||.|..|.||||||
BL01366___ugt 401 TGACGGATTTCTGTCTTCATAAAATTTGGGTCCACGAACATATTGATAAA 450
BSNT_03269___ 451 TATTATGTGGCGACAGATTACGTGAAGGAAAAACTGCTGGAGATCGGCAC 500
|||||.||.||.||.|||||||||||||||||.|||||.|||||||||||
BL01366___ugt 451 TATTACGTAGCAACTGATTACGTGAAGGAAAAGCTGCTCGAGATCGGCAC 500
BSNT_03269___ 501 TCATCCAAGCAATGTAAAAATCACAGGAATTCCAATCAGGCCGCAATTTG 550
|||.||.|||||.||.||.|||||.||.|||||.|||.|...|||.||||
BL01366___ugt 501 TCACCCTAGCAACGTCAAGATCACGGGCATTCCGATCCGCAGGCAGTTTG 550
BSNT_03269___ 551 AAGAATCCATGCCGGTTGGCCCGATATATAAA---------AAGTACAAT 591
|||||...| |||.| |.|.||||| |||||..|.
BL01366___ugt 551 AAGAAGAAA-------TGGAC--AAAGATAAAATCTACGAGAAGTATCAG 591
BSNT_03269___ 592 CTTTCACCAAACAAAAAAGTGCTTCTGATCATGGCAGGTGCCCACGGTG- 640
||.||.||..||||.||..|..|.||||||||||||||.||||||||.|
BL01366___ugt 592 CTGTCTCCCGACAAGAAGATATTGCTGATCATGGCAGGCGCCCACGGGGT 641
BSNT_03269___ 641 TATTAAAGAACGTAAAAGAGCTGTGCGAAAACCTTGTCAAGGATGACCAA 690
|.||||| |||||||||||.|||||.|||...||.||.|.|.|.||..|.
BL01366___ugt 642 TCTTAAA-AACGTAAAAGAACTGTGTGAATCTCTGGTGACGAAAGAGGAT 690
BSNT_03269___ 691 GTGCAAGTGGTTGTCGTGTGCGGGAAAAATACG--GCT----------TT 728
||.|||||.||||||||||||||.||||||||| ||| ||
BL01366___ugt 691 GTTCAAGTCGTTGTCGTGTGCGGAAAAAATACGATGCTGAAATCTTCATT 740
BSNT_03269___ 729 AAAAGAATCTTTGAGTGCGCTTGAGGCGGAAA-ATGGTGACAAATTAAAA 777
..|||| |.|||| .||.|||.|..| ||| |.|.|||.||
BL01366___ugt 741 GGAAGA--CATTGA-AGCCCTTTATCC--AAACAAGCTGAGAA------- 778
BSNT_03269___ 778 GTTCTGGGCTATGTGGAGCGCATTGATGAGCTATTTCGGATCACAGATTG 827
..||.||.||..|.||..|.|||||.|||||.||..||.|..||||.||
BL01366___ugt 779 -CGCTCGGTTACATCGAAAGAATTGACGAGCTGTTCAGGGTGGCAGACTG 827
BSNT_03269___ 828 CATGATTACCAAGCCCGGCGGCATTACTTTGACAGAAGCCACAGCCATTG 877
||||||.||.|||||.|||||.||.||..||||.||.|||||.||.||.|
BL01366___ugt 828 CATGATCACAAAGCCGGGCGGAATCACCCTGACGGAGGCCACGGCAATCG 877
BSNT_03269___ 878 GAGTGCCTGTCATTCTGTACAAACCCGTGCCTGGCCAGGAAAAAGAAAAT 927
|.||.||.|||||.||.|||||.||.||.||.||.||||||||.||||||
BL01366___ugt 878 GCGTTCCCGTCATCCTTTACAAGCCTGTTCCCGGACAGGAAAAGGAAAAT 927
BSNT_03269___ 928 GCAAACTTCTTTGAAGACCGCGGAGCTGCCATCGTTGTGAACCGTCATGA 977
||....|||||.||||||.|.||.|||||||||||.||.|||.|.|||||
BL01366___ugt 928 GCCCTGTTCTTCGAAGACAGAGGGGCTGCCATCGTCGTCAACAGGCATGA 977
BSNT_03269___ 978 AGAGATTCTCGAATCAGTCACTTCCCTTCTTGCAGATGAAGATACCTTGC 1027
.||||||||.||.||||||.||||||||.|.||.|||| |||.|...|..
BL01366___ugt 978 GGAGATTCTTGAGTCAGTCTCTTCCCTTTTGGCTGATG-AGAAAAAATTA 1026
BSNT_03269___ 1028 ATCG-CATGAAGAAAAACATTAAGGACCTTCATTTAGCAAACTCCTCTGA 1076
|.|| .|||||||||||||||||...|||.||||||.|.||.||.||.||
BL01366___ugt 1027 AACGAAATGAAGAAAAACATTAAAAGCCTGCATTTATCCAATTCATCAGA 1076
BSNT_03269___ 1077 AGTGATTTTAGA-GGATATCCTGAAGGAATCAGAAATGATGACTGCCAAA 1125
|||.||..| || |||.||..|..||.|.||.|||||.||.| || ||
BL01366___ugt 1077 AGTCATCCT-GACGGACATTATCGAGCAGTCTGAAATCATCA-TG---AA 1121
BSNT_03269___ 1126 CAAAAAGCCAAA--------GTGCTATCGTAA 1149
|||||| .||.| |.|||.||.|||
BL01366___ugt 1122 CAAAAA-ACAGACTGTCCGGGCGCTGTCCTAA 1152
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