Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04410 and BL01357

See Amino acid alignment / Visit BSNT_04410 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence dna-align/BSNT_04410___amyC.1.5803.seq
#    -bsequence dna-align/BL01357___amyC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04410___amyC-BL01357___amyC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04410___amyC-BL01357___amyC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04410___amyC
# 2: BL01357___amyC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 875
# Identity:     587/875 (67.1%)
# Similarity:   587/875 (67.1%)
# Gaps:          88/875 (10.1%)
# Score: 1901.0
# 
#
#=======================================

BSNT_04410___      1 ATGAGAGCCGCCCGTACAAAAAGCATGCGGATCATTACGCTTCTTGCAGC     50
                     ||  ||..||||...|.||||||.|           |||         |.
BL01357___amy      1 AT--GAATCGCCAAGAGAAAAAGAA-----------ACG---------GG     28

BSNT_04410___     51 CATTGTGGCCTGTGC-----GCA-----------TTTT------ATTCCT     78
                     |..|||||.||.|||     |||           ||||      |||||.
BL01357___amy     29 CGCTGTGGACTTTGCTGGCTGCATGGATTACCGTTTTTCACCTGATTCCG     78

BSNT_04410___     79 TTTTATATCCTGCTGACCACTTCATTGAAAGCAAAAGGAGACTACAGTTC    128
                     ||||||||..|||||||.||..|..||||||||||.|||||.|.||||||
BL01357___amy     79 TTTTATATTTTGCTGACGACGGCGCTGAAAGCAAAGGGAGATTTCAGTTC    128

BSNT_04410___    129 GAAATGGATATTTCCAGCCGACATCTCCTTTCATAATTTTTCAGAGGCGT    178
                     .|||||||..||.||.|.|||.|||..|.|...|||||||.||||.||.|
BL01357___amy    129 AAAATGGAAGTTCCCGGACGAAATCAGCCTCGGTAATTTTGCAGAAGCAT    178

BSNT_04410___    179 GGG----AGCGCGCTTCGCTAGGAAACTCTTTTATAAACACCATG--ATC    222
                     |||    |||..|..|.||..|    |||.|||.|.||.||  ||  .|.
BL01357___amy    179 GGGATAAAGCAGGTCTGGCCGG----CTCGTTTTTCAATAC--TGCTGTG    222

BSNT_04410___    223 ATCACAGGTTTT-----------TCTGCCTTGTTATTAATTATATTCGGC    261
                     |||||   ||||           |||||        |.|||.|..|||||
BL01357___amy    223 ATCAC---TTTTGCTTCGGCGGCTCTGC--------TCATTGTGATCGGC    261

BSNT_04410___    262 TCACTTGCCGCCTACCCGCTTGCCCGGCGGGAAACGAAACTGAATAAAGC    311
                     ||.||.||.||.||.|||||.|||.||||...|||.||.||.|||.||||
BL01357___amy    262 TCTCTGGCGGCATATCCGCTCGCCAGGCGCAGAACAAAGCTCAATCAAGC    311

BSNT_04410___    312 CGTTTTTGCCTTGCTGATT-TC--CATTATGATCATCCCTCCGTTAACGT    358
                     |||||   .|||.|||.|| ||  ||||||||||||.||.|||.|.||.|
BL01357___amy    312 CGTTT---ACTTCCTGTTTATCGGCATTATGATCATTCCGCCGCTGACAT    358

BSNT_04410___    359 CCATGGTTCCTTTGTACCGAATGGTCGTGGACGC-CGGAATGGTCAATAC    407
                     |||||||||||||.|||..||||||.||||| || .||.|||.|.|||||
BL01357___amy    359 CCATGGTTCCTTTATACAAAATGGTGGTGGA-GCTTGGCATGCTGAATAC    407

BSNT_04410___    408 ACACGCAATCGCCATTTTCATCAATACAGCGGCTTACATGCCTTTAACCG    457
                     .|..|.||||||.||.||.|..|||||.||||||||.|||||.||.||..
BL01357___amy    408 GCTTGAAATCGCGATATTGAATAATACGGCGGCTTATATGCCCTTGACGA    457

BSNT_04410___    458 TATTCTTATATTCAGGCTTTATCCGATCGACCATTCCAAAAGAGCTTGAA    507
                     |.||.||.|||.|.||.||||||||.|||||.|||||.||||||||||||
BL01357___amy    458 TTTTTTTGTATGCCGGATTTATCCGGTCGACGATTCCGAAAGAGCTTGAA    507

BSNT_04410___    508 GAAGCTGCAAGAATTGACGGCGCAGGCATGCTGAAAATCTTTTTTACGAT    557
                     ||.|||||.|||||.|||||.||..|||.|..|...||.||.||.|..||
BL01357___amy    508 GAGGCTGCGAGAATCGACGGGGCGAGCACGGCGGGGATTTTCTTCAGAAT    557

BSNT_04410___    558 TGTGTTTCCTCTGCTGAAGCCGATCACTGCGACCATCTGTATTATTTCTT    607
                     .||.||||||.|..|.||||||.|.||||||||.||.||.||||||.|.|
BL01357___amy    558 CGTCTTTCCTTTATTAAAGCCGGTGACTGCGACGATTTGCATTATTGCCT    607

BSNT_04410___    608 GTGTCTTTATTTGGAACGACTATCAATTTGCCATTTTCTTTTTACAAGAT    657
                     |.||.||.||.||||||||||||||.|||.|.||.||.||..|.||||| 
BL01357___amy    608 GCGTATTCATCTGGAACGACTATCAGTTTTCGATCTTTTTCCTTCAAGA-    656

BSNT_04410___    658 CAAAAG-GTTCAGACATTAACAGTAGCCATGGCAGGTTTTTTCGGAGAAA    706
                     |||||| ||.|||||.||.||.|||||.||.||.||.||.||.||..|||
BL01357___amy    657 CAAAAGTGTGCAGACTTTGACTGTAGCGATTGCCGGCTTCTTTGGGCAAA    706

BSNT_04410___    707 ACGCAAACAACCTTCATTTAGTTGCCGCAGCGGCACTTATGGCAATGCTG    756
                     |.||.||||||||.||.||.||.|||||.||..|.||.|||||.||||||
BL01357___amy    707 ATGCGAACAACCTGCACTTGGTGGCCGCGGCTTCGCTGATGGCGATGCTG    756

BSNT_04410___    757 CCGATGGTTGTTCTGTTTTTGGCGCTGCAAAAATACTTTATTGCCGGCCT    806
                     ||||||....||||.|||||....||||||||.||||||||....||..|
BL01357___amy    757 CCGATGACGATTCTATTTTTATTCCTGCAAAAGTACTTTATAAAAGGATT    806

BSNT_04410___    807 GTCTTCCGGAGCGGTAAAGGGTTAA    831
                     .||..|.||||||.||||.||.||.
BL01357___amy    807 ATCAGCAGGAGCGCTAAAAGGCTAG    831


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04410 and BL01357

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
