Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01173 and BL01354

See Amino acid alignment / Visit BSNT_01173 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence dna-align/BSNT_01173___cotJC.1.5803.seq
#    -bsequence dna-align/BL01354___cotJC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01173___cotJC-BL01354___cotJC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01173___cotJC-BL01354___cotJC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01173___cotJC
# 2: BL01354___cotJC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 575
# Identity:     448/575 (77.9%)
# Similarity:   448/575 (77.9%)
# Gaps:          10/575 ( 1.7%)
# Score: 1700.5
# 
#
#=======================================

BSNT_01173___      1 ATGTGGGTGTATGAAAAGAAGCTGCAATACCCTGTCAAGGTCAGTACGTG     50
                     ||||||.|.|||||.||.||.|||||.||.|||||.|.|||.||....||
BL01354___cot      1 ATGTGGCTTTATGAGAAAAAACTGCAGTATCCTGTTAGGGTGAGAGAATG     50

BSNT_01173___     51 CAACCCGACGCTGGCGAAGTATTTGATTGAGCAGTATGGCGGAGCGGACG    100
                     |||.||||..||.||.||.|.||||||||||||.||.|||||||||||||
BL01354___cot     51 CAATCCGAGACTTGCCAAATTTTTGATTGAGCAATACGGCGGAGCGGACG    100

BSNT_01173___    101 GCGAGCTGGCCGCGGCTCTCCGGTATTTGAACCAGCGTTATACGATTCCT    150
                     ||||..||||.|||||.||.||.||||||||||||||.||.|..||.||.
BL01354___cot    101 GCGAATTGGCTGCGGCGCTTCGCTATTTGAACCAGCGCTACAGCATACCC    150

BSNT_01173___    151 GATAAGGTCATCGGCCTTTTAACAGATATCGGCACGGAGGAGTTTGCCCA    200
                     |||||.|||.||||.||..|.||.||.|||||.|||||.||||||||.||
BL01354___cot    151 GATAAAGTCGTCGGACTGCTGACGGACATCGGTACGGAAGAGTTTGCTCA    200

BSNT_01173___    201 TTTGGAAATGATTGCGACCATGGTCTATAAGTTAACGAAAGACGCCACAC    250
                     ..|.|||||||||||.||.|||||.|||||.|||||.||||||||.||.|
BL01354___cot    201 CCTTGAAATGATTGCCACGATGGTATATAAATTAACAAAAGACGCGACGC    250

BSNT_01173___    251 CGGAGCAGCTGCGTGAAGCTGGGCTTGGCGATCATTACGTCA-ATCACGA    299
                     |.||||||.||...|||||.|||||.||||||||||||| || |.||.||
BL01354___cot    251 CCGAGCAGATGAAGGAAGCCGGGCTCGGCGATCATTACG-CAGACCATGA    299

BSNT_01173___    300 CAGCGCGCTTTTTTATCATAATGCGGCGGGCGCGCCGTTTACCGCGAGCT    349
                     ||..||.||.|||||||||||.||.||.||||..|||||.|||||.|..|
BL01354___cot    300 CAAAGCCCTGTTTTATCATAACGCTGCCGGCGTTCCGTTCACCGCTACAT    349

BSNT_01173___    350 ATATCCAAGCGAAGGGCGATCCGATTGCCGATTTATACGAAGATATTGCC    399
                     |.|||||.||.||.|||||||||||||||||||||||.||||||||.||.
BL01354___cot    350 ACATCCAGGCAAAAGGCGATCCGATTGCCGATTTATATGAAGATATAGCG    399

BSNT_01173___    400 GCAGAAGAAAAGGCGCGGGCGACGTATCAATGGCTGATTGATATTTCGGA    449
                     ||.||||||||.|||.||||.||||||||||||||||||||.||.|||||
BL01354___cot    400 GCTGAAGAAAAAGCGAGGGCTACGTATCAATGGCTGATTGACATGTCGGA    449

BSNT_01173___    450 TGATCCTGATTTAAACGATTCCCT-GCGTTTTTTGCGAGAGCGTGAAATC    498
                     ||||||.||||||||.||....|| ||| |||||.||.||..|.||||||
BL01354___cot    450 TGATCCGGATTTAAATGACGGGCTGGCG-TTTTTACGGGAAAGGGAAATC    498

BSNT_01173___    499 GTACACTCTATGCGCTTCAGAGAAGCGGTTGAAATTTTAAAAGAAGAACG    548
                     ||.||.||...|||||||.|.|||||.||.||||||||.||.|||||.||
BL01354___cot    499 GTTCATTCACAGCGCTTCCGCGAAGCTGTCGAAATTTTGAAGGAAGAGCG    548

BSNT_01173___    549 GGA---TAAAAAGAAGATTTTCTAA    570
                     .||   |||||  ||| |.||.|||
BL01354___cot    549 CGACCGTAAAA--AAG-TGTTTTAA    570


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