Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01835 and BL01343
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:20
# Commandline: needle
# -asequence dna-align/BSNT_01835___yisL.1.5803.seq
# -bsequence dna-align/BL01343___yisL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01835___yisL-BL01343___yisL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01835___yisL-BL01343___yisL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01835___yisL
# 2: BL01343___yisL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 257/384 (66.9%)
# Similarity: 257/384 (66.9%)
# Gaps: 54/384 (14.1%)
# Score: 823.5
#
#
#=======================================
BSNT_01835___ 1 ATGACACACCTACATATTACGACATGGGTGGTAGCGCTGATTCTGCTTTT 50
|||||.||..|.|||||.|||.|.||||||.|.|||||.|||.|..|.||
BL01343___yis 1 ATGACGCATATGCATATCACGTCTTGGGTGATCGCGCTCATTTTAGTGTT 50
BSNT_01835___ 51 CGTCAGC-TACTCGCTGTATTCGTCAGG-AAGTGCAAAGGGCGCAAAAAT 98
||| .|| |||..|||.||.||.||.|| ||..||||| |||||||||||
BL01343___yis 51 CGT-TGCTTACGGGCTTTACTCATCTGGAAACAGCAAA-GGCGCAAAAAT 98
BSNT_01835___ 99 CACTCATATGATTCTGCGGTTATTCTA---TATCCTTATTATTTTGACAG 145
.||.|||||||||||.||.|||||||| ||||.||||.||| ||.|
BL01343___yis 99 TACACATATGATTCTCCGCTTATTCTATATTATCGTTATCATT---ACCG 145
BSNT_01835___ 146 GAGCTGAGCTGTTTGTCCGTTT--CGCCAACTGGAACGGAGAATAC---- 189
|.||..||||.|||.|....|| ||.|| |||||||||||||||
BL01343___yis 146 GGGCGCAGCTTTTTTTAAAGTTCACGGCA--TGGAACGGAGAATACATAG 193
BSNT_01835___ 190 -----GCCGGCAAAATGATT-CTGGGCATTATCACCATCGGCCTGATGGA 233
||| || ||.|||.|.|||||||||||..|.|||||
BL01343___yis 194 CGAAGGCC----------TTGCTCGGCCTCATCACCATCGGATTCATGGA 233
BSNT_01835___ 234 AATGCTCCTCATCCGCAAGAAAAAAGAAAAATCAACAGGAGGCC------ 277
||||||..|.|||||||.||||||.|.|||| |.||||
BL01343___yis 234 AATGCTTTTAATCCGCAGGAAAAACGGAAAA-------GCGGCCACTGGG 276
BSNT_01835___ 278 -TGTGGATCGGCTTCGTCATTGTCCTTTTGC---TGACAGTGCTGCTCGG 323
|.|||||||||| |.||||||.||.||| ||||.||..||||.||
BL01343___yis 277 ATCTGGATCGGCT---TTATTGTCGTTCTGCTCTTGACGGTTGTGCTTGG 323
BSNT_01835___ 324 TCTGCATTTGCCAATTGGTTTTCAATTGTTTTAA 357
.||.|...|.||..|.||.|||.||.||||||||
BL01343___yis 324 ACTCCGGCTTCCGCTGGGCTTTAAAGTGTTTTAA 357
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