Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01839 and BL01342
See
Amino acid alignment /
Visit
BSNT_01839 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_01839___asnO.1.5803.seq
# -bsequence dna-align/BL01342___asnO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01839___asnO-BL01342___asnO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01839___asnO-BL01342___asnO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01839___asnO
# 2: BL01342___asnO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1881
# Identity: 1410/1881 (75.0%)
# Similarity: 1410/1881 (75.0%)
# Gaps: 75/1881 ( 4.0%)
# Score: 5067.5
#
#
#=======================================
BSNT_01839___ 1 ATGTGTGGAATTACGGGTTGGGTCGATTTTAAAAAGCAGCTCGTCC-AGG 49
|||||||||||.|||||.||||||||||||||.||||.|||.|||| ||.
BL01342___asn 1 ATGTGTGGAATAACGGGGTGGGTCGATTTTAAGAAGCCGCTTGTCCGAGA 50
BSNT_01839___ 50 AAAAACAAACGATGGACAGAATGACAGACACTCTTTCCAAACGAGGGCCT 99
..|..|||.| |||||.|..|||||.||.||.|||||.|||.||||.|||
BL01342___asn 51 GCAGTCAATC-ATGGAGAAGATGACTGATACGCTTTCGAAAAGAGGACCT 99
BSNT_01839___ 100 GATGATTCAAACGTTTGGGGGGAGCACCATGTTTTATTCGGACATAAAAG 149
||||||.|.||..|||||||..|||.||||||||||||||||||||||.|
BL01342___asn 100 GATGATACGAATATTTGGGGAAAGCGCCATGTTTTATTCGGACATAAACG 149
BSNT_01839___ 150 ACTT-GCAGTTGTTGATATTGAAGGAGGACGCCAGCCGATGGCGTGTACC 198
||| ||||||||.|||.|.|||||.||..|.|||||||||.|..|.||.
BL01342___asn 150 -CTTGGCAGTTGTGGATCTGGAAGGCGGCAGACAGCCGATGACCCGCACA 198
BSNT_01839___ 199 TATAAAGGGGATACG--TACACCATTATTTACAATGGCGAGCTGTATAAC 246
.||.|| |||||.| ||.||.|||...||.|||||||||||.|||||.
BL01342___asn 199 CATCAA--GGATATGATTATACGATTTGCTATAATGGCGAGCTCTATAAT 246
BSNT_01839___ 247 ACGGAAGATTTGCGCAAAGAATTGCGGGCGCGGGGCCATCAATTC--GAG 294
|||||.||||||||.|||||..|..||..||||||.||||||||| |||
BL01342___asn 247 ACGGAGGATTTGCGAAAAGAGCTTAGGCGGCGGGGGCATCAATTCAAGAG 296
BSNT_01839___ 295 CGTACGTCAGATACCGAGG---TGCTTC-TGCACAGCTACATCGAGTGGC 340
| .|| ||||||||.|||| |||||| |.|| |||||.||.|||.
BL01342___asn 297 C-CAC-TCAGATACAGAGGTTTTGCTTCATTCA----TACATGGAATGGA 340
BSNT_01839___ 341 AGGAAGACTGTGTCGACCATCTCAATGGCATATTCGCTTTCGCTGTGTGG 390
|.||.||.||..|||||...||.||.||.||.||.||.||.||.||.|||
BL01342___asn 341 AAGAGGAATGCATCGACAGGCTGAACGGAATTTTTGCATTTGCGGTATGG 390
BSNT_01839___ 391 GATGAAAAGCGTAATCTGCTGTTTGCCGCGAGAGACCGTCTCGGTGTAAA 440
|||||||||||..||||.||.|||||.||..|.|||||.||.|||||.||
BL01342___asn 391 GATGAAAAGCGGGATCTTCTTTTTGCGGCACGCGACCGGCTTGGTGTTAA 440
BSNT_01839___ 441 GCCGTTTTTTTACA-CGAAGGAAGGCTCTTCATTTCTCTTCGGGTCGGAA 489
.|||||.||||||| |||| .|.|||||.||||||.|.|||||.||.|||
BL01342___asn 441 ACCGTTCTTTTACACCGAA-CAGGGCTCATCATTTTTGTTCGGATCTGAA 489
BSNT_01839___ 490 ATCAAAGCAATCCTCGCGCACCCTGATATAAAAGCGCGAGTGGACAGAAC 539
||||||||.||||||||.||.|||||..|.|||||....||.|||.|..|
BL01342___asn 490 ATCAAAGCCATCCTCGCTCATCCTGAAGTGAAAGCAAAGGTAGACCGTTC 539
BSNT_01839___ 540 GGGACTTTCTGAAATTTTCGGTCTTGGACCGTCCAGAACCCCGGGCACTG 589
.||.||..|.|||||||||||.||.||.|||||..||.|.|||||.|..|
BL01342___asn 540 AGGGCTGGCAGAAATTTTCGGCCTCGGCCCGTCACGATCGCCGGGGAGCG 589
BSNT_01839___ 590 GCATATTTAAAGGTATAAAAGAAATCCGCCCGGCTCATGCGCTGACATTT 639
|..|.||||||||..||||.||.||||||||||..||||||.|||..||.
BL01342___asn 590 GTGTTTTTAAAGGAGTAAAGGAGATCCGCCCGGGGCATGCGATGATTTTC 639
BSNT_01839___ 640 TCCAAAGACGGACTTAA-TATTTGGCGTTATTGGAATGTTGAAAGCGAAA 688
||.|||||||| .|||| ..|||||||.||.||||||||..|||||||.|
BL01342___asn 640 TCAAAAGACGG-TTTAACGGTTTGGCGCTACTGGAATGTGAAAAGCGAGA 688
BSNT_01839___ 689 AACATACGGACAGTTTTGATGACACGGTTGCCAATGTCAGATCGTTATTT 738
|.|||||||||||.|||||.||.|||||.|..|||||..|.|||.|.|||
BL01342___asn 689 AGCATACGGACAGCTTTGACGAAACGGTGGAAAATGTGCGGTCGCTGTTT 738
BSNT_01839___ 739 CAGGACGCGGTGACGCGGCAGCTTGTGTCGGATGTGCCTGTTTGCACATT 788
||||||||.||.||..|||||||||||||.||||||||.||.||.||.||
BL01342___asn 739 CAGGACGCCGTTACAAGGCAGCTTGTGTCTGATGTGCCGGTATGTACGTT 788
BSNT_01839___ 789 CCTATCAGGCGGTCTGGACTCAAGCGCAATTACAGCGATTGCGGCGGGC- 837
..||||.||.||..|.||.||.|||||.|||||.||.| ||||.|.|
BL01342___asn 789 TTTATCTGGAGGGGTCGATTCGAGCGCCATTACCGCAA---CGGCCGCCA 835
BSNT_01839___ 838 --CATTTTGAAAAGGAAGGAAAAGCACCGCTTCATACTTATTCGATTGAT 885
|||||.||.|..|||||.||.||.||.||||||||.|.||||||.|||
BL01342___asn 836 AGCATTTCGAGAGAGAAGGGAAGGCGCCCCTTCATACGTTTTCGATCGAT 885
BSNT_01839___ 886 TACGAAGAGAACGATAAATTTTTTCAAG-CAAGCGCTTTTCAGCCGAATG 934
||.|||||.||.||..|||.|||| |.| |||||.|.||||||||.||.|
BL01342___asn 886 TATGAAGACAATGAGCAATATTTT-ACGTCAAGCTCATTTCAGCCAAACG 934
BSNT_01839___ 935 ATGACGGACCATGGATTGAAAAAATGACAGAGGCTTTCGGCACAACG--- 981
..|||||.||.||||||.||||||||.|.||.||.||||| ||||
BL01342___asn 935 CCGACGGCCCGTGGATTAAAAAAATGTCCGATGCATTCGG---AACGGTT 981
BSNT_01839___ 982 CACCACAAATGCGTCATCAGCCAAAAAGATCTCATTGATCATTTGGAGGA 1031
||.|||||.|||||.||...|||..|.||.||...||...|||||||.||
BL01342___asn 982 CATCACAATTGCGTGATATCCCAGGAGGAGCTGGCTGCCTATTTGGAAGA 1031
BSNT_01839___ 1032 AGCTGTACTGGTCAAAGACTTGCCGGGAATGGCGGATGTCGACTCATCCC 1081
|||.||||||||....||.||||||||.|||||.||||||||.||.||||
BL01342___asn 1032 AGCCGTACTGGTTCGGGATTTGCCGGGGATGGCTGATGTCGATTCTTCCC 1081
BSNT_01839___ 1082 TGCTGTGGTTTTGCCGGGAAATCAAAAAGGACTTTGTCGTCAGCCTATCG 1131
||||.|||||.|||||.||.||.|||||.|||||||||||.|||||.||.
BL01342___asn 1082 TGCTATGGTTCTGCCGCGAGATTAAAAAAGACTTTGTCGTGAGCCTTTCA 1131
BSNT_01839___ 1132 GGAGAGTGCGCGGATGAGATTTTCGGCGGGTACCCGTGGTTCCATACGGC 1181
||.||.||||||||.||.|||||||||||.||.||.|||||||||.||||
BL01342___asn 1132 GGGGAATGCGCGGACGAAATTTTCGGCGGCTATCCTTGGTTCCATTCGGC 1181
BSNT_01839___ 1182 AGATGTTGAGTCTGGCTTTCCATGGATGAGATCAACGGAGGAGCGGATCA 1231
|||.|.||.|...||.||.||||||||||||||||.|||.||.|||||
BL01342___asn 1182 AGAAGATGTGAAAGGTTTCCCATGGATGAGATCAATGGAAGAACGGAT-- 1229
BSNT_01839___ 1232 AGCTGCTTTCT----GACTCATGGCAGAAAAAATTGAATCTGAAAGAATA 1277
|.|..|||| |||...|||||||||||..||||.||.|..|||||
BL01342___asn 1230 --CGGACTTCTGCAGGACGGCTGGCAGAAAAAGCTGAACCTCAGCGAATA 1277
BSNT_01839___ 1278 CGTAAATGCCAAATATGAAGAAACCTTGGCAGAAACGCCATTATTAGATG 1327
.||.||.||.||||||||.|||||..|...||||||.||..|..|.||.|
BL01342___asn 1278 TGTGAAGGCAAAATATGAGGAAACAGTTAAAGAAACACCGCTGCTGGAAG 1327
BSNT_01839___ 1328 GTGAAACGGGTGTGGATAAAGCAAGAAGACAGCTGTTCTATTTAAATATG 1377
|.||||||||||.|||.|||..|||.|||.|||||||.||.|||||||||
BL01342___asn 1328 GAGAAACGGGTGCGGAGAAACGAAGGAGAGAGCTGTTTTACTTAAATATG 1377
BSNT_01839___ 1378 CTTTGGTTTATGACGAAC-CTTTTGGATCGGAAGGATCGCATGAGCATGG 1426
||.||||||||||| ||| ||.||||||||.||.||..|.||||||||||
BL01342___asn 1378 CTCTGGTTTATGAC-AACGCTCTTGGATCGAAAAGACAGAATGAGCATGG 1426
BSNT_01839___ 1427 GGGCGAGCCTGGAAGTGCGGGTGCCGTTCGCCGATCACCGGCTTGTGGAA 1476
|.||||||||.||.||..||||.|||||.||.||||||.|||||||.||.
BL01342___asn 1427 GTGCGAGCCTCGAGGTCAGGGTTCCGTTTGCAGATCACAGGCTTGTCGAG 1476
BSNT_01839___ 1477 TATGTTTGGAATATTCCGTGGGAAATGAAAATGCATGATAATCGGGAAAA 1526
|||||.|||||||||||.|||||..|.||||||||||..|..||.|||||
BL01342___asn 1477 TATGTCTGGAATATTCCATGGGATGTCAAAATGCATGGCAGCCGTGAAAA 1526
BSNT_01839___ 1527 AGGCATTTTACGCAAAGCGCTTGAAGGTATTTTGCCTGATGACATTCTGT 1576
||||||.||.|||||.|||||.|||||.||||||||||||||..|.||||
BL01342___asn 1527 AGGCATCTTCCGCAAGGCGCTGGAAGGCATTTTGCCTGATGAAGTGCTGT 1576
BSNT_01839___ 1577 ATCGCAAAAAAAGCCCGTATCCGAAAACACATCATCCGGAATATACAAAA 1626
|.||||||||||||||.|||||||||||.||.||.||||..|||||.|||
BL01342___asn 1577 ACCGCAAAAAAAGCCCATATCCGAAAACGCACCACCCGGCCTATACGAAA 1626
BSNT_01839___ 1627 GGCGTCA---GCGAATGGCTGAAAACGA-TCA-----GAAGCCAAAAGGA 1667
|.|||.| || |||||| || ||| |.|| |||||.||
BL01342___asn 1627 GCCGTGATACGC---TGGCTG-----GAGTCATTGCTGGAG-CAAAAAGA 1667
BSNT_01839___ 1668 CTCCGTGCTCCATACCTTGCT--GGACAGAAAACAATTAGATCAGCTTTT 1715
|||.|.||||.|| .|||.|| |.|.|||||| ||.|.||.|.|||..|
BL01342___asn 1668 CTCGGCGCTCTAT-GCTTTCTTAGAAAAGAAAA-AACTGGAGCGGCTGAT 1715
BSNT_01839___ 1716 AGAAACGGAAGGCTCCTC-CTTCAAGGTGCCGTGGTTCGGACAGCTCATG 1764
.||.||||||||..|.|| .||||| ||.|||||||.||||||..|.|||
BL01342___asn 1716 TGAGACGGAAGGTGCATCATTTCAA-GTTCCGTGGTACGGACAATTGATG 1764
BSNT_01839___ 1765 AAGGGACCTCAGCTGATCGCCCATCTTGCTCAAATTCATACATGGTTTGA 1814
||||||||.||||||||||||||.|||||.|||||.|||||.||||||||
BL01342___asn 1765 AAGGGACCGCAGCTGATCGCCCACCTTGCCCAAATCCATACTTGGTTTGA 1814
BSNT_01839___ 1815 AGCGTATCGCATTGATATTGATGAAGGATAA 1845
|...|||||.||||||||.||.|| ||||
BL01342___asn 1815 AAGTTATCGAATTGATATCGAGGA---ATAA 1842
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.