Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01848 and BL01338
See
Amino acid alignment /
Visit
BSNT_01848 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_01848___yisS.1.5803.seq
# -bsequence dna-align/BL01338___yisS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01848___yisS-BL01338___yisS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01848___yisS-BL01338___yisS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01848___yisS
# 2: BL01338___yisS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1065
# Identity: 748/1065 (70.2%)
# Similarity: 748/1065 (70.2%)
# Gaps: 72/1065 ( 6.8%)
# Score: 2411.5
#
#
#=======================================
BSNT_01848___ 1 GTG---GAACATCAAGTAAGGTGCGCAGTATTAGGGCTAGGAAGGCTGGG 47
.|| |||..| ||.||.|||||.|||||.|||||.||||||||.||
BL01338___yis 1 ATGACAGAAGTT---GTGAGATGCGCCGTATTGGGGCTTGGAAGGCTCGG 47
BSNT_01848___ 48 TTATTATCATGCGAAAAATCTCGTCACC-AGTGTACCGGGGGCAAAGCTG 96
.|||||.|||||||||||.|||...||| || ||.||.||.|....|||.
BL01338___yis 48 CTATTACCATGCGAAAAACCTCAAAACCGAG-GTGCCCGGAGTCCTGCTC 96
BSNT_01848___ 97 GTTAGTGTCAG-TGATCCGTTAAAAGGGAGAGCAGA-GCAGGTTGCCAG- 143
|....||| || .||||||..|.|.||.||.|| || |.|||||| |||
BL01338___yis 97 GCCGCTGT-AGCCGATCCGGCAGAGGGAAGTGC-GAGGGAGGTTG-CAGC 143
BSNT_01848___ 144 AGAATTCGGTATCGAAAAATGGTCAGAGGACCCGTATGAAGTG--TTAGA 191
.|||.|.|||.|.|||||.||||..||.|||||||.|| |||| |..|
BL01338___yis 144 TGAACTGGGTGTTGAAAAGTGGTTTGAAGACCCGTTTG-AGTGCCTCCG- 191
BSNT_01848___ 192 AGATCCCGGCATTGATGCTGTCATTATCGTAACGCCGACAAGCACACATG 241
.|||||.|..||||||||.||..|.|||||.||.||||||..|||.||||
BL01338___yis 192 CGATCCGGAAATTGATGCCGTTGTCATCGTTACACCGACATCCACTCATG 241
BSNT_01848___ 242 GTGATATGATCATCAAAGCAGCCGAGAACGGCAAACAGATCTTCGTTGAA 291
..||.|||||||...|.||||||||...||||||||||||.||.||.||.
BL01338___yis 242 CCGAAATGATCAAACAGGCAGCCGAATTCGGCAAACAGATTTTTGTGGAG 291
BSNT_01848___ 292 AAACCGCTGACATTAAGCCTTGAGGAATCAAGAGCAG---TTTCTGAAAA 338
||.|||||||||||||..|||||.||.||||.||.|| |||| .||
BL01338___yis 292 AAGCCGCTGACATTAAATCTTGAAGAGTCAATAGAAGTCATTTC---CAA 338
BSNT_01848___ 339 AGTGAAAGAGACAGGTGTCATCTGCCAAGTCGGCTTTATGAGACGATTCG 388
.||.|||||.|..||.||.||.|||||.||.||.||||||||.||.||.|
BL01338___yis 339 GGTCAAAGAAATGGGCGTGATTTGCCAGGTGGGGTTTATGAGGCGGTTTG 388
BSNT_01848___ 389 ATCCCGCATACGCAGATGCCAAACGGCGGATCGACGCTGGAGAAATCGGC 438
||||.||.||.||.|||||||||.|..|||||||.||.|||||.||||||
BL01338___yis 389 ATCCTGCTTATGCGGATGCCAAAAGAAGGATCGATGCCGGAGAGATCGGC 438
BSNT_01848___ 439 AAACCTATCTATTATAAAGGCTTTACGCGCGACCAAGGCGCGCCTCCCGC 488
|||||.||||||||||||||.|||||||||||....|||.|.|||||.||
BL01338___yis 439 AAACCGATCTATTATAAAGGGTTTACGCGCGATTTTGGCTCTCCTCCGGC 488
BSNT_01848___ 489 AGAATTTATCAAACACAGCGGTGGAATTTTCATCGACTGTTCCATCCATG 538
.|||||.||||||.|.|||||.||.||||||.||||.|||||.||.||||
BL01338___yis 489 CGAATTCATCAAAAAAAGCGGCGGTATTTTCGTCGATTGTTCGATTCATG 538
BSNT_01848___ 539 ACTATGATATTGCCCGTTATTTGCTAGGGGCGGAAATCACTTCTGTTTCA 588
|||||||.||.||.||||||||..|.|||||.|||||||||.|.|||||.
BL01338___yis 539 ACTATGACATCGCTCGTTATTTAATGGGGGCTGAAATCACTGCGGTTTCC 588
BSNT_01848___ 589 GGACACGGCAGGATTCTGAACAATCCGTTTATGGAGCAGTATGGC--GAT 636
||.|||||.|||.||.||||..|..|.||.||| .|.|.|||.| ||.
BL01338___yis 589 GGCCACGGAAGGGTTTTGAAGCACGCATTCATG--CCGGGATGCCATGAC 636
BSNT_01848___ 637 GTGGATCAGGCACTGACGTATATTGAATTTGACTCCGGCGCAGCGGGGGA 686
||.||||||||.||.||.|||||.||.|||||.||.||.||.|||||.||
BL01338___yis 637 GTCGATCAGGCGCTCACCTATATGGAGTTTGATTCGGGAGCGGCGGGTGA 686
BSNT_01848___ 687 CGTCGAGGCAAGCAGAACCTCTCCATACGGACATGACATCCGGGCGGAGG 736
.|..||.||||||.|.|..||..|.|||||.||.||.|||||.||.||..
BL01338___yis 687 TGCGGAAGCAAGCCGCAATTCGTCTTACGGCCACGATATCCGCGCCGAAA 736
BSNT_01848___ 737 TGATCGGGACAGAGGGCAGTATTTTCATAGGGACATTGAGACATC----- 781
|.|||||.||.||.|||||.||.|||||.||||...||.|..|.|
BL01338___yis 737 TCATCGGAACGGACGGCAGCATCTTCATCGGGATGCTGCGGAACCCGGCG 786
BSNT_01848___ 782 --AACATGTGACCATCCTATCGGCTAAA-GGGAGCAGTTTTGATATCATT 828
.||| ||| |..|.||| ||| ||||||||.|.|.||||||||
BL01338___yis 787 GTTACA-GTG-----CGGACCGG--AAAGGGGAGCAGCTATAATATCATT 828
BSNT_01848___ 829 CCAGACTTTCAAACTCGTTTTCATGAAGCCTACTGCTTGGAGCTTCAGCA 878
||.||.||.||..|..|.||.||||||||.|||||.||||||||.|||||
BL01338___yis 829 CCCGATTTCCAGGCGAGGTTCCATGAAGCGTACTGTTTGGAGCTGCAGCA 878
BSNT_01848___ 879 TTTCGCCGAGTGTGTCCGGAATGGAAAAAC---ACCGATTGTGACTGATA 925
|||.||.||.|||||.||.| ..||||| ||||.||||||||||..
BL01338___yis 879 TTTTGCTGATTGTGTTCGCA---TCAAAACGAAACCGCTTGTGACTGAAG 925
BSNT_01848___ 926 TTGATGCGACGATCAATTTAGAAGT-GGGCATCGCAGCAAC-CAATTCCT 973
|.||||||.||.|||||.|.|||.| |.|| |.||.||.|| ||| ||||
BL01338___yis 926 TGGATGCGGCGGTCAATCTTGAAATCGCGC-TTGCGGCCACACAA-TCCT 973
BSNT_01848___ 974 -TTCGAAGCGGCAGGCCGGTACAGCT--------AGATGTGAAGCGTGCT 1014
.|| ||..||||||||.||..||.| |||.|..|| .|||
BL01338___yis 974 GGTC-AACAGGCAGGCCCGTCAAGATTCAGTATCAGACGAAAA---AGCT 1019
BSNT_01848___ 1015 TATACAGGTATGTAA 1029
|| .||||||.
BL01338___yis 1020 TA---CGGTATGA-- 1029
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.