Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01795 and BL01326
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence dna-align/BSNT_01795___yhjN.1.5803.seq
# -bsequence dna-align/BL01326___yhjN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01795___yhjN-BL01326___yhjN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01795___yhjN-BL01326___yhjN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01795___yhjN
# 2: BL01326___yhjN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1242
# Identity: 780/1242 (62.8%)
# Similarity: 780/1242 (62.8%)
# Gaps: 174/1242 (14.0%)
# Score: 2177.0
#
#
#=======================================
BSNT_01795___ 1 TTGA-AGAAAGACGAAAATCTCCTCAAAGATCTATGGTT--TATCGCAAT 47
|||| .||||.|.| |.||.||||....|||.|||..|| |||.| ||
BL01326___yhj 1 TTGAGGGAAAAAAG-AGATTTCCTTCGGGATATATTATTGATATTG--AT 47
BSNT_01795___ 48 CAGTGCAG--CCGGGGGGTTTATTCTTTCATTAACCGGAATATCAATTGG 95
|| |||| ..|||||.|||.||||.|||||.|||||.||..||||.||
BL01326___yhj 48 CA--GCAGTTTTGGGGGATTTCTTCTCTCATTGACCGGCATGACAATCGG 95
BSNT_01795___ 96 ATGGATGATCGGAACACTGATTGTCGCC---TG-CTGCCTCGCCATGATA 141
.||||||.||||||||.|||..|.|||| || ||| |||| ||.|.
BL01326___yhj 96 CTGGATGGTCGGAACAATGACCGCCGCCGCTTGTCTG--TCGC--TGTTT 141
BSNT_01795___ 142 CGGCCGGCATGGCTGATGATGGC-ACCAGACCAAAAAGGAATTAACCGAC 190
||.|||.||..|.|||....||| ..|||| |||||.||.||..|||...
BL01326___yhj 142 CGCCCGTCACCGTTGAAAGCGGCGGTCAGA-CAAAACGGCATCCACCATG 190
BSNT_01795___ 191 GATGGCTCGCCCTCGGGCAGATGATCCTCGGCATCGAATTGGGCCAAAAG 240
|||||||.....||||.||.|||.|..|.||.||.||..|.||||||||.
BL01326___yhj 191 GATGGCTTCAGTTCGGCCAAATGCTATTGGGAATTGAGCTTGGCCAAAAA 240
BSNT_01795___ 241 CTGAATTTATCCGTTCTCTCTGTTC-TCAAAGACCATTGGTT--TTCAGT 287
.|.||..|.||.||..|.|| |.|| |.||.||..|||||.| || ||
BL01326___yhj 241 ATCAACATGTCTGTGATTTC-GATCTTTAAGGAAAATTGGCTGATT--GT 287
BSNT_01795___ 288 CGGCGTTATGCTGATATTGTCTATCCTGCTGGCCATGCTGTCAGGATATG 337
||||||.|||||..|..|.||..||.||.|.|||||||||||.||.|.||
BL01326___yhj 288 CGGCGTCATGCTTCTCCTTTCCGTCGTGTTCGCCATGCTGTCGGGCTTTG 337
BSNT_01795___ 338 TGCTT-TGGCGTTTCAGCAAAACGGATATGATGACTAGCTTTGTCGGCAC 386
| ||| |||.|.||||||||.||.||||||.||||.||||||||.||.||
BL01326___yhj 338 T-CTTGTGGAGATTCAGCAAGACAGATATGCTGACGAGCTTTGTGGGAAC 386
BSNT_01795___ 387 CGCTCCCGGCGGACTTTCCGCCATGCCGAGCATCGCACAGGAAGTAGGCG 436
.|||||||||||.||||||||.||||||.|||||||.||||||||.||.|
BL01326___yhj 387 GGCTCCCGGCGGGCTTTCCGCGATGCCGGGCATCGCTCAGGAAGTCGGAG 436
BSNT_01795___ 437 CCAATACCGCTATAGTCAGCCTCGTTCAAATGATGCGTGTGCTGCTCGTG 486
|.||.||.||.||.|||||.|||||.||.|||||.|||||.||.|||||.
BL01326___yhj 437 CGAACACGGCAATCGTCAGTCTCGTGCAGATGATACGTGTTCTTCTCGTC 486
BSNT_01795___ 487 GTGCTTTCCATTCCGTTTTTAGTCATTCTGATCTATACAAAACA---AGA 533
||..|..|||||||.|||||.||..||.|.||..||.|.||.|| .||
BL01326___yhj 487 GTCATGACCATTCCCTTTTTCGTTTTTTTCATAAATGCGAAGCATCCCGA 536
BSNT_01795___ 534 TCG-------TACCG-----CAAGT----GCCGC---AACAGAGACAATT 564
|| |.||| ||||| ||||| ||||
BL01326___yhj 537 -CGCCCATGCTGCCGGCAGCCAAGTGATGGCCGCGGGAACA--------- 576
BSNT_01795___ 565 TCTTCTGCAACGACAGATTTTAGGC--------TCGCTCCCGTTTTGTGG 606
||.|| ||||.|.|| |||| .|||
BL01326___yhj 577 ---TCGGC--------ATTTGAAGCGCCTCATATCGC---------ATGG 606
BSNT_01795___ 607 AC--CGTCATTCTTATTCTCGCTGCCTGG--------GGAGCTTGCAAAG 646
|| ||| |..||| || |||| ||.|..|||||||
BL01326___yhj 607 ACTGCGT--------TGATCG-TG-CTGGGCGGATTCGGGGTATGCAAAG 646
BSNT_01795___ 647 CTGCGAAATTTTTAAAATTTCCAGCTCCATGGCTGCTCGGCAGCATGCTC 696
||..||||....|....|||||.||.||||||||||||||.||||||..|
BL01326___yhj 647 CTATGAAAGCACTGCGGTTTCCTGCGCCATGGCTGCTCGGAAGCATGACC 696
BSNT_01795___ 697 GGTGTAGCAATTGTACATGTTGGCGGAGCTGCGGTGACAGG-----GCAC 741
||.|..||..||.|.||..|.|..||.||..|..||||.|| ||||
BL01326___yhj 697 GGCGCGGCCGTTCTGCAAATCGCGGGCGCCTCAATGACCGGACTCAGCAC 746
BSNT_01795___ 742 GACATGATGGCATGGTGGCCGTCACAAGCTAACCA-TG-TATCACAAGTA 789
.|| .||.|||||||| .||| .|||...|| || |.||.|||.|.
BL01326___yhj 747 AAC-----CGCCTGGTGGCC-CCAC-GGCTTTTCAGTGCTGTCGCAAATT 789
BSNT_01795___ 790 TTTCTCGGGGCAACGATCGGCTCTAAGATGTACAAAAGCATGTTTGCCGG 839
|.||||||.|||||||||||.||.|||||...||||...||||||..|||
BL01326___yhj 790 TGTCTCGGCGCAACGATCGGTTCAAAGATCAGCAAAGATATGTTTATCGG 839
BSNT_01795___ 840 CGTCACCCGTATTA---TCATCGTCGGGTTTGTCTCGTCCGTCGGTTTAA 886
||||| |.|..| |.|||||||...|||.|...||||||||..|.|
BL01326___yhj 840 CGTCA---GAAAAACGCTGATCGTCGCACTTGCCAGCTCCGTCGGACTGA 886
BSNT_01795___ 887 TCGCAGCAATGTTTTTGAGCGCCGTGATCGTTTCCG----AGCTGACAGG 932
||...||||||.||||.||||||| .|||..||| ||| |.||||
BL01326___yhj 887 TCATTGCAATGATTTTAAGCGCCG---CCGTCACCGCCAAAGC-GGCAGG 932
BSNT_01795___ 933 AATTTCGCTCATCACTTCTGTACTGGCATTTGCGCCCGGCGGGATTGCAG 982
.||||||||.|..||..|..||.||||.|||||.||.||.||.||.||||
BL01326___yhj 933 CATTTCGCTGACAACGGCCATATTGGCGTTTGCTCCGGGAGGAATCGCAG 982
BSNT_01795___ 983 AGATGGCGACGACGTCAGTTACCATACATGCTGATTCCACCTTTGTCGTT 1032
|.||||||||.|||||.||.||..|.||.||.||.||.||.||.|||||.
BL01326___yhj 983 AAATGGCGACAACGTCTGTCACGCTTCACGCCGACTCTACGTTCGTCGTC 1032
BSNT_01795___ 1033 GCGGTTCAGGTCATTCGCGTCATTCTGGTTATTGCCCTGCTGCCGCCGTT 1082
||.||.||.||..|..|.||..|.||.||.||.||..||||.||.||.||
BL01326___yhj 1033 GCTGTCCAAGTGTTGAGGGTGGTGCTCGTGATCGCAATGCTTCCTCCATT 1082
BSNT_01795___ 1083 TTATCGCCTGCTTCACC----ATCTTCATGGTGAAAAAAAAGACA----- 1123
.|..||..|||||||.| ||| |.|||||.|.|||
BL01326___yhj 1083 CTTCCGATTGCTTCATCAAAAATC--------GGAAAAATATACACACCC 1124
BSNT_01795___ 1124 -------AAAAGAGCTCAATCAGCGGCAGT---AGTGCCTAG 1155
||||.||| ||| ||| || ||..|
BL01326___yhj 1125 TCGCGTGAAAAAAGC-----CAG----AGTTGAAG-GCTGA- 1155
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