Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01826 and BL01317

See Amino acid alignment / Visit BSNT_01826 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence dna-align/BSNT_01826___gerPA.1.5803.seq
#    -bsequence dna-align/BL01317___gerPA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01826___gerPA-BL01317___gerPA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01826___gerPA-BL01317___gerPA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01826___gerPA
# 2: BL01317___gerPA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity:     163/234 (69.7%)
# Similarity:   163/234 (69.7%)
# Gaps:          24/234 (10.3%)
# Score: 586.5
# 
#
#=======================================

BSNT_01826___      1 ATGCCGGCCATTGTCGGAGCGTTTAAAATTAATGCGATTGGTACGAGCGG     50
                     |||||.||.|||||||||||.||||||.|.|||||..|.|||||||||||
BL01317___ger      1 ATGCCAGCTATTGTCGGAGCTTTTAAAGTAAATGCCGTCGGTACGAGCGG     50

BSNT_01826___     51 AGTCGTTCACATCGGGGACTGCATTACGATTTCTCCTCAGGCTCAGGTCA    100
                     .||.|||||..||||.||||||||.||||||||||||.|.||..|.||.|
BL01317___ger     51 CGTTGTTCATGTCGGAGACTGCATCACGATTTCTCCTTATGCAGAAGTTA    100

BSNT_01826___    101 GAACGTTTGCCGGTGCTGGCAGCTTTAATACCGGCGACAGCCTCAAGGTG    150
                     .|||.|||||.|||||.||||||||.||||||||.|||.|.||||..|| 
BL01317___ger    101 AAACATTTGCGGGTGCCGGCAGCTTCAATACCGGAGACGGACTCAGAGT-    149

BSNT_01826___    151 AT------------GAATTATCAAAACACGACGAATGTGTATGACAATGA    188
                     ||            |.||.|.|||.|||           ||||||||.||
BL01317___ger    150 ATACAACCAGAACAGCATCACCAACACA-----------TATGACAACGA    188

BSNT_01826___    189 TGCGGTTGATCAGCCGATCGTGGCCAATGCGTAA    222
                     ||...|.|||||||||.|||..|.|||...|||.
BL01317___ger    189 TGTAATCGATCAGCCGGTCGCAGGCAACCTGTAG    222


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