Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01826 and BL01317
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:20
# Commandline: needle
# -asequence dna-align/BSNT_01826___gerPA.1.5803.seq
# -bsequence dna-align/BL01317___gerPA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01826___gerPA-BL01317___gerPA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01826___gerPA-BL01317___gerPA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01826___gerPA
# 2: BL01317___gerPA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity: 163/234 (69.7%)
# Similarity: 163/234 (69.7%)
# Gaps: 24/234 (10.3%)
# Score: 586.5
#
#
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BSNT_01826___ 1 ATGCCGGCCATTGTCGGAGCGTTTAAAATTAATGCGATTGGTACGAGCGG 50
|||||.||.|||||||||||.||||||.|.|||||..|.|||||||||||
BL01317___ger 1 ATGCCAGCTATTGTCGGAGCTTTTAAAGTAAATGCCGTCGGTACGAGCGG 50
BSNT_01826___ 51 AGTCGTTCACATCGGGGACTGCATTACGATTTCTCCTCAGGCTCAGGTCA 100
.||.|||||..||||.||||||||.||||||||||||.|.||..|.||.|
BL01317___ger 51 CGTTGTTCATGTCGGAGACTGCATCACGATTTCTCCTTATGCAGAAGTTA 100
BSNT_01826___ 101 GAACGTTTGCCGGTGCTGGCAGCTTTAATACCGGCGACAGCCTCAAGGTG 150
.|||.|||||.|||||.||||||||.||||||||.|||.|.||||..||
BL01317___ger 101 AAACATTTGCGGGTGCCGGCAGCTTCAATACCGGAGACGGACTCAGAGT- 149
BSNT_01826___ 151 AT------------GAATTATCAAAACACGACGAATGTGTATGACAATGA 188
|| |.||.|.|||.||| ||||||||.||
BL01317___ger 150 ATACAACCAGAACAGCATCACCAACACA-----------TATGACAACGA 188
BSNT_01826___ 189 TGCGGTTGATCAGCCGATCGTGGCCAATGCGTAA 222
||...|.|||||||||.|||..|.|||...|||.
BL01317___ger 189 TGTAATCGATCAGCCGGTCGCAGGCAACCTGTAG 222
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