Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01859 and BL01310

See Amino acid alignment / Visit BSNT_01859 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_01859___yitI.1.5803.seq
#    -bsequence dna-align/BL01310___yitI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01859___yitI-BL01310___yitI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01859___yitI-BL01310___yitI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01859___yitI
# 2: BL01310___yitI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity:     310/483 (64.2%)
# Similarity:   310/483 (64.2%)
# Gaps:          75/483 (15.5%)
# Score: 936.0
# 
#
#=======================================

BSNT_01859___      1 ATGCTCGAAGTCAAAACCATTTCCGCGGAAGATACGTATGAAATCCGGCA     50
                     |||.|.|||||||||.|.||...||||||||||||||||||.|||.||||
BL01310___yit      1 ATGATTGAAGTCAAACCAATAAACGCGGAAGATACGTATGAGATCAGGCA     50

BSNT_01859___     51 CCGCATTCTGCGTCCCCATCAATCCATTGAACAATGCAAATATGAAGAGG    100
                     |||||||||.||.||..||||..|..|||||..|||.|..||||||...|
BL01310___yit     51 CCGCATTCTCCGGCCGAATCAGCCGCTTGAAGCATGTATGTATGAAACCG    100

BSNT_01859___    101 ATCATGCAAAAGGCT-CCTTTCATCTCGGCGCGTTTTTTGAA----GGAA    145
                     || .|||....||.| |.|||||.|||||.|..|.||    |    ||.|
BL01310___yit    101 AT-TTGCTCGGGGGTGCGTTTCACCTCGGTGGATATT----ACCGGGGCA    145

BSNT_01859___    146 AGCTGATCAGCATCGCCTCTTTTTCC------CCGCAAATTCAGCCATT-    188
                     ||||||||||||||||.||.|||  |      |||.|.||||||...|| 
BL01310___yit    146 AGCTGATCAGCATCGCTTCCTTT--CATAAAGCCGAACATTCAGAGCTTG    193

BSNT_01859___    189 ------AATAACAGAATCCCCAGCATATCGGCTGAGAGGCATGGCAACGC    232
                           ||.|||||           ||||.|||||||||.|||||.||||
BL01310___yit    194 AAGGCGAAGAACAG-----------TATCAGCTGAGAGGGATGGCGACGC    232

BSNT_01859___    233 TTGTAGGATATCGCGATCAAAAAGGCGGG-AGCACGCTGATCAAACACTC    281
                     |||.||||||.||.||.|||||| ||||| ||||||||.|||...||..|
BL01310___yit    233 TTGAAGGATACCGTGAGCAAAAA-GCGGGAAGCACGCTCATCCGCCATGC    281

BSNT_01859___    282 GGAAGAGAAACTGGCGGAGAACGGCGTTCAGGCGG------TCTGGTGCA    325
                     .||||||...|| .||||.||.||     .|||.|      |.|||||||
BL01310___yit    282 CGAAGAGCTTCT-TCGGAAAAAGG-----GGGCAGACCTTTTATGGTGCA    325

BSNT_01859___    326 ATGCCAGAAGCCA--TGTGAAAGGCTACTATTCAAAACTTGGGTGGGAAG    373
                     |||||||  |.||  |||||..|||||||||..|||.||.||.|.....|
BL01310___yit    326 ATGCCAG--GACATCTGTGAGCGGCTACTATGAAAAGCTCGGCTTCAGCG    373

BSNT_01859___    374 AACTCGGCGAACCGTTT--GAGATTCCCGGC--ATAGGCACTCATATTGT    419
                     |||..||||||  ||.|  ||.||.||  ||  ||.||..||||||||.|
BL01310___yit    374 AACAGGGCGAA--GTCTACGACATACC--GCCGATCGGACCTCATATTTT    419

BSNT_01859___    420 CATGTACAAAACACT--AGGAACAAGCAGGTGA    450
                     .|||||.||.|.|.|  .|.||           
BL01310___yit    420 GATGTATAAGAAATTGACGTAA-----------    441


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