Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01859 and BL01310
See
Amino acid alignment /
Visit
BSNT_01859 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:22
# Commandline: needle
# -asequence dna-align/BSNT_01859___yitI.1.5803.seq
# -bsequence dna-align/BL01310___yitI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01859___yitI-BL01310___yitI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01859___yitI-BL01310___yitI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01859___yitI
# 2: BL01310___yitI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 310/483 (64.2%)
# Similarity: 310/483 (64.2%)
# Gaps: 75/483 (15.5%)
# Score: 936.0
#
#
#=======================================
BSNT_01859___ 1 ATGCTCGAAGTCAAAACCATTTCCGCGGAAGATACGTATGAAATCCGGCA 50
|||.|.|||||||||.|.||...||||||||||||||||||.|||.||||
BL01310___yit 1 ATGATTGAAGTCAAACCAATAAACGCGGAAGATACGTATGAGATCAGGCA 50
BSNT_01859___ 51 CCGCATTCTGCGTCCCCATCAATCCATTGAACAATGCAAATATGAAGAGG 100
|||||||||.||.||..||||..|..|||||..|||.|..||||||...|
BL01310___yit 51 CCGCATTCTCCGGCCGAATCAGCCGCTTGAAGCATGTATGTATGAAACCG 100
BSNT_01859___ 101 ATCATGCAAAAGGCT-CCTTTCATCTCGGCGCGTTTTTTGAA----GGAA 145
|| .|||....||.| |.|||||.|||||.|..|.|| | ||.|
BL01310___yit 101 AT-TTGCTCGGGGGTGCGTTTCACCTCGGTGGATATT----ACCGGGGCA 145
BSNT_01859___ 146 AGCTGATCAGCATCGCCTCTTTTTCC------CCGCAAATTCAGCCATT- 188
||||||||||||||||.||.||| | |||.|.||||||...||
BL01310___yit 146 AGCTGATCAGCATCGCTTCCTTT--CATAAAGCCGAACATTCAGAGCTTG 193
BSNT_01859___ 189 ------AATAACAGAATCCCCAGCATATCGGCTGAGAGGCATGGCAACGC 232
||.||||| ||||.|||||||||.|||||.||||
BL01310___yit 194 AAGGCGAAGAACAG-----------TATCAGCTGAGAGGGATGGCGACGC 232
BSNT_01859___ 233 TTGTAGGATATCGCGATCAAAAAGGCGGG-AGCACGCTGATCAAACACTC 281
|||.||||||.||.||.|||||| ||||| ||||||||.|||...||..|
BL01310___yit 233 TTGAAGGATACCGTGAGCAAAAA-GCGGGAAGCACGCTCATCCGCCATGC 281
BSNT_01859___ 282 GGAAGAGAAACTGGCGGAGAACGGCGTTCAGGCGG------TCTGGTGCA 325
.||||||...|| .||||.||.|| .|||.| |.|||||||
BL01310___yit 282 CGAAGAGCTTCT-TCGGAAAAAGG-----GGGCAGACCTTTTATGGTGCA 325
BSNT_01859___ 326 ATGCCAGAAGCCA--TGTGAAAGGCTACTATTCAAAACTTGGGTGGGAAG 373
||||||| |.|| |||||..|||||||||..|||.||.||.|.....|
BL01310___yit 326 ATGCCAG--GACATCTGTGAGCGGCTACTATGAAAAGCTCGGCTTCAGCG 373
BSNT_01859___ 374 AACTCGGCGAACCGTTT--GAGATTCCCGGC--ATAGGCACTCATATTGT 419
|||..|||||| ||.| ||.||.|| || ||.||..||||||||.|
BL01310___yit 374 AACAGGGCGAA--GTCTACGACATACC--GCCGATCGGACCTCATATTTT 419
BSNT_01859___ 420 CATGTACAAAACACT--AGGAACAAGCAGGTGA 450
.|||||.||.|.|.| .|.||
BL01310___yit 420 GATGTATAAGAAATTGACGTAA----------- 441
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.