Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03131 and BL01304
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_03131___yocI.1.5803.seq
# -bsequence dna-align/BL01304.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03131___yocI-BL01304.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03131___yocI-BL01304.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03131___yocI
# 2: BL01304
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1894
# Identity: 1259/1894 (66.5%)
# Similarity: 1259/1894 (66.5%)
# Gaps: 230/1894 (12.1%)
# Score: 3980.5
#
#
#=======================================
BSNT_03131___ 1 ATGTTACATAGAGCCCAATCCCTTCTGGCTCATTATTTTGGTTATGAGAA 50
|||.||.|.|.||||.||.|.||..||...||.||||||||.|||
BL01304 1 ATGCTAGAGAAAGCCGAAGCACTATTGCAGCACTATTTTGGCTAT----- 45
BSNT_03131___ 51 GTTTCGGAGCGGCC-------AAGATGAAGCGATCCGCT---TGGTGACG 90
..|||...|||.|| |||| ||||.||.|..| |.||..|.
BL01304 46 CCTTCACTGCGCCCGGGGCAGAAGA--AAGCCATTCAATCTGTCGTTTCT 93
BSNT_03131___ 91 G--AAGCGAGGCAAAATACGGCCTGCATTATGCCGACGGGAGGCGGCAAA 138
| ||||||| ||||.||.|||||||||||||||||.||.||||||
BL01304 94 GAAAAGCGAG-----ATACAGCATGCATTATGCCGACGGGCGGAGGCAAA 138
BSNT_03131___ 139 TCGATTTGCTATCAAATTCCGG----CATTAATGTTTGAAGGGACGACGA 184
||.||.|||||.||||||||.| |.||| |.||||||||.||.|
BL01304 139 TCAATCTGCTACCAAATTCCCGCGCTCCTTA----TGGAAGGGACAACCA 184
BSNT_03131___ 185 TCGTCATATCACCGTTGATTTCCTTGATGAAGGATCAAGTTGATGCGTTA 234
|.||.||.||.||.||.|||||||||||||||||.||.||.|||||.|||
BL01304 185 TTGTGATCTCTCCTTTAATTTCCTTGATGAAGGACCAGGTGGATGCTTTA 234
BSNT_03131___ 235 GAAGAAGC-GGGGATTAACGCCGCCTACATTAACAGCACACAATCCAATC 283
||..||| .||.|||.|.||.||.|||.|.|||||..|...|..|.||.
BL01304 235 -AATCAGCTTGGAATTCAAGCTGCGTACGTGAACAGTTCTTTAGGCCATA 283
BSNT_03131___ 284 AGGAAATATATGAGAGGCTGAACGGACTCAAAGAAGG-GGCTTATAAGCT 332
|.|||||...||||.||||...||.|.|.||.||||| ||| ||.|||||
BL01304 284 ACGAAATCGCTGAGCGGCTCTCCGTATTTAAGGAAGGCGGC-TACAAGCT 332
BSNT_03131___ 333 TTTTTACATTACACCAGAGCGACTAACGTCCACAGAGTTTATCCG---GA 379
.|||||..|.|||||.|||||.||.|||||..|.||.||.||.|| ||
BL01304 333 CTTTTATGTAACACCTGAGCGGCTGACGTCTCCCGAATTCATTCGCGCGA 382
BSNT_03131___ 380 TTTTGCAGGGCATAGATGTTCCTTTGGTCGCAATAGACGAGGCGCACTGT 429
|||..|| |||..||.||||..||||.||.||.||.||.||.||.||.
BL01304 383 TTTCCCA---CATTCATATTCCGCTGGTAGCCATTGATGAAGCTCATTGC 429
BSNT_03131___ 430 ATTTCTCAATGGGGCCATGATTTCAGGCCAAGCTACAGGAATATTGAAAT 479
|||||.||.|||||.||||||||||||||.||||||||..||||||||..
BL01304 430 ATTTCACAGTGGGGACATGATTTCAGGCCGAGCTACAGACATATTGAAGG 479
BSNT_03131___ 480 CTTGTTCCGTGAATTA--CACGACA---AGCCTGTTATCATGGCGTTAAC 524
|||.|| ||.|| |.||.|| ..||.|||.|..|||||||.||
BL01304 480 CTTTTT-----AAATAGCCTCGGCACCCGCCCGGTTGTATTGGCGTTGAC 524
BSNT_03131___ 525 AGCAACAGCCACACCCGAGGTTCATGATGATATTTGCAAACAGCTGCATA 574
.||.||.||.||.||||||||||||||.||||||||||.||||||....|
BL01304 525 GGCTACCGCAACGCCCGAGGTTCATGAGGATATTTGCACACAGCTCGGGA 574
BSNT_03131___ 575 TTCAAAAAGAAAACACGGTATATACAGGATTTTCACGAGAGAATTTAACC 624
|..|||||||.||||||||.|.|||.||.||||||||.||.|||||.||.
BL01304 575 TCGAAAAAGAGAACACGGTTTTTACCGGTTTTTCACGGGATAATTTGACG 624
BSNT_03131___ 625 TTTAAAGTAGTAAAAGGAGAAAATAAAGATCGGTTTATAGACGAATATGT 674
||||||.|..|||||||.|||||.|..||.||.|||||.||...||||||
BL01304 625 TTTAAAATTTTAAAAGGCGAAAACAGGGACCGTTTTATCGAATCATATGT 674
BSNT_03131___ 675 GCAAAACAACAG-GCATGAAGCAGGAATTGTCTATACAGCGACCAGAAAA 723
|.|.||.|||.| .|| ||.||.||||||.|||||||||||||.|||||.
BL01304 675 GGAGAAAAACCGCTCA-GAGGCGGGAATTATCTATACAGCGACAAGAAAG 723
BSNT_03131___ 724 GAAGCTGATCGGATATATGAGAGATTGAAACGAA-ATCAAGTC------- 765
|||||.| ||.||| ||||||.|
BL01304 724 GAAGCCG---------------------AAAGAATATCAAGCCGCCTCTC 752
BSNT_03131___ 766 ------AGG----GCAGGCCGG----TATCATGGAGGTATGGCTGATGAT 801
||| || |||||| |||||.||.||.||||.||||||
BL01304 753 TCAAAAAGGAATTGC-GGCCGGGTGCTATCACGGCGGGATGGATGATGA- 800
BSNT_03131___ 802 GAGAGAAA-AGA---GCAGCAGGAAAGGTTTCTT----AATGATGAGCTT 843
||||| ||| ||||||||| |.|||| |||||||||.|
BL01304 801 ---AGAAAGAGACCGGCAGCAGGA----TCTCTTTTTAAATGATGAGAT- 842
BSNT_03131___ 844 CAAGTG--ATGGTGGCAACCTCTGCTTTTGGAATGGGTATTGATAAATCA 891
.|||| |||...||.|||||.||.|||||||||||.||.||||||||.
BL01304 843 -CAGTGTAATGACAGCGACCTCGGCGTTTGGAATGGGCATCGATAAATCC 891
BSNT_03131___ 892 AATATCAGATTTGTTCTGCATGCACAAATCCCGAAAGATATGGAAAGCTA 941
||||||.|.|.|||..|.|||||.|||||.||.|||.|||||||.|||||
BL01304 892 AATATCCGCTATGTGATTCATGCCCAAATTCCAAAAAATATGGAGAGCTA 941
BSNT_03131___ 942 TTATCAAGAGGCAGGACGAGCTGGACGGGACGGTCTTGCCAGTGAATGTG 991
.||.||.|||||.||||||||.|||||.|||||.||||.|||.||.||..
BL01304 942 CTACCAGGAGGCGGGACGAGCCGGACGCGACGGCCTTGACAGCGAGTGCA 991
BSNT_03131___ 992 TTCTCCTGTTTTCACCGCAGGATATTATGGTGCAGCGTTTCTTAATTGAG 1041
|.||.||||||||.||.|||||.|||..|.|.|||||.||.|||||.||.
BL01304 992 TCCTGCTGTTTTCCCCTCAGGACATTCGGCTTCAGCGGTTTTTAATCGAA 1041
BSNT_03131___ 1042 CAAT---CAGAACATGAAGAGAAACAAAAGCAGGATTTAAAAAAGCTGAG 1088
||.| |||||.|||||||.|..|....|||.||..|.|||||.|||||
BL01304 1042 CAGTCGACAGAAGATGAAGACATTCGGGCGCAAGACGTGAAAAAACTGAG 1091
BSNT_03131___ 1089 ACAAATGGTCGACTACTGTCATACGGAAGATTGTCTGCAGCGTTTTATCC 1138
.||||||||.||.|..||.||||||||||..|||||..|.||.|||||.|
BL01304 1092 GCAAATGGTTGATTTTTGCCATACGGAAGGCTGTCTCGAACGGTTTATTC 1141
BSNT_03131___ 1139 TTATGTATTTCGGAGAA-----AAGGAGCCTAATGCGTGCGGACA-GTGC 1182
||...|||||.||.||| || ||.|| |..||||| || ||||
BL01304 1142 TTTCTTATTTTGGCGAAGTTCCAA----CCGAA-GACTGCGG-CAGGTGC 1185
BSNT_03131___ 1183 GGAAACTGTACCGATAC---AAGAGCGGCCCAT----GACGTGACGCGGG 1225
||.|.||||..|||.|| ||| ||| ||.||||||..||
BL01304 1186 GGCAGCTGTCTCGACACCCGAAG-------CATCACCGATGTGACGAAGG 1228
BSNT_03131___ 1226 AGGCGCAAATGGTCTTATCTTGTATCATTCGCATGAAAGAACGGTTTGGC 1275
||||.||.|||||..|.||.||.|||||.||||||..||||.||||.||.
BL01304 1229 AGGCACAGATGGTGCTGTCCTGCATCATCCGCATGGGAGAAAGGTTCGGA 1278
BSNT_03131___ 1276 AAGACGATGGTTGCCCAGGTGCTTGCCGGCTCCAAAAATAAAAAAGTTCT 1325
||.||.|||||.||.||.||.||.||.||.||.||||||||.|||||...
BL01304 1279 AAAACCATGGTGGCGCAAGTTCTGGCAGGTTCGAAAAATAAGAAAGTGAC 1328
BSNT_03131___ 1326 TGAAAACGGCTTTTCAG-ACCTCTCAACATACGGGATATTAAAACACCAA 1374
.||||||||| ||.||| |..|.||.||.|||||.||.|||||..|.|..
BL01304 1329 CGAAAACGGC-TTCCAGCAATTATCGACTTACGGAATTTTAAAGAAACGG 1377
BSNT_03131___ 1375 TCCGTTGGCGAAATCAGCGATTTTATCGAATTTCTTATTTCTGACGACTT 1424
||..|||.|||.||.|||||||||||.||.|||.|.||..|.||.||.|.
BL01304 1378 TCTATTGCCGACATAAGCGATTTTATAGAGTTTTTAATCGCAGATGAGTA 1427
BSNT_03131___ 1425 CATCAGGATGTCAGACGGAACGTTTCCGACTCTTTTTGTCAGTAGTAAAG 1474
|||||..|||||.|||||.||.|.|||...|||.||||||...|..||.|
BL01304 1428 CATCAAAATGTCCGACGGGACATATCCTGTTCTCTTTGTCGCCAACAAGG 1477
BSNT_03131___ 1475 GAAGGAA---TGTGCT------GAAAGGAGAATTATCAGTAGCG---AGA 1512
|..|.|| |.|||| |.|||..| |.|| ||| |||
BL01304 1478 GGCGAAACGTTTTGCTCGGCCGGGAAGCGG--TGAT-----GCGCAAAGA 1520
BSNT_03131___ 1513 AAAGAAGC-----GTTAAAAGCGGCAGCGATTACTGAAAATGACGAGCTA 1557
|||.|.|| ..|.|||.|| ||| ||.|||||||..|.
BL01304 1521 AAAAATGCAAACAAATCAAATCG-------TTA---AAGATGACGAATTG 1560
BSNT_03131___ 1558 TTTGAACGAT---------TGCGCATGGTTCGGAAAGAAATTGCGGCTGA 1598
||||||||.| |||||| ||||| .||||....||
BL01304 1561 TTTGAACGGTTAAGGGCGCTGCGCA-------GAAAG--CTTGCTCAGGA 1601
BSNT_03131___ 1599 TCAGGGTGTTCCGCCATTTGTTGTTTTCTCTGACCAAACGTTAAAAGAAA 1648
.||.||.||.||.||.||||||||.|||||||||.|||||.|....||||
BL01304 1602 ACAAGGCGTGCCTCCTTTTGTTGTATTCTCTGACGAAACGCTGCGGGAAA 1651
BSNT_03131___ 1649 TG-TCAGGAAA---------ACAGCCCGTAAATGATGATGAACTTTTGTC 1688
|| .|.||||| ||| ||.||.||.||||||||
BL01304 1652 TGAGCGGGAAAGTCCCTCTGACA----------GACGAAGAGCTTTTGTC 1691
BSNT_03131___ 1689 TATAAAAGGAGTCGGAGAACAAAAAAGAGCAAAATACGGCCGGC--TTTT 1736
..|.||||||||.||||||||||||||||.||||||||| .|| |.||
BL01304 1692 AGTCAAAGGAGTGGGAGAACAAAAAAGAGTAAAATACGG--AGCTGTATT 1739
BSNT_03131___ 1737 TTTACAAGAAATACAAGCTTATGCA----AGGATGACAGACTAA 1776
|.||||.||..|.|||||.|||..| ||.|.|| ||..|||
BL01304 1740 TCTACAGGAGCTTCAAGCCTATAAAACTGAGAAAGA-AGCATAA 1782
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