Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01065 and BL01296
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence dna-align/BSNT_01065___ydjI.1.5803.seq
# -bsequence dna-align/BL01296___ydjI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01065___ydjI-BL01296___ydjI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01065___ydjI-BL01296___ydjI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01065___ydjI
# 2: BL01296___ydjI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 997
# Identity: 786/997 (78.8%)
# Similarity: 786/997 (78.8%)
# Gaps: 47/997 ( 4.7%)
# Score: 3098.5
#
#
#=======================================
BSNT_01065___ 1 ATGTCGTTTTTCAGAAATCAATTAGCGAATGTAGTAGAGTGGGAAGAATT 50
|||..||||||.|||||||||||.||.|||||||||||||||||.|||||
BL01296___ydj 1 ATGGTGTTTTTTAGAAATCAATTTGCAAATGTAGTAGAGTGGGATGAATT 50
BSNT_01065___ 51 TAGAGATGATATGATTTTTTATAAATGGAACAATCGTGAAATCAAAAAAG 100
|.|.||||||||||||||.||||||||||||||.||.|||||||||||.|
BL01296___ydj 51 TCGCGATGATATGATTTTCTATAAATGGAACAACCGCGAAATCAAAAAGG 100
BSNT_01065___ 101 GGAGCCGTTTAATCATTCGTCCCGGACAGGATGCTGTCTTTTTGAACAAT 150
|||||||..|.||||||||.|||||.||||||||.||||||||.|||||
BL01296___ydj 101 GGAGCCGGCTGATCATTCGCCCCGGTCAGGATGCCGTCTTTTTAAACAA- 149
BSNT_01065___ 151 GGGCGG----GTTGAAGGAGTCTTTCAAGATGATGGCGATTATGATATTG 196
||| .|||||||..|.||.||.|||||.|||||.||||||||||
BL01296___ydj 150 ---CGGAAAAATTGAAGGCATTTTCCAGGATGAGGGCGACTATGATATTG 196
BSNT_01065___ 197 AATCAGAAATTATTCCATTCCTTTCAACGTTAAAGGGCTTTAAGTTTGGC 246
||||.|||||||||||.||..|.||.||.|||||.||.|||||.||||||
BL01296___ydj 197 AATCCGAAATTATTCCTTTTTTATCCACTTTAAAAGGTTTTAAATTTGGC 246
BSNT_01065___ 247 TTTAACAGCGGCATGCGAGCTGAGGTGCTGTTTGTCAATACGAAGGAATT 296
|||||||||||.|||||.||.||.||.|||||||||||.|||||||||||
BL01296___ydj 247 TTTAACAGCGGGATGCGCGCCGAAGTCCTGTTTGTCAACACGAAGGAATT 296
BSNT_01065___ 297 TACCGT-AAGATGGGGAACAAAACAGGCGATAAATATTCCGGCAGCGGGA 345
|||||| ||| |||||.||.||..|.||.||.|||||.|||||.||.|||
BL01296___ydj 297 TACCGTCAAG-TGGGGGACGAAGAATGCCATCAATATCCCGGCTGCAGGA 345
BSNT_01065___ 346 ATGCCAGGCGGGATGCCCATTCGCGCAAACGGCACATTTAATTTCAAGGT 395
.|.||.|||||.|||||.||..|.||.|||||.|.||||||.||.|||||
BL01296___ydj 346 CTTCCGGGCGGCATGCCGATCAGGGCGAACGGAAGATTTAACTTTAAGGT 395
BSNT_01065___ 396 GCAGGACTATATCAGC-CTGATTGATAAAATCGCTGGCGTGAAAGATCAA 444
|.|.||.|||.|| || .|.||.||||||||.||.||.|||||||||||.
BL01296___ydj 396 GAATGATTATGTC-GCATTAATCGATAAAATTGCCGGTGTGAAAGATCAG 444
BSNT_01065___ 445 TATTTTGTAGAGGATATTAAAACCCGTATCATTTCTATTCTGGATCAGCT 494
|||.||||.||.|||||.||||..||.||||..||.|||||.||||||||
BL01296___ydj 445 TATGTTGTGGAAGATATCAAAATACGGATCACATCCATTCTCGATCAGCT 494
BSNT_01065___ 495 TCTCATGAAGTGGATCACAAGAGAAGGGAAAGATATGTTTAATCTTCAAG 544
|||.||||||||||||||||.||||||.|||||||||||.||.|||||||
BL01296___ydj 495 TCTGATGAAGTGGATCACAAAAGAAGGAAAAGATATGTTCAACCTTCAAG 544
BSNT_01065___ 545 CAAACGCTTTTGATATTGCCAAGGGAATTCAAG--AGGACTTAGATATG- 591
|.|||||.||||||||.||.||||||| ||||| ||..||| ||||||
BL01296___ydj 545 CCAACGCCTTTGATATCGCAAAGGGAA-TCAAGGAAGATCTT-GATATGG 592
BSNT_01065___ 592 -------CGCTTAATAAGCGACGGGATGACAGTCACTGGTTTTCAAATCA 634
|| |||||||.|||||..|.||.||.|||.|.||||
BL01296___ydj 593 AGATTGTCG--------GCGACGGCATGACGATAACAGGCTTTAACATCA 634
BSNT_01065___ 635 TGAGCTTTAATTATCCTCAAGAGGTTCAAGAAATGATTACAAAGAACGCT 684
||||.||.||||||||..||||.||.||.||.|||||.||.||.||||||
BL01296___ydj 635 TGAGTTTCAATTATCCGAAAGAAGTCCAGGACATGATCACGAAAAACGCT 684
BSNT_01065___ 685 TCCTACGGTATGGTTGGGGATGTGAACAGATACCAGCAAATATCAATGAC 734
|||.||||.|||||.||.|||.||||||||||.|||||.||.||||||||
BL01296___ydj 685 TCCCACGGCATGGTCGGCGATCTGAACAGATATCAGCAGATTTCAATGAC 734
BSNT_01065___ 735 GGATGGAATGGCATCCGGAAAGATGAGCGGAGGCGGAGCGGCTTCGGATA 784
.||.||.|||||.||.||||||||||..||.|||||.||.||.||.||.|
BL01296___ydj 735 AGACGGCATGGCTTCAGGAAAGATGACAGGCGGCGGTGCCGCATCTGACA 784
BSNT_01065___ 785 TGGCTGGAATGATGATGGGAATGAATATGGCCAATCAGATGATGAACCAA 834
||||.||.|||||||||||.|||||..||||.||.||.||||||||.||.
BL01296___ydj 785 TGGCCGGCATGATGATGGGGATGAACGTGGCGAACCAAATGATGAATCAG 834
BSNT_01065___ 835 ATGAATCAAAATCAGCAGGCACAGTCATCAGGC-CCACAGTCAA------ 877
|||||.||||||||||||||.||..|| |||.| |||| |||
BL01296___ydj 835 ATGAACCAAAATCAGCAGGCGCAAACA-CAGACGCCAC---CAAGCGCGC 880
BSNT_01065___ 878 --CTGGCAGCGGAAGCAAACCGAATTTCTGTCCAAACTGCGGAACAAAAA 925
|.|.||||||.| ||||||||.||||||||||||||||||||.||||
BL01296___ydj 881 CGCAGCCAGCGGCA--AAACCGAACTTCTGTCCAAACTGCGGAACGAAAA 928
BSNT_01065___ 926 CGGGCGAAGCCAATTTTTGTCCGAATTGCGGCCAGAAGCTTGTATAA 972
||||||||||||||||.||||||||.|||||.||||||||.||.|||
BL01296___ydj 929 CGGGCGAAGCCAATTTCTGTCCGAACTGCGGTCAGAAGCTAGTGTAA 975
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