Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03927 and BL01292

See Amino acid alignment / Visit BSNT_03927 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_03927___yrhO.1.5803.seq
#    -bsequence dna-align/BL01292___yrhO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03927___yrhO-BL01292___yrhO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03927___yrhO-BL01292___yrhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03927___yrhO
# 2: BL01292___yrhO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 829
# Identity:     656/829 (79.1%)
# Similarity:   656/829 (79.1%)
# Gaps:           2/829 ( 0.2%)
# Score: 2576.0
# 
#
#=======================================

BSNT_03927___      1 ATGAAAGAAAATATGTTAGACATTTTAAAAAACCTCAATTTTACAGAATA     50
                     |||||.|||||.||.||||||.|..|.||||||||.|||||.||.||.||
BL01292___yrh      1 ATGAAGGAAAACATATTAGACGTACTGAAAAACCTGAATTTCACCGAGTA     50

BSNT_03927___     51 TGAATCGAAAGCGTATTTGGCATTATTGCAAGAATCACCTTTAACAGGCT    100
                     ||||||||||||.||.|||||..|.|||.|||||||.||..|.|||||||
BL01292___yrh     51 TGAATCGAAAGCATACTTGGCGCTCTTGGAAGAATCGCCGCTGACAGGCT    100

BSNT_03927___    101 ATGCCGTTGCCAAAAAATCCGGAGTTCCCCGTTCTAAAATTTATGAAGTC    150
                     ||||.||.||.||||||||.||.||||||||.||.|||||.||.|||||.
BL01292___yrh    101 ATGCGGTGGCAAAAAAATCGGGTGTTCCCCGGTCGAAAATATACGAAGTG    150

BSNT_03927___    151 TTGGAAAGCCTTGTGTTAAGGGGAGATGTTTTTGTCAGTCATGGAAATAC    200
                     .||||.||||||||..|..|.||.|||.|.||||||||..|.||.||.||
BL01292___yrh    151 CTGGAGAGCCTTGTAATCCGCGGCGATATATTTGTCAGCTACGGCAACAC    200

BSNT_03927___    201 GCCTCAGTATGTTCCTGTCCCCGCAAAAGAACTGATTAAAAACCGCCGGC    250
                     .||.|||||..||||.||.|||||.||.||.||||||||||||||.|||.
BL01292___yrh    201 ACCGCAGTACATTCCCGTTCCCGCCAAGGACCTGATTAAAAACCGGCGGA    250

BSNT_03927___    251 TCAAAGCGGAAGAGCATTTTGATCAGGCTGAGAAATATTTTGAAAAGTTC    300
                     |.||||||||||||..||||||.|||||.||.||||||||.||.|||||.
BL01292___yrh    251 TGAAAGCGGAAGAGACTTTTGAACAGGCAGAAAAATATTTCGAGAAGTTT    300

BSNT_03927___    301 GAGCAGACTGCTAATGACCGGGAAAACATCTGGAATATCACCGGCCGCAG    350
                     ||||..|||||.||||||||||||||.||.|||||.||||||||.||.||
BL01292___yrh    301 GAGCGCACTGCAAATGACCGGGAAAATATTTGGAACATCACCGGGCGAAG    350

BSNT_03927___    351 TGAAATTCTTGAAAAGGTGAAGGCTTGTATTTTATCTGCCAAAAAAAGAA    400
                     .||.|||||.||.||.||.|||||.||.||.|.|||.|||..||||||.|
BL01292___yrh    351 CGAGATTCTCGATAAAGTAAAGGCGTGCATATCATCGGCCGGAAAAAGGA    400

BSNT_03927___    401 TCCTCTTAGAAATATGGAAAGAGGATTTTGAGGAGATAGAAG-CAGAGCT    449
                     |.|||.|.|||||.|||||||||||||||...|| ||.|.|| |.|||||
BL01292___yrh    401 TTCTCCTGGAAATTTGGAAAGAGGATTTTCCTGA-ATTGGAGCCTGAGCT    449

BSNT_03927___    450 CAAACAGGCGGCAGAACAAGGCGTTATTGTCACCATTATTGCGTACGGAG    499
                     |||.|.|||.|||.||.|||||||.|||||.|||||||||||.|||||.|
BL01292___yrh    450 CAAGCGGGCCGCAAAAAAAGGCGTCATTGTGACCATTATTGCATACGGCG    499

BSNT_03927___    500 ACATCGTATCTGATTTTGCCAATGTTTACCTTCATGATATGAGCAGTGAA    549
                     ||||.|.|.|.|||||.||||||||.||.||.|||||.|..|||||..||
BL01292___yrh    500 ACATTGAAGCGGATTTCGCCAATGTCTATCTACATGACAACAGCAGGCAA    549

BSNT_03927___    550 ATTACAGAAGAGTATGACGGACGGTGGCTTGTCTATAGCGGAGATGATTC    599
                     |||||||||||||||||||||||.|||||.||.|..||||..||.|||||
BL01292___yrh    550 ATTACAGAAGAGTATGACGGACGCTGGCTCGTATTCAGCGTCGACGATTC    599

BSNT_03927___    600 AGAAGTCGTAGCGGGCATTGTCTCACTTGGCAACGACAGCCGTGCTGCAT    649
                     ||||||.||.||.|||||||||||.|.|||.||.||||||||.||.||.|
BL01292___yrh    600 AGAAGTTGTGGCCGGCATTGTCTCGCATGGGAAAGACAGCCGCGCAGCCT    649

BSNT_03927___    650 GGACGATGCATGTAGGTTTAGTCATGCCTATTACTGAAGTGATCATTCAT    699
                     ||||||||||||||||.||.||.|||||.|||||.||||||||.||||||
BL01292___yrh    650 GGACGATGCATGTAGGCTTGGTGATGCCGATTACCGAAGTGATGATTCAT    699

BSNT_03927___    700 GATCTGTACCTCATGGAAATTCTGAAAAAGCATAGAGAGCTTTTAGAAGA    749
                     |||.|||||||.||||||||..||.|.|||||.||||||.|.||.||.||
BL01292___yrh    700 GATTTGTACCTGATGGAAATCATGGAGAAGCACAGAGAGGTATTGGAGGA    749

BSNT_03927___    750 GAGCTTCGGGAAAAATCTCATCCAGTTGCGCCGTAAATTTTCTATCCATT    799
                     .||.|||||..||||.||.|||||.||||||||.||||||||.||.|||.
BL01292___yrh    750 AAGTTTCGGCGAAAACCTGATCCATTTGCGCCGCAAATTTTCGATACATC    799

BSNT_03927___    800 CAGATTTCAAAAAACATTATTTGGAATAA    828
                     |.|||||.|||||.||||||.||.|||||
BL01292___yrh    800 CGGATTTTAAAAAGCATTATATGAAATAA    828


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