Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02628 and BL01285
See
Amino acid alignment /
Visit
BSNT_02628 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_02628___sucC.1.5803.seq
# -bsequence dna-align/BL01285___sucC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02628___sucC-BL01285___sucC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02628___sucC-BL01285___sucC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02628___sucC
# 2: BL01285___sucC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1169
# Identity: 963/1169 (82.4%)
# Similarity: 963/1169 (82.4%)
# Gaps: 19/1169 ( 1.6%)
# Score: 4019.5
#
#
#=======================================
BSNT_02628___ 1 ATGAATATCCATGAGTACCAGGGAAAAGAAGTCCTCAGAAAATATGGGGT 50
||||||||||||||||||||.||.||||||||.|||||||||||.||.||
BL01285___suc 1 ATGAATATCCATGAGTACCAAGGGAAAGAAGTACTCAGAAAATACGGAGT 50
BSNT_02628___ 51 ATCTGTTCCTGAAGGTAAAGTGGCTTTTACAGCAGAAGAAGCAGTTGAGA 100
..|||||||.||||||||||||||.|||||||||||.|||||.||
BL01285___suc 51 GGCTGTTCCGGAAGGTAAAGTGGCATTTACAGCAGATGAAGCGGT----- 95
BSNT_02628___ 101 GTGCAAAG-------AGC-TTATCCAGCTCGGTTTATGTCGTAAAGGCTC 142
||||| ||| .|.||||||||||||||||||||.||.||||
BL01285___suc 96 ---CAAAGCAGCGGAAGCGCTGTCCAGCTCGGTTTATGTCGTGAAAGCTC 142
BSNT_02628___ 143 AAATTCATGCTGGCGGTCGAGGCAAAGCTGGTGGGGTAAAAATAGCAAAA 192
|||||||.||.|||||.||.||.||||||||.|||||.|||||.||||||
BL01285___suc 143 AAATTCACGCCGGCGGACGCGGTAAAGCTGGCGGGGTTAAAATTGCAAAA 192
BSNT_02628___ 193 TCATTAGACGAAGTAAAAGCGTATGCCGAAGAACTATTAGGGAAGACCCT 242
|||..|||.|||||.|||||.|||||.||||||.|.||.||.|||||.||
BL01285___suc 193 TCAAAAGAAGAAGTCAAAGCCTATGCGGAAGAATTGTTGGGAAAGACGCT 242
BSNT_02628___ 243 AGTTACACATCAGACGGGTCCGGACGGCCAAGTAATAAAACGCTTACTTA 292
.||.||.||.|||||||||||.|||||||||..|||||||||||||||||
BL01285___suc 243 TGTCACTCACCAGACGGGTCCCGACGGCCAACAAATAAAACGCTTACTTA 292
BSNT_02628___ 293 TTGAAGAAGGCTGCGATATTAAAAAAGAATATTACATCGGTCTAGTGCTT 342
|||||||||||||||||||.|||||||||||.||..||||.|||||.||.
BL01285___suc 293 TTGAAGAAGGCTGCGATATCAAAAAAGAATACTATGTCGGCCTAGTTCTC 342
BSNT_02628___ 343 GACCGCGCCACTTCAAGAATCGTTTTGATGGCTTCTGAAGAAGGCGGAAC 392
|||.|.||.||||||.|.|||||..|||||||.||||||||||||||.||
BL01285___suc 343 GACAGGGCGACTTCACGCATCGTGCTGATGGCCTCTGAAGAAGGCGGCAC 392
BSNT_02628___ 393 GGAAATTGAAGAAGTTGCGGAGAAAACACCGGAAAAAATCAAAAAAGCTG 442
|||||||||||||||.||.||.||||||||||||||||||...||||..|
BL01285___suc 393 GGAAATTGAAGAAGTCGCTGAAAAAACACCGGAAAAAATCGTCAAAGAAG 442
BSNT_02628___ 443 TCATTGATCCAGCTGTTGGCCTTCAAGGCTATCAAGCCAGAGAAATTGCA 492
|.||.|||||.|||||.||.||.||..||||.||.||.|||.||||.||.
BL01285___suc 443 TGATCGATCCGGCTGTCGGACTGCAGAGCTACCAGGCGAGAAAAATCGCC 492
BSNT_02628___ 493 TTCGCTATTAATATTCCAAAAGAGCTCGTGGGAAAAGCTGCTAAATTTAT 542
|||||.||.||||||||.||||||||.||.||..|.||.|.|||.|||||
BL01285___suc 493 TTCGCCATCAATATTCCGAAAGAGCTTGTCGGCCAGGCCGTTAAGTTTAT 542
BSNT_02628___ 543 GCTTGGACTATATAAAGCGTTTGTTGAGAAAGACTGCTCAATCGCCGAAA 592
|.|.||.||.||.||.||||||..|||.||||||||.||.||.||.||||
BL01285___suc 543 GATGGGGCTGTACAAGGCGTTTACTGAAAAAGACTGTTCCATTGCTGAAA 592
BSNT_02628___ 593 TCAATCCGCTTGTTGTTACCGGCGACGGAAATGTGATGGCGCTTGATGCA 642
||||||||||.||.||.||.||.||||||||.||.|||||.|||||.||.
BL01285___suc 593 TCAATCCGCTCGTCGTCACAGGGGACGGAAAAGTCATGGCCCTTGACGCC 642
BSNT_02628___ 643 AAATTGAATTTTGACAGCAATGCGTTGTACCGACAAAAGGACATTATGGA 692
||..||||.|||||||||||||||.|.|||.|||||||.|||||..||||
BL01285___suc 643 AAGCTGAACTTTGACAGCAATGCGCTATACAGACAAAAAGACATCTTGGA 692
BSNT_02628___ 693 ATACAGAGATTTGGATGAAGAAGATCCGAAAGAAATTGAAGCGTCCAAAT 742
.|||||||||.|.|||||||||||||||||.|||||.|||||.|||||.|
BL01285___suc 693 GTACAGAGATCTCGATGAAGAAGATCCGAAGGAAATCGAAGCATCCAAGT 742
BSNT_02628___ 743 ATGATCTAAGCTACATTTCCCTTGATGGAAATATCGGCTGTATGGTAAAC 792
|||||.|||||||.|||||.||.||||||||.||||||||.|||||.|||
BL01285___suc 743 ATGATTTAAGCTATATTTCGCTCGATGGAAACATCGGCTGCATGGTCAAC 792
BSNT_02628___ 793 GGCGCGGGGCTTGCAATGTCCACGATGGATATTATCAAGCATTATGGAGG 842
||.|||||||||||.|||||.||.|||||.|||||||||||.||.|||||
BL01285___suc 793 GGAGCGGGGCTTGCGATGTCGACCATGGACATTATCAAGCACTACGGAGG 842
BSNT_02628___ 843 AGAACCGGCCAACTTCCTTGATGTGGGCGGCGGTGCAACCGCTGAAAAAG 892
.||||||||||||||||||||.||.||.|||||.||.||.||.|||||.|
BL01285___suc 843 GGAACCGGCCAACTTCCTTGACGTTGGAGGCGGCGCGACAGCCGAAAAGG 892
BSNT_02628___ 893 TCACGGAAGCATTTAAAATCATTCTTTCTGATCAAAACGTTAAAGGGATT 942
|.||||||||.||.||.||||||.|.||||||||||||||.||||||||.
BL01285___suc 893 TAACGGAAGCGTTCAAGATCATTTTGTCTGATCAAAACGTCAAAGGGATC 942
BSNT_02628___ 943 TTTGTCAACATTTTCGGCGGCATTATGAAATGTGATGTCATCGCAGAAGG 992
||||||||.||||||||||||||.||||||||.||.|||||.||||||||
BL01285___suc 943 TTTGTCAATATTTTCGGCGGCATCATGAAATGCGACGTCATTGCAGAAGG 992
BSNT_02628___ 993 GGTTGTTGAAGCGACTAGACAAGTTGGTTTGACATTGCCGCTTGTCGTCC 1042
.||||||||||||||.|.||||||.|||.|||||||||||||||||||.|
BL01285___suc 993 CGTTGTTGAAGCGACAAAACAAGTCGGTCTGACATTGCCGCTTGTCGTTC 1042
BSNT_02628___ 1043 GTCTTGAAGGCACAAACGTGGATCTAGGGAAGAAAATCCTTAGTGAATCA 1092
|.|||||||||||.||.||.|||||.||.|||||.|||||...|||.|||
BL01285___suc 1043 GCCTTGAAGGCACCAATGTCGATCTCGGCAAGAAGATCCTCGATGATTCA 1092
BSNT_02628___ 1093 GGATTAAACATTACATCTGCGGAATCAATGGCTGACGGCGCGCAGAAAAT 1142
|||.|.||.|||||.|||||||||||||||||||||||||||||||||||
BL01285___suc 1093 GGACTCAATATTACGTCTGCGGAATCAATGGCTGACGGCGCGCAGAAAAT 1142
BSNT_02628___ 1143 CGTATCCTTAGT---TTAA 1158
|||||||||||| .|||
BL01285___suc 1143 CGTATCCTTAGTGAAGTAA 1161
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.