Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02631 and BL01281
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_02631___topA.1.5803.seq
# -bsequence dna-align/BL01281___topA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02631___topA-BL01281___topA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02631___topA-BL01281___topA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02631___topA
# 2: BL01281___topA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2091
# Identity: 1641/2091 (78.5%)
# Similarity: 1641/2091 (78.5%)
# Gaps: 30/2091 ( 1.4%)
# Score: 6358.0
#
#
#=======================================
BSNT_02631___ 1 ATGTCTGATTATCTAGTCATCGTGGAATCGCCCGCTAAGGCGAAAACGAT 50
|||||.||.||..|||||||||||||||||||.||.|||||.||||||||
BL01281___top 1 ATGTCCGAATACTTAGTCATCGTGGAATCGCCTGCAAAGGCAAAAACGAT 50
BSNT_02631___ 51 TGAACGTTACTTAGGTAAAAAATATAAAGTAAAAGCATCAATGGGACATG 100
|||.||.||||||||.||||||||||||||||||||.||.|||||.||.|
BL01281___top 51 TGAGCGATACTTAGGAAAAAAATATAAAGTAAAAGCCTCGATGGGGCACG 100
BSNT_02631___ 101 TCCGGGATCTTCCAAAAAGTCAAATGGGAGTTGACATAGAACAGAATTTT 150
||.|.|||.|.||.|||||.||.|||||.||||||||.||.|||||.|||
BL01281___top 101 TCAGAGATTTGCCGAAAAGCCAGATGGGCGTTGACATCGAGCAGAACTTT 150
BSNT_02631___ 151 GAACCGAAATATATTACCATTCGAGGTAAAGGTCCGGTATTAAAAGAGCT 200
|||||.|||||.|||||.||.||.||.|||||.||.||.||.|||||..|
BL01281___top 151 GAACCAAAATACATTACGATCCGCGGGAAAGGCCCCGTGTTGAAAGAATT 200
BSNT_02631___ 201 GAAAACGGCAGCGAAAAAAGCCAAAAAAGTGTATCTCGCAGCCGACCCCG 250
.||||||||.||.|||||.||.||||||||.|||||||||||||||||||
BL01281___top 201 AAAAACGGCCGCCAAAAAGGCAAAAAAAGTTTATCTCGCAGCCGACCCCG 250
BSNT_02631___ 251 ACAGAGAAGGGGAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTA 300
||||.|||||||||||||||||.|||||||||||.|||||.||||||||.
BL01281___top 251 ACAGGGAAGGGGAAGCGATTGCGTGGCATTTGGCGCACAGCCTTGATTTG 300
BSNT_02631___ 301 GATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGC 350
||.||.||.||.||||||||.||.||.|||||.||||||||||||||.||
BL01281___top 301 GACCTGAATTCCGACTGCCGCGTCGTATTTAATGAAATTACAAAAGATGC 350
BSNT_02631___ 351 TATTAAGGAATCGTTTAAGCATCCCCGCATGATCAATATGGATTTAGTGG 400
.||.||.|||||.|||||||||||.||||||||||||||||||.|.||.|
BL01281___top 351 GATCAAAGAATCATTTAAGCATCCGCGCATGATCAATATGGATCTTGTCG 400
BSNT_02631___ 401 ATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATC 450
|.||.|||||.||||||.|.|||.|.|||.|.|||||.||.||.||||||
BL01281___top 401 ACGCCCAGCAGGCGAGAAGAATTCTGGACCGCCTTGTAGGGTACAAAATC 450
BSNT_02631___ 451 AGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTT-AGCGCAGGACGCG 499
|||||.||.|||||||||||||| ||||||.||||| ||.||.|||||.|
BL01281___top 451 AGTCCGATATTATGGAAAAAAGT-AAAAAAAGGCTTGAGTGCGGGACGTG 499
BSNT_02631___ 500 TGCAATCCGTTGCCCTCCGTTTGATTATTGACCGTGAAAAAGAGATTAAC 549
|.|||||.|||||.|||||..|.||.||||||||.||.|||||.||.|||
BL01281___top 500 TCCAATCTGTTGCGCTCCGCCTTATCATTGACCGGGAGAAAGAAATCAAC 549
BSNT_02631___ 550 GACTTTAAGCCCGAGGAATATTGGACAATTGACGGTACGTTCTTAAAAGG 599
||.||||..||.||.|||||||||||||||||.||..|.||..|.|||||
BL01281___top 550 GATTTTATACCGGAAGAATATTGGACAATTGAAGGGTCTTTTCTCAAAGG 599
BSNT_02631___ 600 TCAAGAAACCTTTGAAGCGAGCTTTTTCGGGAAAAACGGCAAAAAACTTC 649
|.|||||||.||||||||||||||.|||||.|..|||||..||||.|..|
BL01281___top 600 TAAAGAAACGTTTGAAGCGAGCTTCTTCGGAATCAACGGGGAAAAGCACC 649
BSNT_02631___ 650 CTTTAAATAGTGAAGCTGATGTAAAAGAGATTCTTTCTCAGCTCAAAGGG 699
...|.||.||.||||.||||||.||..|.||.||.||.|.|.||||||||
BL01281___top 650 AGCTGAAAAGCGAAGATGATGTGAAGCAAATCCTATCCCGGATCAAAGGG 699
BSNT_02631___ 700 AATCAATATACAGTTGAAAAA-GTAACCAAAAAGGAACGCAAACGTAATC 748
|| |||..|..||.|.||||| |||||.|||||.|||||.||.||.||||
BL01281___top 700 AA-CAAATTTGAGGTCAAAAAGGTAACGAAAAAAGAACGGAAGCGAAATC 748
BSNT_02631___ 749 CCGCTTTGCCTTTTACCACTTCTACCCTGCAGCAGGAAGCGGCTCGCAAG 798
|.||..|.||.|||||.||.||.||.||.||||||||||||||.|||||.
BL01281___top 749 CTGCGCTCCCATTTACGACGTCGACGCTTCAGCAGGAAGCGGCGCGCAAA 798
BSNT_02631___ 799 CTCAATTTCAGAGCGAAGAAAACGATGATGATTGCACAGCAATTATATGA 848
.|.||||||.|.||.|||||||||||||||||.||.|||||..|.|||||
BL01281___top 799 TTGAATTTCCGGGCAAAGAAAACGATGATGATCGCCCAGCAGCTTTATGA 848
BSNT_02631___ 849 AGGAATTGATTTAGGAAGAGAAGGAACGGTTGGTCTGATCACGTATATGA 898
||||||.|||.|.||.|.||||||||||||.||..|.|||||.|||||||
BL01281___top 849 AGGAATCGATCTCGGCAAAGAAGGAACGGTCGGGTTAATCACTTATATGA 898
BSNT_02631___ 899 GAACGGATTCAACCCGTATTTCAAATACGGCTGTTGATGAAGCAGCTGCA 948
|||||||||||||||||||.||.|||| |||.|.|.||||.|||.|||
BL01281___top 899 GAACGGATTCAACCCGTATCTCGAATA---CTGCTCAAGAAGAAGCGGCA 945
BSNT_02631___ 949 TTTATTGATCAG---ACA-TATGGAAAAGAGTTCCTAGGCGGAAAACGGA 994
|.|||.|||.| ||| ||.||||||||.||..|.||..|.||.||.|
BL01281___top 946 -TCATTCATCGGCGAACAGTACGGAAAAGAATTTTTGGGTAGCAAGCGAA 994
BSNT_02631___ 995 AGCCTGCGAAAAAGAATGAAAATGCCCAGGATGCCCACGAAGCAATTCGG 1044
||||.||.||||||||||||||.||||||||||||||||||||.||..||
BL01281___top 995 AGCCGGCCAAAAAGAATGAAAACGCCCAGGATGCCCACGAAGCGATCAGG 1044
BSNT_02631___ 1045 CCGACATCAGTTCTTAGAAAACCAAGTGAATTAAAAGCAGTCCTCGGCAG 1094
|||||.||.||.||.|||||.||....||..|.||.||.||..|.||.||
BL01281___top 1045 CCGACCTCGGTGCTCAGAAAGCCTTCCGATCTGAAGGCGGTATTGGGAAG 1094
BSNT_02631___ 1095 AGACCAAATGAGACTGTATAAATTAATTTGGGAGCGTTTTGTTGCCAGCC 1144
||||||..|..|.||.||.||..|.||.||||||||.|||||.||.||||
BL01281___top 1095 AGACCAGCTTCGGCTATACAAGCTGATCTGGGAGCGCTTTGTCGCAAGCC 1144
BSNT_02631___ 1145 AAATGGCATCGGCTGTTCTCGATACAATGAGTGTCGACC-TGACAAACAA 1193
|||||||..||||....||.|||||.|||||.||||||| ||| ||||||
BL01281___top 1145 AAATGGCTCCGGCGACACTGGATACGATGAGCGTCGACCTTGA-AAACAA 1193
BSNT_02631___ 1194 CGGTTTGACATTTCGTGCAAATGGAAGTAAAGTCAAGTTTTCCGGGTTTA 1243
|||.|||||||||||.|||||.||.|||||||||||||||||.||.||.|
BL01281___top 1194 CGGGTTGACATTTCGGGCAAACGGCAGTAAAGTCAAGTTTTCAGGCTTCA 1243
BSNT_02631___ 1244 TGAAGGTGTATGTTGAAGGAAAAGACGATCAAATGGAAGAAAAAGACCGG 1293
||||.|||||.||||||||.|||||||||||.||||||||.||..|...|
BL01281___top 1244 TGAAAGTGTACGTTGAAGGCAAAGACGATCAGATGGAAGAGAAGAATAAG 1293
BSNT_02631___ 1294 ATGCTGCCTGA-----CTTACAAGAAGGCGACACGGTATTATCAAAAGAT 1338
|||||.||.|| || ||||||||.||.||..|.||||||||.
BL01281___top 1294 ATGCTTCCGGATCTCGCT-----GAAGGCGATACCGTGCTTTCAAAAGAC 1338
BSNT_02631___ 1339 ATAGAACCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGC 1388
||.||.||.||.|||||.||.||.||||||||||||||.|||||.||.||
BL01281___top 1339 ATCGAGCCCGAACAGCACTTCACACAGCCGCCTCCGCGCTATACGGAAGC 1388
BSNT_02631___ 1389 CCGGCTCGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACAT 1438
..||||.||.|||||.||||||||||..||.|||||.|||||||||||||
BL01281___top 1389 AAGGCTGGTCAAAACGCTTGAAGAACTGGGAATCGGACGTCCATCCACAT 1438
BSNT_02631___ 1439 ATGCTCCGACACTTGATACTATTCAGCGTCGCGGCTACGTGGCATTGGAT 1488
|.||.|||||.|||||.||.||.||....|||||.||.||.||..|.|||
BL01281___top 1439 ACGCGCCGACGCTTGACACGATCCAAAAGCGCGGGTATGTCGCCCTTGAT 1488
BSNT_02631___ 1489 AATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGAT 1538
||||||||.||..||||||||||..|.|||.|.||.||.|||||||||||
BL01281___top 1489 AATAAACGCTTTATTCCGACTGAGCTCGGTGAAATTGTGCTTGACTTGAT 1538
BSNT_02631___ 1539 CATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGG 1588
|||||||||||||||||||||.||||||||||||||.||.||.|||||||
BL01281___top 1539 CATGGAGTTTTTCCCTGAGATTATTAACGTTGAGTTCACCGCCAAAATGG 1588
BSNT_02631___ 1589 AGAGAGATCTTGATCATGTTGAAGAAGGCAATACTGAATGGGTCAAAATT 1638
|.|.|||.||||||.|.||||||||.||.||.|.|.|||||||..|.||.
BL01281___top 1589 AAAAAGAGCTTGATGACGTTGAAGACGGAAACATTCAATGGGTGCAGATC 1638
BSNT_02631___ 1639 ATTGATAATTTCTACACCGATTTTGAAAAACGCGTCAAAAAAGCCGAATC 1688
||.|||...||.||||..||.||||||||.||.||..|||||||.|||.|
BL01281___top 1639 ATCGATTCCTTTTACAAGGACTTTGAAAAGCGTGTTGAAAAAGCGGAAGC 1688
BSNT_02631___ 1689 GGAAATGAAGGAAGTTGAGATTGAACCAGAGTATGCTGGAGAGGATTGTG 1738
.||.|||.|||||||.|||||.|||||.||||||||.||.|..||.||||
BL01281___top 1689 CGAGATGCAGGAAGTGGAGATCGAACCGGAGTATGCAGGTGTTGACTGTG 1738
BSNT_02631___ 1739 AATTGTGCAGTTCTCCAATGGTATATAAAATGGGACGGTACGGTAAATTC 1788
||..||||.|...|||.|||||.|||||||||||.||||||||.|||||.
BL01281___top 1739 AAGCGTGCGGACATCCGATGGTCTATAAAATGGGCCGGTACGGCAAATTT 1788
BSNT_02631___ 1789 TTAGCTTGCTCCAACTTCCCTGACTGCCGGAACACGAAACCGATTGTGAA 1838
.|.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||
BL01281___top 1789 ATGGCCTGCTCCAATTTTCCGGACTGCCGCAACACCAAGCCGATCGTAAA 1838
BSNT_02631___ 1839 ACAAATCGGTGTGAAGTGCCCGAGC-TGCGGAGAA--GGAAACATTGTTG 1885
|.|.|||||.||.||.||||| |.| ||| |.|| ||.|||||.||.|
BL01281___top 1839 AGAGATCGGCGTCAAATGCCC-ATCATGC--AAAACCGGCAACATCGTCG 1885
BSNT_02631___ 1886 AGCGAAAATCGAAAAAGAAACGGGTGTTTTACGGCTGTGACCGTTATCCG 1935
||||.|||||||||||....||..|.|||||||||||||||||.|||||.
BL01281___top 1886 AGCGCAAATCGAAAAAACGCCGCATTTTTTACGGCTGTGACCGCTATCCT 1935
BSNT_02631___ 1936 GACTGTGAATTCGTATCATGGGACAAACCAATTGAACGAAAATGCCCGAA 1985
||.||||||||||||||||||||.|||||..|||||||.|||||.|||||
BL01281___top 1936 GAATGTGAATTCGTATCATGGGATAAACCGCTTGAACGGAAATGTCCGAA 1985
BSNT_02631___ 1986 ATGCGGAAAAATGCTCGTCGAGAAAAAACTCAAAAAAGGCATACAAGTCC 2035
|||||...|.|||||.||.||||||||.||||||||||||.|.|||||.|
BL01281___top 1986 ATGCGAGGACATGCTTGTGGAGAAAAAGCTCAAAAAAGGCGTTCAAGTGC 2035
BSNT_02631___ 2036 AATGCGTGGAATGCGATTATAAGGAAGAACCACAGAAGTAG 2076
|.|||||..|.|||||||||||||||||||.|||.||||||
BL01281___top 2036 AGTGCGTTAATTGCGATTATAAGGAAGAACAACAAAAGTAG 2076
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