Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02635 and BL01278

See Amino acid alignment / Visit BSNT_02635 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_02635___clpQ.1.5803.seq
#    -bsequence dna-align/BL01278___clpQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02635___clpQ-BL01278___clpQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02635___clpQ-BL01278___clpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02635___clpQ
# 2: BL01278___clpQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity:     433/553 (78.3%)
# Similarity:   433/553 (78.3%)
# Gaps:          14/553 ( 2.5%)
# Score: 1677.0
# 
#
#=======================================

BSNT_02635___      1 ATGTCATCTTTTCATGCGACCACAATATTTGCCGTACAGCATAAAGGACG     50
                     ||||||||||||||.||.||.||.|||||||||||.|||||.||.|||..
BL01278___clp      1 ATGTCATCTTTTCACGCAACGACGATATTTGCCGTCCAGCACAACGGAAA     50

BSNT_02635___     51 AAGCGCTATGTCCGGAGACGGCCAAGTAACATTTGGTCAGGCTGTTGTCA    100
                     ||||||.|||.|.|||||||||||.||.||.||.|||||||||||.||||
BL01278___clp     51 AAGCGCGATGGCGGGAGACGGCCAGGTTACGTTCGGTCAGGCTGTCGTCA    100

BSNT_02635___    101 TGAAACACACGGCACGGAAAGTGAGAAAACTGTTTAACGGCAAAGTTC-T    149
                     ||||.||.||.|||.|.||.||.||||||||.||.||||| ||||.|| |
BL01278___clp    101 TGAAGCATACCGCAAGAAAGGTAAGAAAACTCTTCAACGG-AAAGGTCAT    149

BSNT_02635___    150 TGCTGGCTTTGCGGGATCTGTTGCAGACGCTTTCACTTTATTCGAAAAGT    199
                     |||.||.|||||.||.||||||||||||||||||||..|.||.||||.||
BL01278___clp    150 TGCCGGTTTTGCCGGTTCTGTTGCAGACGCTTTCACGCTCTTTGAAATGT    199

BSNT_02635___    200 TTGAAGCTAAGCTTGAAGAATATAACGGCAACTTAAAACGGGCGGCTGTT    249
                     |||||||.||||||||||||||.||||||||.||..|.||||||||.||.
BL01278___clp    200 TTGAAGCGAAGCTTGAAGAATACAACGGCAATTTGCAGCGGGCGGCAGTC    249

BSNT_02635___    250 GAGCTTGCGAAGGAATGGCGCAGTGATAAAGTGCTAAGAAAGCTCGAAGC    299
                     ||||||||.||.||.|||||.||.||||||||.||.||||||||.||.||
BL01278___clp    250 GAGCTTGCAAAAGAGTGGCGAAGCGATAAAGTCCTCAGAAAGCTTGAGGC    299

BSNT_02635___    300 CATGCTGATTGTTATGAAT-----CAGGATACTTTGCTTCTCGTATCGGG    344
                     .||||||||.||.||||||     |||.|     ||||.|||||.||.||
BL01278___clp    300 GATGCTGATCGTCATGAATGCCGACAGCA-----TGCTGCTCGTTTCCGG    344

BSNT_02635___    345 AACAGGCGAGGTGATCGAACCAGATGACGGCATTCTCGCGATTGGATCAG    394
                     |||||||||.|||||.|||||.||.|||||||||.|.|||||.||.||||
BL01278___clp    345 AACAGGCGAAGTGATTGAACCGGACGACGGCATTTTGGCGATCGGCTCAG    394

BSNT_02635___    395 GAGGCAATTACGCTTTGGCAGCGGGAAGAGCACTGAAAAAGCATGCCGG-    443
                     |.||.||.|||||..|.|||||.|||||.||.||||||...|||||||| 
BL01278___clp    395 GTGGAAACTACGCGCTTGCAGCCGGAAGGGCGCTGAAACGTCATGCCGGC    444

BSNT_02635___    444 TGAAAGCATGTCTGCAAGTGAGATTGCCAGAGCCGCGTTAGAAACAGCAG    493
                     .|..|||.||.| ||.|..|.||||||.||.||..|..|.|||||.||.|
BL01278___clp    445 AGCCAGCTTGAC-GCGAAAGCGATTGCGAGGGCTTCACTTGAAACCGCGG    493

BSNT_02635___    494 GCGAAATTTGTGTTTACACGAACGATCAAATCATACTGGAAGAGCTTGAA    543
                     |||||||.|||||.||.|||||||||||.|||||..|.|||||.||||||
BL01278___clp    494 GCGAAATCTGTGTGTATACGAACGATCAGATCATTGTAGAAGAACTTGAA    543

BSNT_02635___    544 TAG    546
                     |||
BL01278___clp    544 TAG    546


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