Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02636 and BL01277
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence dna-align/BSNT_02636___hslU.1.5803.seq
# -bsequence dna-align/BL01277___hslU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02636___hslU-BL01277___hslU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02636___hslU-BL01277___hslU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02636___hslU
# 2: BL01277___hslU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1423
# Identity: 1107/1423 (77.8%)
# Similarity: 1107/1423 (77.8%)
# Gaps: 38/1423 ( 2.7%)
# Score: 4252.0
#
#
#=======================================
BSNT_02636___ 1 ATGGAAAAAAAACCGTTAACTCCTAGACAGATTGTAGATCGGTTAGACCA 50
|||||||||||.|||.|.||||||||.|||||.||.||..||.|.||.||
BL01277___hsl 1 ATGGAAAAAAAGCCGCTGACTCCTAGGCAGATCGTCGAAAGGCTTGATCA 50
BSNT_02636___ 51 ATATATTGTCGGTCAGCAAAATGCGAAAAAAGCTGTCGCCGTGGCATTAA 100
|||.||.|||||.||||...|||||||||||||.||||||||||||||.|
BL01277___hsl 51 ATACATCGTCGGCCAGCTCGATGCGAAAAAAGCGGTCGCCGTGGCATTGA 100
BSNT_02636___ 101 GAAACCGCTATAGAAGAAGTCTTCTGGATGAAAAGCTGAAGGACGAGGTC 150
|.||||||||.||||||||||||||.||||||||.|||...||.||..||
BL01277___hsl 101 GGAACCGCTACAGAAGAAGTCTTCTTGATGAAAAACTGCGCGAAGAAATC 150
BSNT_02636___ 151 GTTCCGAAAAACATTTTAATGATGGGTCCTACCGGCGTCGGGAAAACTGA 200
||||||||||||||.||.||||||||.||.||.||.||.||.|||||.||
BL01277___hsl 151 GTTCCGAAAAACATATTGATGATGGGCCCGACAGGTGTGGGAAAAACCGA 200
BSNT_02636___ 201 AATTGCCAGACGAATCGCTAAGCT-TTCAGGTGCGCCATTTATCAAAATT 249
.|||||.|||||||||||.||.|| .|| ||.||.||.||..|||||||.
BL01277___hsl 201 GATTGCAAGACGAATCGCGAAACTCGTC-GGCGCTCCGTTCGTCAAAATC 249
BSNT_02636___ 250 GAAGCTACTAAATTTACCGAAGTCGGCTATGTAGGCAGAGATGTTGAATC 299
|||||.||.||.||.||.||||||||.|||||.|||||||||||.||.||
BL01277___hsl 250 GAAGCGACGAAGTTCACGGAAGTCGGTTATGTGGGCAGAGATGTGGAGTC 299
BSNT_02636___ 300 AATGGTCAGAGATCTTGTGGAGACTTCTGTTCGTCTTATCAAAGAAGAGA 349
.||||||||.|||||||||||.||.||.||.||.||..|||||||.||.|
BL01277___hsl 300 GATGGTCAGGGATCTTGTGGAAACGTCAGTCCGCCTCGTCAAAGAGGAAA 349
BSNT_02636___ 350 AAATGAATGAAGTAAAGGAACAGGCA-----GAAGAAAATGCAAACAAAC 394
|||||||.|||||.|| ||||| ||||||||.|||||.||||
BL01277___hsl 350 AAATGAACGAAGTGAA-----AGGCATCGCTGAAGAAAACGCAAATAAAC 394
BSNT_02636___ 395 GCATTGTTCGTCTGTTAGTTCCTGGGAAG-AAAAAACAATCTGGCGTTAA 443
||.|.||.||.|||.|.||.|| |||||| ||||||||..|.||.|..||
BL01277___hsl 395 GCCTCGTCCGCCTGCTTGTACC-GGGAAGAAAAAAACAGACAGGTGCGAA 443
BSNT_02636___ 444 AAATCCGTTTGAAATGTTTTTTGGAGGCAGCCAGCCGAATGGTGAAGA-- 491
||||||.|||||||||.|.|||||.||.|..||| |.|.||||
BL01277___hsl 444 AAATCCTTTTGAAATGCTGTTTGGCGGAAATCAG------GATCAAGAAA 487
BSNT_02636___ 492 ----TGAGGCGGAGAGCCAGGAAGAAGCAAACATCGAAGAAAAAAGAAAA 537
|||.|||||.|..||.|||||.||..|.||||||.|.||..|||||
BL01277___hsl 488 CTGGTGAAGCGGAAAAGCAAGAAGACGCGGATATCGAAAACAACCGAAAA 537
BSNT_02636___ 538 CGAATGGCGCATCAGCTGGCTTTAGGAGAGCTCGAAGACTACTATGTAAC 587
||.||.|||||||||||.|||.|.||.||.||.||||||.|.|||||.||
BL01277___hsl 538 CGGATTGCGCATCAGCTTGCTCTCGGCGAACTTGAAGACCATTATGTCAC 587
BSNT_02636___ 588 AGTAGAAGTCGAAGAGCAGCAGCCTTCTATGTTTGACATGCTGCAGGGCT 637
.||.||.||.||.|||||||||||.||.||||||||.|||||.||.||||
BL01277___hsl 588 CGTTGAGGTGGAGGAGCAGCAGCCGTCCATGTTTGATATGCTCCAAGGCT 637
BSNT_02636___ 638 CGGGTATGGAGCAGATGGGTATGAACATGCAGGATGCGCTGAGCGGATTA 687
||||||||||.||||||||.||||||||||||||||||||.|||.|..|.
BL01277___hsl 638 CGGGTATGGAACAGATGGGCATGAACATGCAGGATGCGCTCAGCAGCCTG 687
BSNT_02636___ 688 ATGCCAAAGAAAAAGAAA---CGGCGCAAAATGACAGTCAGAGAAGCCAG 734
||||| |||||||||| ||.|||||..|.||.|||||.|||||..|
BL01277___hsl 688 ATGCC---GAAAAAGAAAAAGCGCCGCAAGCTTACGGTCAGGGAAGCGCG 734
BSNT_02636___ 735 AAAAGTCCTGACGAATGAAGAAGCAAGCAAA-CTCATCGATATGGATGAA 783
||||||.||||||||||||||||| .||||| ||||||||||||||.|||
BL01277___hsl 735 AAAAGTGCTGACGAATGAAGAAGC-GGCAAAGCTCATCGATATGGACGAA 783
BSNT_02636___ 784 GTCAG-CCAGGAAGCTGTTCAGAGAGCAGAAGAGAGCGGG-ATTATCTTT 831
| |.| ||||||||||||.||||||||.|||.|| .|||| ||.||||||
BL01277___hsl 784 G-CTGCCCAGGAAGCTGTCCAGAGAGCCGAACAG-TCGGGAATCATCTTT 831
BSNT_02636___ 832 ATCGATGAGATTGATAAAATCGCAAAGAACGGCGGTGCATCTTCTTCTGC 881
|||||||||||.|||||||||||.||.||..|||||||.|||||.||.||
BL01277___hsl 832 ATCGATGAGATCGATAAAATCGCCAAAAAGAGCGGTGCTTCTTCATCGGC 881
BSNT_02636___ 882 CGATGTTTCAAGAGAAGGCGTTCAGCGGGATATTCTGCCGATTGTTGAGG 931
.||.||.||||||||||||||.|||||.||||||||.|||||||||||.|
BL01277___hsl 882 AGACGTCTCAAGAGAAGGCGTGCAGCGCGATATTCTTCCGATTGTTGAAG 931
BSNT_02636___ 932 GCTCAACCGTTGTCACAAAATATGGTTCTGTAAAAACAGACCATGTATTA 981
|.||.|||||..|.|||||.||.|||.|.||.|||||.||.||.||..|.
BL01277___hsl 932 GATCTACCGTCATGACAAAGTACGGTGCGGTCAAAACGGATCACGTTCTG 981
BSNT_02636___ 982 TTTATTGCAGCAGGAGCGTTTCATATGGCCAAACCGTCTGATTTGATTCC 1031
||.|||||.|||||.||.||.||.|||||.||.||.||.|||.|.|||||
BL01277___hsl 982 TTCATTGCTGCAGGTGCATTCCACATGGCGAAGCCTTCAGATCTAATTCC 1031
BSNT_02636___ 1032 TGAGCTGCAGGGGCGTTTCCCGATTCGTGTAGAACTGAACAAACTCACGG 1081
|||||||||||||||.||.||.||.||.||.||.||..|.||.||.|...
BL01277___hsl 1032 TGAGCTGCAGGGGCGCTTTCCAATACGCGTTGAGCTTCAAAAGCTGAGCA 1081
BSNT_02636___ 1082 TAGACGACTTCGTGAGAATTTTGGTTGAGCCGGATAATGCGCTGCTGAAA 1131
|.||.|||||.||||.||||||...||||||.||.||.||.||.||.||.
BL01277___hsl 1082 TCGATGACTTTGTGAAAATTTTAACTGAGCCTGACAACGCTCTTCTTAAG 1131
BSNT_02636___ 1132 CAATATCAGGCATTATTGCAGACAGAAGGTATATCTCTTGAATTTTCTGA 1181
||.|||.||||.||||||.||||.||||||||||||||||||||||||||
BL01277___hsl 1132 CAGTATAAGGCTTTATTGAAGACGGAAGGTATATCTCTTGAATTTTCTGA 1181
BSNT_02636___ 1182 CGAAGCTATTCATAAGATTGCTGAAGTTGCTTATCATGTGAACCAGGACA 1231
|||.|||||||.|||||||||.|||||.||||||||||||||||||||||
BL01277___hsl 1182 CGATGCTATTCGTAAGATTGCAGAAGTGGCTTATCATGTGAACCAGGACA 1231
BSNT_02636___ 1232 CAGATAATATCGGTGCGAGACGCCTTCATACAATACTTGAACGCCTATTA 1281
||||.|||||.||.||||||.|.|||||.||.||..|.|||||.||.||.
BL01277___hsl 1232 CAGACAATATTGGGGCGAGAAGGCTTCACACCATTTTGGAACGTCTTTTG 1281
BSNT_02636___ 1282 GAAGATTTGTCGTTTGAAGCTCCAGATGTAACGATGGAGAAAATAACGAT 1331
|||||..||||.||.||.|||||.|||||.||||||||..||.|....||
BL01277___hsl 1282 GAAGAACTGTCATTCGAGGCTCCGGATGTGACGATGGAAGAAGTGGTCAT 1331
BSNT_02636___ 1332 TACACCACAGTATGTCGAAGAAAAGCTCGGAACGATAGCCAAAAACAAAG 1381
.||.||.||.|||||.||||||||||||||..||||.||.||.||.||.|
BL01277___hsl 1332 CACGCCTCAATATGTTGAAGAAAAGCTCGGTTCGATCGCTAAGAATAAGG 1381
BSNT_02636___ 1382 ATTTAAGTCAATTTATATTGTGA 1404
|||||||.||.|||||.||.|.|
BL01277___hsl 1382 ATTTAAGCCAGTTTATTTTATAA 1404
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