Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02637 and BL01276

See Amino acid alignment / Visit BSNT_02637 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_02637___codY.1.5803.seq
#    -bsequence dna-align/BL01276___codY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02637___codY-BL01276___codY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02637___codY-BL01276___codY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02637___codY
# 2: BL01276___codY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 781
# Identity:     624/781 (79.9%)
# Similarity:   624/781 (79.9%)
# Gaps:           2/781 ( 0.3%)
# Score: 2480.0
# 
#
#=======================================

BSNT_02637___      1 ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGC     50
                     |||||||||||||||||||||||||..|||||..|.|||||||||..|||
BL01276___cod      1 ATGGCTTTATTACAAAAAACAAGAAAGATTAATGCAATGCTGCAAAATGC     50

BSNT_02637___     51 GGCAGGGAAACCGGTAAACTTCAAGGAAATGGCGGAGACGCTGCGGGATG    100
                     |||||||||.|||||.||.||.||.||||||||.||.|||||.||.||||
BL01276___cod     51 GGCAGGGAAGCCGGTTAATTTTAAAGAAATGGCCGAAACGCTTCGCGATG    100

BSNT_02637___    101 TAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGG    150
                     |.||||||||.||.||||||||.||.|||||||||||.||.||.||.||.
BL01276___cod    101 TGATTGATTCGAACATTTTCGTCGTCAGCCGCAGAGGAAAGCTTCTCGGT    150

BSNT_02637___    151 TATTCTATTAACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGA    200
                     |..||.||.||||||||.||.||||||||.||.|||||||||||||||||
BL01276___cod    151 TTCTCGATCAACCAGCAGATCGAAAATGACCGGATGAAAAAAATGCTTGA    200

BSNT_02637___    201 GGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTTAATGTCCCTG    250
                     .||.||.||.||.||||||||.|||||.||||..|||||.||..|.||.|
BL01276___cod    201 AGAGCGCCAGTTTCCTGAAGATTATACAAAAAGCCTGTTCAACATTCCGG    250

BSNT_02637___    251 AAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTT    300
                     ||||.||.||||||.|.||.||.||.||.|||||.||.|||||||||||.
BL01276___cod    251 AAACGTCATCTAACCTTGACATCAACAGCGAATACACAGCTTTCCCTGTG    300

BSNT_02637___    301 GAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCAT    350
                     ||.|||.|.||..||||.|||||.|||.|.||.||..|.||.||||||||
BL01276___cod    301 GAAAACCGCGATTTGTTCCAAGCGGGTCTGACCACGGTCGTTCCGATCAT    350

BSNT_02637___    351 CGGAGGCGGGGAAAGATTAGGAACACTT-ATTCTTTCGCGTTTACAAGAT    399
                     ||||||.||.||||||.|.||.|| ||| |||||.||.||..|.||.||.
BL01276___cod    351 CGGAGGAGGCGAAAGACTGGGCAC-CTTGATTCTGTCCCGCCTTCAGGAG    399

BSNT_02637___    400 CAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGT    449
                     .|||||.|.||.||.||..|.||.||.||.|||||.|||||.||.||.||
BL01276___cod    400 AAATTCGAGGATGACGATCTGATCCTTGCCGAATATGGCGCCACTGTCGT    449

BSNT_02637___    450 CGGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAA    499
                     .|||||||||||.||.|||||.|||||.|||||.||.|||||||||||..
BL01276___cod    450 AGGAATGGAAATTCTCAGAGAGAAAGCGGAAGAGATCGAAGAGGAAGCGC    499

BSNT_02637___    500 GAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAG    549
                     |.||||||||.|||||.||||||||.|||||.||.||.||||||||.|||
BL01276___cod    500 GCAGCAAAGCGGTCGTTCAAATGGCGATCAGTTCACTATCTTACAGCGAG    549

BSNT_02637___    550 CTTGAAGCAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCT    599
                     ||||||||||||||.||.|||||||||||||||||||||||||||||.||
BL01276___cod    550 CTTGAAGCAATTGAACATATTTTTGAGGAGCTTGACGGAAATGAAGGCCT    599

BSNT_02637___    600 TCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTA    649
                     .|||||.||.|||||||||||.|||||.||||||||.|||||.||.||.|
BL01276___cod    600 GCTTGTCGCTAGTAAAATTGCAGACCGCGTCGGCATCACCCGCTCGGTCA    649

BSNT_02637___    650 TTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGA    699
                     ||||.|||||.|||.|.||.||.||.|||||||||||.||.||.||.||.
BL01276___cod    650 TTGTCAACGCGCTCCGTAAACTTGAAAGCGCCGGTGTCATTGAATCAAGG    699

BSNT_02637___    700 TCATTAGGAATGAAAGGTACTTATATCAAGGTACTAAACAACAAATTCTT    749
                     |||.||||.||||||||.||.||.|||||.||.||.|||||||||||.||
BL01276___cod    700 TCACTAGGGATGAAAGGCACATACATCAAAGTGCTGAACAACAAATTTTT    749

BSNT_02637___    750 AATTGAATTAGAAAATCTAAAATCTCATTAA    780
                     .||.||.||||||||.|||||.|||||||||
BL01276___cod    750 GATGGAGTTAGAAAAACTAAAGTCTCATTAA    780


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