Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02642 and BL01273

See Amino acid alignment / Visit BSNT_02642 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_02642___fliE.1.5803.seq
#    -bsequence dna-align/BL01273___fliE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02642___fliE-BL01273___fliE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02642___fliE-BL01273___fliE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02642___fliE
# 2: BL01273___fliE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     222/332 (66.9%)
# Similarity:   222/332 (66.9%)
# Gaps:          25/332 ( 7.5%)
# Score: 672.0
# 
#
#=======================================

BSNT_02642___      1 GTGATTAATGCAATTTCTCCTTTTCAGGTTCAAAATACTCAAAACACTC-     49
                     .||.||||||.|||.|||||.|||...||||||     ||....||..| 
BL01273___fli      1 ATGGTTAATGGAATCTCTCCGTTTGGAGTTCAA-----TCCGTGCAGGCG     45

BSNT_02642___     50 --AA--AATGCAACAAATCAAGTAAACAATAGCCAA--AAAACAGATTCT     93
                       ||  ||||||||||||||..|.||.||    |||  |..||.|    |
BL01273___fli     46 GGAACGAATGCAACAAATCAGATCAAGAA----CAAGCAGGACGG----T     87

BSNT_02642___     94 TCA---AATCAAACAAGCTTTTCGGAGCTTTTAAAAAACTCTATTAGTTC    140
                     |||   ||.|||...||||||||..|..|..|.|||.|.|||||.|.|.|
BL01273___fli     88 TCAGAGAACCAAGTCAGCTTTTCCAACGTGCTGAAAGATTCTATCAATGC    137

BSNT_02642___    141 GTTAAATGAGTCCCAAGTAGCTTCTGACAACATGACTAATGC-CTTGGCT    189
                     .||.|||.|.||.|||...|..|||||.||..||||.||.|| ||| |||
BL01273___fli    138 TTTGAATCAATCTCAAAATGAATCTGATAAACTGACAAACGCGCTT-GCT    186

BSNT_02642___    190 GCAGGAAAAGATGTAAATCTTGATGAGGTCATGATCGCTGCTCAAAAAGC    239
                     ...||..|.|||||.||.||||||||.||.|||||.||.||.||.||.||
BL01273___fli    187 CTCGGTCAGGATGTCAACCTTGATGAAGTGATGATTGCAGCCCAGAAGGC    236

BSNT_02642___    240 TAGCATCTCTCTAACTGCAGCAACAGAGTTCCGCAATAAAGCTGTGGAAG    289
                     .|.|||..|..|.||.||.||.||.||.||||||||.|||||.||.||||
BL01273___fli    237 AAACATTACATTGACGGCTGCGACGGAATTCCGCAACAAAGCGGTTGAAG    286

BSNT_02642___    290 CTTATCAGGAGATTATGAGAATGCAAATGTAG    321
                     ||||||||||.||.|||||||||||||||||.
BL01273___fli    287 CTTATCAGGAAATCATGAGAATGCAAATGTAA    318


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