Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02644 and BL01272
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence dna-align/BSNT_02644.1.5803.seq
# -bsequence dna-align/BL01272___fliF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02644-BL01272___fliF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02644-BL01272___fliF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02644
# 2: BL01272___fliF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1671
# Identity: 697/1671 (41.7%)
# Similarity: 697/1671 (41.7%)
# Gaps: 768/1671 (46.0%)
# Score: 2264.0
#
#
#=======================================
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 1 ATGAATCGTAATTTATTGCAAATTAAAACGAAAATAACTGATTTTTGGAA 50
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 51 AAACAGATCAAAGCTGCAGAAGATTCTGCTGATCGGCATTGTCGCTCTGG 100
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 101 CAGTCATCCTGTCAATCATCATTGGAATTGTTGCTTCGTCAAATAAAATG 150
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 151 GTGCCGCTCTATAAAGATTTGTCAGCTGAAGAAACCGGCCAAATCAAACA 200
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 201 GGTGCTCGATGAAAAAGGTATTCCATCTGAAGTTGCGACTGACGGTTCAG 250
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 251 TCATCAAAGTTCCGGAAGAAAAAGTCGATGAACTGAAAGTCGATCTTGCC 300
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 301 GCAGAGGGCCTTCCGAAAAGCGGGAGCATCGATTATTCATTCTTTGGCGA 350
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 351 AAATGCCGGTTTTGGCATGACGGACAACGAATTTGACGTTTTGAAAGTGA 400
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 401 AAGCCACGCAAACCGAGCTATCCAACCTCATCAAAGGAATAGACGGGATT 450
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 451 AAAGATTCGAAGGTTATGATTAACCTGCCGAAGGAATCCGTCTTTGTCGG 500
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 501 AGAGGAAAAGCCGGAAGCATCCGCTTCGATTGTTCTTCAGGTGAAGCCCG 550
BSNT_02644 0 -------------------------------------------------- 0
BL01272___fli 551 GCCACACGCTTGATCAAAATGAAATCAACGGCCTTTATCATCTCGTATCG 600
BSNT_02644 1 ---------------------------------------ATGGACCAAAA 11
|||||.|||||
BL01272___fli 601 AAAAGCGTGCCGAACCTTGACCCGAAAAACATCGTGATCATGGATCAAAA 650
BSNT_02644 12 TTCTACATACTACGA-CAAATCAGACAGCGATGCAGGGTCCTACGCGGAT 60
.||.|||||.||||| |||| |||.||..||..|.||.||.|||||.||.
BL01272___fli 651 CTCCACATATTACGATCAAA-CAGGCAAAGAGTCCGGTTCTTACGCCGAC 699
BSNT_02644 61 AGTTATTCTTCTCAGCAAGG--AATTAAGTCTCAAGTTGAAAAAGACATT 108
||.||||||||.|| |||| |.|.|||.|.||..|.|||||.|||.|.
BL01272___fli 700 AGCTATTCTTCCCA--AAGGGAAGTCAAGGCCCAGATCGAAAAGGACCTG 747
BSNT_02644 109 CAAAAACATGTACAGTCACTGCTGGGTACGATGATGGGCCAAGATAAAGT 158
||||.|||..|.||..|..||||.||.|||||||||||.||.||||||||
BL01272___fli 748 CAAAGACAAATCCAAACCATGCTCGGCACGATGATGGGACAGGATAAAGT 797
BSNT_02644 159 CGTTGTCTCCGTTACAGCAGACATTGATTTCACAAAAGAAAATCGGACAG 208
.|||||.|||||.|||.|.|||||.|||||||||||||||||..||||.|
BL01272___fli 798 GGTTGTATCCGTCACATCTGACATCGATTTCACAAAAGAAAACAGGACGG 847
BSNT_02644 209 AAGACATTGTCGAACCTGTGGATAAAGAAAACATGGAAGGCATTGCAGTC 258
|||||.|.||.||||||||.||.||||||||.||||||||.||..|.|||
BL01272___fli 848 AAGACCTGGTTGAACCTGTCGACAAAGAAAATATGGAAGGAATCACGGTC 897
BSNT_02644 259 AGCGCTGAAAAGGTATCTGAAACATAT------CAGGGCGACGGTGCAGC 302
|||||.||....||...|||||||||| ||||| |||
BL01272___fli 898 AGCGCAGAGCGCGTCAGTGAAACATATTCCGGACAGGG---------AGC 938
BSNT_02644 303 -CAACGGCGGAACTGC-----CGGAACCGGCGAGGAAGATGTAACAAATT 346
||| ||||.| .|| ||||||.||.||..|.||||||||.||.|
BL01272___fli 939 ACAA--GCGGGA-GGCGTCAACGGAACAGGTGAAAACGATGTAACGAACT 985
BSNT_02644 347 ATAAGGCTGACGGTGAAAATACCGAAAGCGGAA------------ACTAC 384
|| |||| |.||.|||.|||||| ||||.
BL01272___fli 986 AT---GCTG---------AAACAGAAGGCGGAACAGGCAACGGAGACTAT 1023
BSNT_02644 385 GAAAAAAACAGC-AACAA--AATCAATTACGAGGTTAACCGAATTCATAA 431
||.||| ||| ||.|| ||||||..|.||.||.|||.||||.|||||
BL01272___fli 1024 GAGAAA---AGCGAAGAACGAATCAACAATGAAGTCAACAGAATCCATAA 1070
BSNT_02644 432 AGAAATCGCTGAAAGTCCTTATAAGGTCAGAGATTTAGGGATTCAAGTAA 481
||||||||||||.||.||.||.||..||||||||.|.||..|.||.||.|
BL01272___fli 1071 AGAAATCGCTGAGAGCCCGTACAAAATCAGAGATCTGGGCGTCCAGGTCA 1120
BSNT_02644 482 TGGTAGAGCCGCCTGATGCCAAAAACACAGC-GTCGCTATCAACTGAAAG 530
||||.||.|||||||||||.||.||| |.|| |||.||..|..|||||||
BL01272___fli 1121 TGGTTGAACCGCCTGATGCAAACAAC-CCGCAGTCACTGCCTGCTGAAAG 1169
BSNT_02644 531 ACAGGATGAAATACAAAAAATCCTTTCAACTGTAGTCAGAACATCTTTGG 580
..||||.||.||..||||||||||.|||||..|.||.|.|||||| |
BL01272___fli 1170 GGAGGACGATATTAAAAAAATCCTCTCAACCATTGTGAAAACATC----G 1215
BSNT_02644 581 AT-------AAAGATGAAACGCAAAACCAGAATTTATCT----GATGCTG 619
|| ||..||||| |.|.|.|| ||| ||||..|
BL01272___fli 1216 ATTGACAAGAACTATGAA--GAAGAGCC--------TCTGACAGATGAGG 1255
BSNT_02644 620 ATATCAATAATAAGATTGTTGTCTCCGTTCAGCCATTCGACGGCAA--AG 667
||.|..|.|||||.||.|||||.||.||.||..|.||||||||||| ||
BL01272___fli 1256 ATGTTGAAAATAAAATCGTTGTTTCTGTCCAATCGTTCGACGGCAAGCAG 1305
BSNT_02644 668 TCAATTTGGATACAAATACGGAAAAATCCTCAGGTATCCCGCTGTGGGCA 717
.||| |.|||..|...|||||||.|..| ||.||.|||.|||||||.
BL01272___fli 1306 ACAA--TCGATGAAGGAACGGAAACAGGC---GGCATACCGATGTGGGCT 1350
BSNT_02644 718 TATATTGTAGGCGGTGTTTTAATCGCAGCGATCATTGTT---------CT 758
||.||.|.|||||| .||||||.|..|||.| ||
BL01272___fli 1351 TACATCGCAGGCGG---------AGCAGCGCTTGTTGCTGTAATCGGCCT 1391
BSNT_02644 759 GATCATTATGCTTATCAGAA-----AGAAACGGGCGCAAGAGGATGAATT 803
.|||||...||||.|||||| |.|||..| |||.||.||||.
BL01272___fli 1392 CATCATCTGGCTTGTCAGAAGACGTAAAAATAG-----AGATGACGAATA 1436
BSNT_02644 804 TGAGGAA-TATGAGTATGAGGTTCCTCAAGAACC-AATCAATTTGCCTGA 851
.|||||| .||| ||||||....|||||.||.|| |.||...||| ||||
BL01272___fli 1437 CGAGGAAGAATG-GTATGAAACGCCTCAGGAGCCGATTCGGGTTG-CTGA 1484
BSNT_02644 852 TATCAACGAAGAGGAAAATGAAACAGCGGAATCAGTCAGACGAAAACAGC 901
|.|.||| .|.|||||.||.||||..|||.|.||||||||||||||||
BL01272___fli 1485 TGTGAAC---AATGAAAAAGAGACAGAAGAAACTGTCAGACGAAAACAGC 1531
BSNT_02644 902 TTGAAAAGATGGCGAAAGACAAGCCGGAAGATTTTGCAAAACTGCTGAGA 951
|||||||.|||||||||||||||||.|||||.||.||.|||.|.|||.|.
BL01272___fli 1532 TTGAAAAAATGGCGAAAGACAAGCCTGAAGAATTCGCCAAATTACTGCGC 1581
BSNT_02644 952 AGCTGGCTGGCCGAGGATTAG 972
|||||||||.|||||||||||
BL01272___fli 1582 AGCTGGCTGACCGAGGATTAG 1602
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