Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02645 and BL01271

See Amino acid alignment / Visit BSNT_02645 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_02645___fliG.1.5803.seq
#    -bsequence dna-align/BL01271___fliG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02645___fliG-BL01271___fliG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02645___fliG-BL01271___fliG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02645___fliG
# 2: BL01271___fliG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1026
# Identity:     807/1026 (78.7%)
# Similarity:   807/1026 (78.7%)
# Gaps:          18/1026 ( 1.8%)
# Score: 3136.5
# 
#
#=======================================

BSNT_02645___      1 ATGGCGAGACGTG-ATCAAGATAAGCTTACAGGAAAACAAAAAGCAGCCA     49
                     ||||| |.|..|| |.|||||.|.|||||||||.|||||||||||.||||
BL01271___fli      1 ATGGC-AAAAATGAAACAAGACAGGCTTACAGGCAAACAAAAAGCGGCCA     49

BSNT_02645___     50 TTCTCATGATTTCCTTGGGGTTAGATGTGTCAGCTTCTGTCTATAAGCAC     99
                     ||||||||||.|||||.|||.|.||||||||||||||.||.||.|||||.
BL01271___fli     50 TTCTCATGATATCCTTAGGGCTTGATGTGTCAGCTTCCGTTTACAAGCAT     99

BSNT_02645___    100 TTAACCGATGAAGAAATTGAAAGGCTTACTCTGGAAATATCAGGTGTTCG    149
                     |||||.||||||||.||.||||||||.||.||.|||||||||..|| ||.
BL01271___fli    100 TTAACAGATGAAGAGATCGAAAGGCTGACGCTTGAAATATCAAATG-TCA    148

BSNT_02645___    150 AAGC-GTCGATCA--TCAAAAAAAGGATGAAATCATAGAAGAATTTCATA    196
                     .||| ||  ||||  |.|.|||||.|||||.||.||..|.|||||||||.
BL01271___fli    149 GAGCTGT--ATCACCTGAGAAAAAAGATGAGATTATTCAGGAATTTCATG    196

BSNT_02645___    197 ATATAGCCATTGCGCAAGATTATATTTCTCAAGGCGG-----TTTAAGCT    241
                     |.|..||.|||||.|||||.|||||||||||||||||     .|||.|| 
BL01271___fli    197 AAACGGCTATTGCTCAAGAATATATTTCTCAAGGCGGCATTCATTACGC-    245

BSNT_02645___    242 ATGCAAGACAAGTTCTGGAAAAGGCGCTTGGAGAGGATAAGGCGGAGAAC    291
                        |||| ||.||.||.||.||.|||||.||.||.||.||.||.|..|.|
BL01271___fli    246 ---CAAG-CAGGTGCTTGACAAAGCGCTCGGCGAAGACAAAGCCGCCAGC    291

BSNT_02645___    292 ATTCTAAACAGGCTGACTTCTTCTTTGCAGGTTAAACCATTTGATTTTGC    341
                     |||.|.|||||||||||.||.|||.|.||.||.|.|||.||.||||||||
BL01271___fli    292 ATTATCAACAGGCTGACATCGTCTCTTCAAGTCAGACCGTTCGATTTTGC    341

BSNT_02645___    342 CAGAAAAGCGGAGCCAGAACAAATTTTGAATTTTATCCAGCAAGAGCATC    391
                     ||||||||||||.||.||.||.|||.||||.|||||||||||.|||||.|
BL01271___fli    342 CAGAAAAGCGGATCCCGAGCAGATTCTGAACTTTATCCAGCATGAGCACC    391

BSNT_02645___    392 CGCAGACGATGGCGTTAATCTTGTCTTATTTAGATCCAGTGCAGGCCGGG    441
                     ||||||||||.||.||.||..||||||||.|.|||||.|||||..|.||.
BL01271___fli    392 CGCAGACGATCGCATTGATTCTGTCTTATCTCGATCCCGTGCAATCGGGT    441

BSNT_02645___    442 CAAATTTTATCCGAGCTGAACCCTGAAGTGCAGGCTGAGGTTGCGAGAAG    491
                     ||.||.||.||.||||||||.|..||.||||||||.||||||||.|||||
BL01271___fli    442 CAGATATTGTCAGAGCTGAATCAGGATGTGCAGGCAGAGGTTGCAAGAAG    491

BSNT_02645___    492 AATCGCGGTCATGGATAGAACGTCTCCAGAAATAATTAACGAGGTAGAAC    541
                     .|||||.||.|||||.||.|||||.||.|||||.||.||.||.||.||||
BL01271___fli    492 GATCGCTGTTATGGACAGGACGTCGCCGGAAATCATCAATGAAGTCGAAC    541

BSNT_02645___    542 GGATTCTGGAACAAAAATTATCTTCTGCATTTACTCAGGATTATACACAA    591
                     .|||||||||.|||||..||||.||..||||.||||||||.||.||.||.
BL01271___fli    542 AGATTCTGGAGCAAAAGCTATCGTCCACATTCACTCAGGACTACACGCAG    591

BSNT_02645___    592 ACAGGCGGAATTGAAGCTGTTGTGGAAGTGTTAAACGGGGTAGACAGAGG    641
                     ||.|||||.||.|||||.||.||.||||||||.|||||.||.||||||||
BL01271___fli    592 ACCGGCGGTATCGAAGCCGTAGTCGAAGTGTTGAACGGAGTTGACAGAGG    641

BSNT_02645___    642 GACAGAGAAGACGATCTTGGATTCATTGGAAATTCAGGATCCCGATCTTG    691
                     .||.|||||.||||||.|.||..|..|.||||||||||||||.||.||||
BL01271___fli    642 TACGGAGAAAACGATCCTTGACGCCCTTGAAATTCAGGATCCTGAGCTTG    691

BSNT_02645___    692 CTGAAGAGATTAAAAAGCGGATGTTTGTCTTCGAAGATATTGTCACACTT    741
                     |.||.||||||||||||||||||||.|||||.||||||||.||.||.|||
BL01271___fli    692 CCGACGAGATTAAAAAGCGGATGTTCGTCTTTGAAGATATCGTTACGCTT    741

BSNT_02645___    742 GATAACCGTGCAATTCAGAGAGTCATTCGCGATGTTGAGAACGACGATTT    791
                     ||||||||.||.|||||.||.||.||.||||||||.||.|||||||||.|
BL01271___fli    742 GATAACCGCGCTATTCAAAGGGTTATCCGCGATGTGGAAAACGACGATCT    791

BSNT_02645___    792 GCTCCTTTCATTAAAGGTTGCAAGCGAGGAAGTCAAAGAAATTGTGTTCA    841
                     |||.|||||..|.||.||.||.|||||.||.||||||||.||.||.||||
BL01271___fli    792 GCTTCTTTCTCTCAAAGTGGCCAGCGAAGAGGTCAAAGACATCGTCTTCA    841

BSNT_02645___    842 ACAATATGTCACAGCGTATGGTTGAAACCTTCAAAGAAGAAATGGAATTT    891
                     .|||.|||||.||||||||||.||||||.||.|||||.|||||||||||.
BL01271___fli    842 GCAACATGTCGCAGCGTATGGCTGAAACATTTAAAGAGGAAATGGAATTC    891

BSNT_02645___    892 ATGGGCCCTGTACGCTTGAAAGATGTAGAAGAAGCACAATCGAGAATTGT    941
                     |||||||||||.||..||...||.|||||||||||.|||||||||||.||
BL01271___fli    892 ATGGGCCCTGTGCGTCTGCGTGACGTAGAAGAAGCTCAATCGAGAATCGT    941

BSNT_02645___    942 AAGCATCGTCAGAAAGCTTGAAGAAGCCGGTGAAATTGTGATAGCAAGAG    991
                     ||||.||.||.|||..|||||||||||.|||||.||.||.||.||.||||
BL01271___fli    942 AAGCGTCATCCGAAGACTTGAAGAAGCAGGTGAGATCGTAATCGCCAGAG    991

BSNT_02645___    992 GCGGAGGGGATGATATTATTGTCTAA   1017
                     |||||||.||||||||.|||||||||
BL01271___fli    992 GCGGAGGAGATGATATCATTGTCTAA   1017


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