Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02647 and BL01269
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02647___fliI.1.5803.seq
# -bsequence dna-align/BL01269___fliI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02647___fliI-BL01269___fliI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02647___fliI-BL01269___fliI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02647___fliI
# 2: BL01269___fliI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1344
# Identity: 1006/1344 (74.9%)
# Similarity: 1006/1344 (74.9%)
# Gaps: 57/1344 ( 4.2%)
# Score: 3668.5
#
#
#=======================================
BSNT_02647___ 1 ATG---AAGACACAGAGTCTGATAGATTGTATAGAAATGACAGACTCGTA 47
||| ||| ||| |||.|.||.||||||||||...||||.||.||
BL01269___fli 1 ATGCTCAAG---CAG---CTGCTTGAATGTATAGAAACCGCAGATTCCTA 44
BSNT_02647___ 48 TAAACGGTACGGAAAAGTCAA----GCGGGTAATCGGCCTGATGATTGAA 93
.|||||.|||||||||||||| |||| |||||||||||||||||
BL01269___fli 45 CAAACGATACGGAAAAGTCAAACAGGCGG----TCGGCCTGATGATTGAA 90
BSNT_02647___ 94 TCAAAAGGGCCAGCAAGCTCAATTGGCGACGTGTGCCTGATTTATGCAAA 143
||.|||||.||.|.|.|.|||||.|||||.||.|||...||.|||.||||
BL01269___fli 91 TCCAAAGGACCTGAATGTTCAATCGGCGATGTCTGCAAAATCTATACAAA 140
BSNT_02647___ 144 AG--GACAATCTGGG--AAAGTC-ATTAAAGCTGAGGTAGTCGGCTTCCA 188
|| ||| ||| ||||.| |||||||||||.||.|||||||||.|
BL01269___fli 141 AGGTGAC-----GGGCCAAAGGCTATTAAAGCTGAAGTTGTCGGCTTCAA 185
BSNT_02647___ 189 GGAAGAAAATATTTTGCTTATGCCTTATTTAGAGGCTGCGAGCATTGCAC 238
.||..||||||||.|.||.|||||.|||||.||.||.||.|..|||||.|
BL01269___fli 186 AGACCAAAATATTCTTCTGATGCCATATTTGGAAGCGGCCAATATTGCCC 235
BSNT_02647___ 239 CTGGCAGCATTGTAGAAGCTACTGGGGAATCACTTCGGGTTAAAGTTGGG 288
|.|||||||||||.|||||.||.||.|||||.|||.||||.|||||.||.
BL01269___fli 236 CCGGCAGCATTGTCGAAGCGACGGGCGAATCGCTTAGGGTCAAAGTCGGC 285
BSNT_02647___ 289 ACCGGACTGATCGGACAAGTCATCGATGCTTTTGGAGAACCGCTTGACGG 338
.||||..|||||||||||||..|||||||.||.||..|.|||||.|||||
BL01269___fli 286 TCCGGGTTGATCGGACAAGTTGTCGATGCATTCGGCAATCCGCTCGACGG 335
BSNT_02647___ 339 AAAGC-TTCTGCCGAAAGGGCTTTCGCCTGTATCAACGGAGCAATCACCG 387
.||| |.||.||||||||.||..|.|..|||||.||.||.||..|.|||
BL01269___fli 336 -CAGCGTGCTTCCGAAAGGTCTGGCTCAAGTATCGACAGACCAGGCGCCG 384
BSNT_02647___ 388 CCCAACCCGATGAAACGGCCGCCTATCCGTGAAAAGATGGGTGTTGGAGT 437
||.||.|||||||||.|||||||.|||.|.|||||.||||..||.||.||
BL01269___fli 385 CCTAATCCGATGAAAAGGCCGCCGATCAGAGAAAAAATGGCGGTCGGCGT 434
BSNT_02647___ 438 CAGATCAATTGACAGCTTGCTGACAGTCGGTAAAGGCCAGCGGATTGGAA 487
||||||.||.|||||..|||||||.|||||.|||||.|||||..|.||.|
BL01269___fli 435 CAGATCGATCGACAGTCTGCTGACCGTCGGAAAAGGACAGCGTGTCGGGA 484
BSNT_02647___ 488 TTTTTGCAGGAAGCGGTGTTGGAAAAAGCAC-CTTAATGGGGATGATCGC 536
|.||.||.||||||||.||.||||||||||| ||| |||||.|||||.||
BL01269___fli 485 TATTCGCCGGAAGCGGCGTCGGAAAAAGCACGCTT-ATGGGAATGATTGC 533
BSNT_02647___ 537 CA-AGCAGACAGAGGCTGACTTAAACGTCATTGCACTTGTCGGAGAACGC 585
.| || ||||.|..||.|||||.||.|||||.||.|||||||||||.||.
BL01269___fli 534 GAGAG-AGACGGCCGCAGACTTGAATGTCATCGCTCTTGTCGGAGAGCGG 582
BSNT_02647___ 586 GGACGAGAGGTTCGGGAGTTTATTGAAAAAGATCTGGGGAAAGAGGGGCT 635
||.||.||.||..|||||||.||.||.||||||||.||..||||.|||||
BL01269___fli 583 GGCCGGGAAGTCAGGGAGTTCATAGAGAAAGATCTCGGCGAAGAAGGGCT 632
BSNT_02647___ 636 GAAACGATCGATTGTAGTCGTTGCCACCTCAGACCAGCCAGCATTAATGA 685
|||.|||.||||.||.||.||.||.||.||.||||||||.||..|.|||.
BL01269___fli 633 GAAGCGAACGATCGTTGTAGTGGCTACATCTGACCAGCCGGCGCTGATGC 682
BSNT_02647___ 686 GATTGAAAGCGGCATATACAGCGACTGCCATTGCCGAGTATTTCCGAGAT 735
|..||||||||||.||||||||.||.||.|||||||||||.|||||.||.
BL01269___fli 683 GTCTGAAAGCGGCCTATACAGCAACAGCGATTGCCGAGTACTTCCGCGAC 732
BSNT_02647___ 736 AAAGGCCAAAATGTCATGTTTATGATGGATTCTGTTACAAGGGTGGCAAT 785
|||||.|||||.||||||||.||||||||.||.||.||||||||.||.||
BL01269___fli 733 AAAGGACAAAACGTCATGTTCATGATGGACTCGGTGACAAGGGTCGCCAT 782
BSNT_02647___ 786 GGCGCAGCGAGAGATTGGACTGGCTGCAGGAGAGCCTCCGACGACAAAAG 835
|||.|||.|.||.||.||.|||||..|.||.||.||.|||||||||||||
BL01269___fli 783 GGCCCAGAGGGAAATCGGCCTGGCGACGGGCGAACCGCCGACGACAAAAG 832
BSNT_02647___ 836 GTTATACACCTTCAGTGTTCGCTATTTTACCTCGTTTACTAGAACGAACA 885
||||||||||.|||||||||||||||||||||....|..|||||||||||
BL01269___fli 833 GTTATACACCCTCAGTGTTCGCTATTTTACCTAAGCTCTTAGAACGAACA 882
BSNT_02647___ 886 GGTGCAAACGAGCATGGAA-------CCATTACGGCATTTTATACAGTGT 928
|| |||| |.|||| |.||.||.||.||.|||||.||..
BL01269___fli 883 GG----AACG---ACGGAAAGCGGGTCAATAACTGCTTTCTATACGGTTC 925
BSNT_02647___ 929 TGGTAGACGGGGATGACATGAATGAGCCGATTGCCGATACTGTACGCGGA 978
|.||.|||||.|||||.||||||||.|||||.||||||||||||.|.|||
BL01269___fli 926 TTGTCGACGGCGATGATATGAATGAACCGATCGCCGATACTGTAAGGGGA 975
BSNT_02647___ 979 ATTTTAGACGGACATATTGTGTTGGACAGGGCGCTTGCCAATAAAGGCCA 1028
||.||.|||||.|||||.||..|.|||.|.||.|||||.|||||||||||
BL01269___fli 976 ATCTTGGACGGCCATATCGTTCTTGACCGAGCCCTTGCGAATAAAGGCCA 1025
BSNT_02647___ 1029 GTTTCCTGCAGTTAACGTACTAAAAAGCATCAGCAGGGTGATGTCAAACA 1078
||||||.|||||.|||.|..|||||||||||||||||||||||||.||||
BL01269___fli 1026 GTTTCCGGCAGTCAACATTTTAAAAAGCATCAGCAGGGTGATGTCGAACA 1075
BSNT_02647___ 1079 TTTCAACAAAACAGCATCTGGAT----GCGGCAAATAAATTCCGTGAACT 1124
|..|....|||.|.||| || ||.||.||....|||.|.|||.|
BL01269___fli 1076 TCGCCGAGAAAGACCAT----ATCAGAGCAGCGAACCGGTTCAGGGAAAT 1121
BSNT_02647___ 1125 TTTATCGACATATCAAAATTCGGAAGATCTCATTAATATCGGAGCTTACA 1174
..|.||.||.||||||||.||.||.|||||.||.||.||.|||||.||.|
BL01269___fli 1122 GCTGTCAACCTATCAAAACTCAGAGGATCTGATCAACATAGGAGCCTATA 1171
BSNT_02647___ 1175 AAAGAGGATCATCCAGAGAAATTGATGAAGCGATACAATTTTATCCGCAG 1224
|||.|||.||.|||||||||||||||||.||.||||||||..|.||..||
BL01269___fli 1172 AAAAAGGGTCTTCCAGAGAAATTGATGAGGCCATACAATTCCACCCTAAG 1221
BSNT_02647___ 1225 CTTATTCA-ATTTTTAAAGCAGGGAACAGACGAACCGGCTTTATTGGAAG 1273
||.| ||| .||..|.|||||||.|...||.|||.||||.|...||||||
BL01269___fli 1222 CTGA-TCAGCTTCCTCAAGCAGGAAGTGGATGAAGCGGCATCGCTGGAAG 1270
BSNT_02647___ 1274 AAAGCATTGCTGTATTAACTAGTTTGACAGGAAATGAGGAATAA 1317
|.||||||.|..||||||..|||.|.|||||||..|||||.|||
BL01269___fli 1271 AGAGCATTTCCTTATTAAAGAGTCTTACAGGAAGAGAGGATTAA 1314
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