Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02649 and BL01268
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02649___fliJ.1.5803.seq
# -bsequence dna-align/BL01268___fliJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02649___fliJ-BL01268___fliJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02649___fliJ-BL01268___fliJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02649___fliJ
# 2: BL01268___fliJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 342/454 (75.3%)
# Similarity: 342/454 (75.3%)
# Gaps: 20/454 ( 4.4%)
# Score: 1294.0
#
#
#=======================================
BSNT_02649___ 1 GTGGCTTATCAATTTAGATTCCAAAAGCTGCTGGAACTAAAAGAAAATGA 50
.||||||||..|||||.|||.||||||||.||.||.||.|||||||||||
BL01268___fli 1 ATGGCTTATTCATTTAAATTTCAAAAGCTCCTCGAGCTTAAAGAAAATGA 50
BSNT_02649___ 51 AAAAGACCAATCCTTATCCGAGTATCAGCAATCAGTTTCTGAATTTGAAA 100
||||||||||||.||..|.||.||||||||.||||||||.|||||.||||
BL01268___fli 51 AAAAGACCAATCATTTGCTGAATATCAGCACTCAGTTTCCGAATTCGAAA 100
BSNT_02649___ 101 ACGTTGCTGAAAAATTATATGAGAATATGAGCAAAAAGGAATTGCTGGAA 150
|.||.||.|||||..|.|||||.|..||||||.||||.|||..|||||||
BL01268___fli 101 AGGTCGCGGAAAAGCTGTATGAAAGCATGAGCCAAAAAGAAACGCTGGAA 150
BSNT_02649___ 151 CAAAATAAGGAAAAGAAATTAAAAAGC-----GGCATGAGTGTACAAGAA 195
.||||.||| |||||.||.|.|| ||.|||||.||.||.|||
BL01268___fli 151 AAAAACAAG-----GAAATCAAGATGCAGACGGGGATGAGCGTTCAGGAA 195
BSNT_02649___ 196 ATGAGGCACTACCAACAATTTGTCTCAAATCTTGATAATACGATCTATCA 245
|||.||||.||.||.|||||||||.||||||||||.|..||.|||||.||
BL01268___fli 196 ATGCGGCATTATCAGCAATTTGTCACAAATCTTGAAACGACAATCTACCA 245
BSNT_02649___ 246 CTATCAAAAGCTTGTCATTATGAAAAGAAATCAAATGAATCAAAAACAAG 295
.|||||||||||.|||||.|||||.||||||.||||||||.|||||||..
BL01268___fli 246 TTATCAAAAGCTCGTCATGATGAAGAGAAATGAAATGAATGAAAAACAGC 295
BSNT_02649___ 296 AAATTTTGACAGAGAAAAACATTGAAGTGAAAAAGTTTGAAAAAATGCGT 345
|...||||||.||||||||.||.||..|||||||.||||||||||||...
BL01268___fli 296 ACGATTTGACGGAGAAAAATATCGAGCTGAAAAAATTTGAAAAAATGAAA 345
BSNT_02649___ 346 GAAAAACAGTTTAAAATGTTTGCTCTTGAAGATAAAGCTGCAGAAATG-- 393
|||||.||||||.||||||.|.|.||..||.|.||||| |||||
BL01268___fli 346 GAAAAGCAGTTTGAAATGTATTCGCTGCAAAACAAAGC-----AAATGAG 390
BSNT_02649___ 394 ---AAAGAAATGGACGATATTTCGATTAAGCAGTTTATGATTCAAGGCCA 440
||.||||||||||||||.||.|||...||||..||.|.||||||...
BL01268___fli 391 TTAAAGGAAATGGACGATATCTCCATTGCCCAGTACATAACTCAAGGAAG 440
BSNT_02649___ 441 TTAG 444
.|||
BL01268___fli 441 CTAG 444
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