Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02655 and BL01265

See Amino acid alignment / Visit BSNT_02655 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_02655___flgD.1.5803.seq
#    -bsequence dna-align/BL01265___flgD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02655___flgD-BL01265___flgD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02655___flgD-BL01265___flgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02655___flgD
# 2: BL01265___flgD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity:     299/495 (60.4%)
# Similarity:   299/495 (60.4%)
# Gaps:          99/495 (20.0%)
# Score: 791.5
# 
#
#=======================================

BSNT_02655___      1 ATGACTTCT-ATAAGTTCAGAAT--ATA----AACTGCCT--GAAAAAAC     41
                     |||   ||| || |.|||  |||  |||    |||.||||  |.||.|||
BL01265___flg      1 ATG---TCTGAT-ACTTC--AATTGATACCAGAACCGCCTTAGGAACAAC     44

BSNT_02655___     42 GAACACTGTGTCGACGAACA------------------------------     61
                     .|||||....|||||| |||                              
BL01265___flg     45 AAACACGAAATCGACG-ACATCCGATTTTTTATCCGAGGCAAAAAAAGCC     93

BSNT_02655___     62 ---ACAGCAG--------------CTTGGGGAAAGACGAGTTTTTAAAAA     94
                        |.|||||              ||| |||||.||.||.|||||.|||.
BL01265___flg     94 GAGAAAGCAGGGAGCGGCTCCAATCTT-GGGAAGGATGAATTTTTGAAAC    142

BSNT_02655___     95 TATTAATGACTCAAGTTCAAAACCAAGATCCGCTT-AACCCGGTTGACGA    143
                     |..|.||||..|||.|.||..|||||||||| ||| ||.|||.|.||.||
BL01265___flg    143 TGCTGATGAAACAACTGCAGTACCAAGATCC-CTTAAATCCGATGGAAGA    191

BSNT_02655___    144 TAAAGAATTTATCAGC-CAGATGGCGACTTTTTCAAGCTTGGAGCAAATG    192
                     ....|||||.|| .|| ||.||||||||.|||||||||.|.|||||..|.
BL01265___flg    192 CCGCGAATTCAT-TGCGCAAATGGCGACCTTTTCAAGCCTAGAGCAGCTA    240

BSNT_02655___    193 ATGAATCTGAATACGACAATGACTCAA--TTCGTTGAAAACCAAGATCCG    240
                     |.|||||||||.||.||.|||  ||.|  |||||.|.|...||.||.|||
BL01265___flg    241 ACGAATCTGAACACAACGATG--TCGACGTTCGTCGGACTTCAGGACCCG    288

BSNT_02655___    241 TTTACAACGTATGTTGATTGGATGGGAAAAGAAGT-ATCTTGGACTGATG    289
                     .|.||.|.||||||....|||||.||||||||||| |.||    .|||.|
BL01265___flg    289 ATGACGATGTATGTCAGCTGGATCGGAAAAGAAGTCACCT----ATGAAG    334

BSNT_02655___    290 G-TAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAA-CATT    337
                     | .||.|..||.| |||.||||| |||       |||| ||.||| ||.|
BL01265___flg    335 GCGAAGACAGCGA-AGAAAAAAC-GGC-------GCTC-GTCAAATCAGT    374

BSNT_02655___    338 TTAAA--------GGAAATTATTATCTCGTTCTTGATGATGGGACCGAGA    379
                     |.|||        |||.|.|||...||.||.|||||.|||||.|||||..
BL01265___flg    375 TAAAAGCTCAGACGGACAGTATCTGCTTGTCCTTGACGATGGAACCGAAG    424

BSNT_02655___    380 TCAGTCC-TGCGAATGTCATGTCTGTGGGACAATCATCTAAATAA    423
                     |||.||| || ||||||.|.|.|.||..|.||.||...|||||||
BL01265___flg    425 TCAATCCGTG-GAATGTGACGGCGGTAAGCCATTCTGATAAATAA    468


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