Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02655 and BL01265
See
Amino acid alignment /
Visit
BSNT_02655 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02655___flgD.1.5803.seq
# -bsequence dna-align/BL01265___flgD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02655___flgD-BL01265___flgD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02655___flgD-BL01265___flgD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02655___flgD
# 2: BL01265___flgD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 299/495 (60.4%)
# Similarity: 299/495 (60.4%)
# Gaps: 99/495 (20.0%)
# Score: 791.5
#
#
#=======================================
BSNT_02655___ 1 ATGACTTCT-ATAAGTTCAGAAT--ATA----AACTGCCT--GAAAAAAC 41
||| ||| || |.||| ||| ||| |||.|||| |.||.|||
BL01265___flg 1 ATG---TCTGAT-ACTTC--AATTGATACCAGAACCGCCTTAGGAACAAC 44
BSNT_02655___ 42 GAACACTGTGTCGACGAACA------------------------------ 61
.|||||....|||||| |||
BL01265___flg 45 AAACACGAAATCGACG-ACATCCGATTTTTTATCCGAGGCAAAAAAAGCC 93
BSNT_02655___ 62 ---ACAGCAG--------------CTTGGGGAAAGACGAGTTTTTAAAAA 94
|.||||| ||| |||||.||.||.|||||.|||.
BL01265___flg 94 GAGAAAGCAGGGAGCGGCTCCAATCTT-GGGAAGGATGAATTTTTGAAAC 142
BSNT_02655___ 95 TATTAATGACTCAAGTTCAAAACCAAGATCCGCTT-AACCCGGTTGACGA 143
|..|.||||..|||.|.||..|||||||||| ||| ||.|||.|.||.||
BL01265___flg 143 TGCTGATGAAACAACTGCAGTACCAAGATCC-CTTAAATCCGATGGAAGA 191
BSNT_02655___ 144 TAAAGAATTTATCAGC-CAGATGGCGACTTTTTCAAGCTTGGAGCAAATG 192
....|||||.|| .|| ||.||||||||.|||||||||.|.|||||..|.
BL01265___flg 192 CCGCGAATTCAT-TGCGCAAATGGCGACCTTTTCAAGCCTAGAGCAGCTA 240
BSNT_02655___ 193 ATGAATCTGAATACGACAATGACTCAA--TTCGTTGAAAACCAAGATCCG 240
|.|||||||||.||.||.||| ||.| |||||.|.|...||.||.|||
BL01265___flg 241 ACGAATCTGAACACAACGATG--TCGACGTTCGTCGGACTTCAGGACCCG 288
BSNT_02655___ 241 TTTACAACGTATGTTGATTGGATGGGAAAAGAAGT-ATCTTGGACTGATG 289
.|.||.|.||||||....|||||.||||||||||| |.|| .|||.|
BL01265___flg 289 ATGACGATGTATGTCAGCTGGATCGGAAAAGAAGTCACCT----ATGAAG 334
BSNT_02655___ 290 G-TAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAA-CATT 337
| .||.|..||.| |||.||||| ||| |||| ||.||| ||.|
BL01265___flg 335 GCGAAGACAGCGA-AGAAAAAAC-GGC-------GCTC-GTCAAATCAGT 374
BSNT_02655___ 338 TTAAA--------GGAAATTATTATCTCGTTCTTGATGATGGGACCGAGA 379
|.||| |||.|.|||...||.||.|||||.|||||.|||||..
BL01265___flg 375 TAAAAGCTCAGACGGACAGTATCTGCTTGTCCTTGACGATGGAACCGAAG 424
BSNT_02655___ 380 TCAGTCC-TGCGAATGTCATGTCTGTGGGACAATCATCTAAATAA 423
|||.||| || ||||||.|.|.|.||..|.||.||...|||||||
BL01265___flg 425 TCAATCCGTG-GAATGTGACGGCGGTAAGCCATTCTGATAAATAA 468
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.