Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02656 and BL01264

See Amino acid alignment / Visit BSNT_02656 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_02656___flgG.1.5803.seq
#    -bsequence dna-align/BL01264___flgG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02656___flgG-BL01264___flgG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02656___flgG-BL01264___flgG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02656___flgG
# 2: BL01264___flgG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 879
# Identity:     543/879 (61.8%)
# Similarity:   543/879 (61.8%)
# Gaps:         171/879 (19.5%)
# Score: 1580.0
# 
#
#=======================================

BSNT_02656___      1 ATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAGAACTTTCAAAC     50
                     ||||||||||||||.||.||.|||||||||||.|||||.||||||||.||
BL01264___flg      1 ATGTTACGTTCACTATACTCAGGAATCAGCGGCATGAAAAACTTTCAGAC     50

BSNT_02656___     51 AAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGAT    100
                     |||||||||.||..|||..||||||||..|.||..|.|||||.|.|||.|
BL01264___flg     51 AAAGCTTGATGTCGTCGCCAACAACATCTCGAATATCAATACGGCAGGCT    100

BSNT_02656___    101 TCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTAAGCCAAACGATTGCC    150
                     ..||.||.|||||.||.||.|||||||||||.||.|||||...|.||.||
BL01264___flg    101 ATAAGAAAAGCCGGGTTACGTTTAAAGATATTGTCAGCCAGCAGCTTTCC    150

BSNT_02656___    151 GGCG-GT--TCTGCTGCTGGTGCAACAATCGGCGGAAC---AAACTCTAA    194
                     |||| ||  ||..||.|||      |||.|.||||..|   ||||....|
BL01264___flg    151 GGCGCGTCGTCGTCTACTG------CAAACCGCGGCTCTGTAAACGGCCA    194

BSNT_02656___    195 GCAAATCGGTTTAGGTTCATC-ATCTGGCACAATTGATACAATTCATTCA    243
                     |||..||||..|.|||.||.| ||| ||..|.||.||||    |||||||
BL01264___flg    195 GCAGGTCGGACTCGGTGCAACGATC-GGATCGATCGATA----TCATTCA    239

BSNT_02656___    244 -ACAAGCG---------CGACACAAAGCACAGGAAGAACA-CTTGATTTA    282
                      ||||.||         |||||      |||||..| .|| |||||..|.
BL01264___flg    240 CACAAACGCAGCGCCTTCGACA------ACAGGCCG-CCAGCTTGACATG    282

BSNT_02656___    283 GCAATTGAC-GGCGACGGTTACTTCCGAAT-TGATACAGGTGACG----G    326
                     .|.||| || ||.|||||.||||||||..| .||| ||||.||.|    |
BL01264___flg    283 ACCATT-ACAGGAGACGGCTACTTCCGCGTCGGAT-CAGGAGATGAAGTG    330

BSNT_02656___    327 GACAGCTTATACAAGAGCAGGGAACTTCTATTTAGATAATACCG------    370
                     .||    ||.||||||.||||.||||||           |||||      
BL01264___flg    331 TAC----TACACAAGATCAGGAAACTTC-----------TACCGATCTGA    365

BSNT_02656___    371 -GAA-----------CACTGGTTACAGG-TGATGGCTACCATGTGTTA--    405
                      |||           |||||.|.||.|| ||.|        .||.|||  
BL01264___flg    366 TGAAGGTGACCTCGTCACTGTTGACGGGCTGTT--------CGTCTTAAC    407

BSNT_02656___    406 ----AATATGAATGGGGGAACAATTAAAATTCCTACTGATGCTCAAAGCT    451
                         |||   |||   ||||.|||.||.|||||....||.||.|||||||
BL01264___flg    408 GGCCAAT---AAT---GGAAGAATCAACATTCCGCAAGACGCGCAAAGCT    451

BSNT_02656___    452 TTAGCATTGGTTCTGATGGAAAGGTGTCAATTGTTGATGCTGAGGGGAAA    501
                     |.|||||.|.|.||||.||||..||.||...|||.|||        .|||
BL01264___flg    452 TCAGCATCGCTCCTGACGGAACCGTTTCTTATGTCGAT--------CAAA    493

BSNT_02656___    502 AC-------ACAAGA-CGGGGGACAAATCGGGATTGTTACTTTTGCCAAC    543
                     ||       ||.||| ||..||.||.|||..|.|||..||.||...||||
BL01264___flg    494 ACAACGAGAACCAGACCGCCGGCCAGATCTCGCTTGCGACATTCAGCAAC    543

BSNT_02656___    544 AGTGAT--GGATTGGAT-AAAATCGGAAGA-AACCTATACCGTGAATCTT    589
                     |  .||  |||||  || ||||.|.|.||| |||||.|||||.|||.|.|
BL01264___flg    544 A--CATCCGGATT--ATCAAAAGCTGGAGACAACCTTTACCGCGAAACAT    589

BSNT_02656___    590 TAAACTCTG--GAACGGCCAG----TGCAGCGAACCAGCCTGGTGACGGC    633
                     |.|..||.|  ||.|.||.||    ||.|         |||||.||.|||
BL01264___flg    590 TGAGTTCGGGAGATCCGCAAGTCGTTGTA---------CCTGGGGAAGGC    630

BSNT_02656___    634 GG---------------AACTGGTGCTCTTAAATCAGGATTTCTCGAAAT    668
                     ||               |||..||||.|||               |||||
BL01264___flg    631 GGCTCAGGAAAAATTCAAACGAGTGCGCTT---------------GAAAT    665

BSNT_02656___    669 GTCTAACGTCGA--TTTAACTGACGAATTTACTGAAATGATCGTAGCCCA    716
                     |||.||||||||  |||  |.||.||||||.|.||||||||..|.||.||
BL01264___flg    666 GTCGAACGTCGACCTTT--CAGAAGAATTTTCCGAAATGATTATCGCGCA    713

BSNT_02656___    717 GCGCGGATTCCAATCAAACTCAAAAATTATTACAACATCTGATGAAATCC    766
                     ||||||.|||||.||.||..|.|||||.||||||||.|||||||||||.|
BL01264___flg    714 GCGCGGCTTCCAGTCCAATGCGAAAATCATTACAACCTCTGATGAAATTC    763

BSNT_02656___    767 TTCAAGAACTGGTTAACCTTAAACGTTAA    795
                     ||||.|||||.||.||.||.||.||.||.
BL01264___flg    764 TTCAGGAACTCGTCAATCTGAAGCGATAG    792


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02656 and BL01264

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
