Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02659 and BL01263
See
Amino acid alignment /
Visit
BSNT_02659 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02659___fliL.1.5803.seq
# -bsequence dna-align/BL01263___fliL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02659___fliL-BL01263___fliL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02659___fliL-BL01263___fliL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02659___fliL
# 2: BL01263___fliL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity: 297/467 (63.6%)
# Similarity: 297/467 (63.6%)
# Gaps: 79/467 (16.9%)
# Score: 901.0
#
#
#=======================================
BSNT_02659___ 1 ATGAAGAAAAAGTT------AATGATCAT----ATTACTAATTATTCTTA 40
|||||.|||||..| |||.||.|| |||| ||.
BL01263___fli 1 ATGAATAAAAAACTTCTAGGAATTATGATGACGATTA----------TTT 40
BSNT_02659___ 41 TCGTAATTGGTGCTCTCGGG----GCGGCGGCTTATTTTGTTTTAGGCGG 86
|.|.|||||.|| |.|.||| ||.||| ||.|||
BL01263___fli 41 TGGCAATTGCTG-TGTTGGGAACCGCTGCG-------TTCTTT------- 75
BSNT_02659___ 87 AAAGTCCGAAAAAAGTGAAGCGAA----AAAAAG---------------- 116
||| |..|||.||||||.| ||||||
BL01263___fli 76 ---GTC---ATCAAGGGAAGCGCAAGTGAAAAAGATCAAAACGCAGAACC 119
BSNT_02659___ 117 ---TATTGATGAAATCGTTGCGTCTTCTGTTGATGTAGAAGAGATCACAA 163
.||.||||||.|.||.|..|||||.|||||.||.|..||.|||||.|
BL01263___fli 120 TTCGATCGATGAAGTGGTCGAATCTTCAGTTGAAGTCGCCGAAATCACGA 169
BSNT_02659___ 164 CAAATTTAAAGTCTGATAACATTATCCGTCTTG-CTATTAAGCTTGAAAC 212
||||.||.||.||.||.||..|..||||| ||| |.||.|||||||||||
BL01263___fli 170 CAAACTTGAAATCAGACAATGTAGTCCGT-TTGTCAATCAAGCTTGAAAC 218
BSNT_02659___ 213 TGATTCTGATA-AATCAAAAGAAGAACTTGAGAAACGTGATTTCCAAGTG 261
.||||| ||.| |..|.||||||||.|||||.||.||.|||||||||.|.
BL01263___fli 219 CGATTC-GAAAGAGGCGAAAGAAGAGCTTGAAAAGCGGGATTTCCAAATT 267
BSNT_02659___ 262 AAAGACGCTGTTATATCACTGCTTGCTGATACGAATGCTGATCAGATTGA 311
|||||..|.||.||.||.||..|.||..|.|||||.||.|||.||.||||
BL01263___fli 268 AAAGATTCAGTCATCTCCCTTTTGGCGAACACGAACGCAGATGAGCTTGA 317
BSNT_02659___ 312 GGGAGACAAGGGAAAAGAAACCTTT-AAGAAGGAACTGAAAGATAAAATA 360
.|||.|.||.||||||||||..||| ||||| .|.||||||||.||..|.
BL01263___fli 318 AGGACAAAAAGGAAAAGAAAAATTTAAAGAA-CAGCTGAAAGAAAAGCTG 366
BSNT_02659___ 361 AA---TAGCTACCTCCAAGAAGGAAAAGTAGAAAA-AGTGTATATTACCT 406
|| .|.||||.|..||||.|||||||| ||||| .|||||.|||||||
BL01263___fli 367 AACACGAACTACATGAAAGAGGGAAAAGT-GAAAACTGTGTACATTACCT 415
BSNT_02659___ 407 CCTTTAATCTGCAATAA 423
|||||||||||||.||.
BL01263___fli 416 CCTTTAATCTGCAGTAG 432
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.