Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02659 and BL01263

See Amino acid alignment / Visit BSNT_02659 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_02659___fliL.1.5803.seq
#    -bsequence dna-align/BL01263___fliL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02659___fliL-BL01263___fliL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02659___fliL-BL01263___fliL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02659___fliL
# 2: BL01263___fliL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity:     297/467 (63.6%)
# Similarity:   297/467 (63.6%)
# Gaps:          79/467 (16.9%)
# Score: 901.0
# 
#
#=======================================

BSNT_02659___      1 ATGAAGAAAAAGTT------AATGATCAT----ATTACTAATTATTCTTA     40
                     |||||.|||||..|      |||.||.||    ||||          ||.
BL01263___fli      1 ATGAATAAAAAACTTCTAGGAATTATGATGACGATTA----------TTT     40

BSNT_02659___     41 TCGTAATTGGTGCTCTCGGG----GCGGCGGCTTATTTTGTTTTAGGCGG     86
                     |.|.|||||.|| |.|.|||    ||.|||       ||.|||       
BL01263___fli     41 TGGCAATTGCTG-TGTTGGGAACCGCTGCG-------TTCTTT-------     75

BSNT_02659___     87 AAAGTCCGAAAAAAGTGAAGCGAA----AAAAAG----------------    116
                        |||   |..|||.||||||.|    ||||||                
BL01263___fli     76 ---GTC---ATCAAGGGAAGCGCAAGTGAAAAAGATCAAAACGCAGAACC    119

BSNT_02659___    117 ---TATTGATGAAATCGTTGCGTCTTCTGTTGATGTAGAAGAGATCACAA    163
                        .||.||||||.|.||.|..|||||.|||||.||.|..||.|||||.|
BL01263___fli    120 TTCGATCGATGAAGTGGTCGAATCTTCAGTTGAAGTCGCCGAAATCACGA    169

BSNT_02659___    164 CAAATTTAAAGTCTGATAACATTATCCGTCTTG-CTATTAAGCTTGAAAC    212
                     ||||.||.||.||.||.||..|..||||| ||| |.||.|||||||||||
BL01263___fli    170 CAAACTTGAAATCAGACAATGTAGTCCGT-TTGTCAATCAAGCTTGAAAC    218

BSNT_02659___    213 TGATTCTGATA-AATCAAAAGAAGAACTTGAGAAACGTGATTTCCAAGTG    261
                     .||||| ||.| |..|.||||||||.|||||.||.||.|||||||||.|.
BL01263___fli    219 CGATTC-GAAAGAGGCGAAAGAAGAGCTTGAAAAGCGGGATTTCCAAATT    267

BSNT_02659___    262 AAAGACGCTGTTATATCACTGCTTGCTGATACGAATGCTGATCAGATTGA    311
                     |||||..|.||.||.||.||..|.||..|.|||||.||.|||.||.||||
BL01263___fli    268 AAAGATTCAGTCATCTCCCTTTTGGCGAACACGAACGCAGATGAGCTTGA    317

BSNT_02659___    312 GGGAGACAAGGGAAAAGAAACCTTT-AAGAAGGAACTGAAAGATAAAATA    360
                     .|||.|.||.||||||||||..||| ||||| .|.||||||||.||..|.
BL01263___fli    318 AGGACAAAAAGGAAAAGAAAAATTTAAAGAA-CAGCTGAAAGAAAAGCTG    366

BSNT_02659___    361 AA---TAGCTACCTCCAAGAAGGAAAAGTAGAAAA-AGTGTATATTACCT    406
                     ||   .|.||||.|..||||.|||||||| ||||| .|||||.|||||||
BL01263___fli    367 AACACGAACTACATGAAAGAGGGAAAAGT-GAAAACTGTGTACATTACCT    415

BSNT_02659___    407 CCTTTAATCTGCAATAA    423
                     |||||||||||||.||.
BL01263___fli    416 CCTTTAATCTGCAGTAG    432


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