Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02661 and BL01262
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_02661___fliM.1.5803.seq
# -bsequence dna-align/BL01262___fliM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02661___fliM-BL01262___fliM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02661___fliM-BL01262___fliM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02661___fliM
# 2: BL01262___fliM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1012
# Identity: 805/1012 (79.5%)
# Similarity: 805/1012 (79.5%)
# Gaps: 26/1012 ( 2.6%)
# Score: 3212.0
#
#
#=======================================
BSNT_02661___ 1 ATGTCAGGAGAAGTTCTCTCCCAAAATGAAATAGATGCACTGCTTTCTGC 50
|||.||||||||||.|||||||||||||||||.||||||||||||||.||
BL01262___fli 1 ATGGCAGGAGAAGTGCTCTCCCAAAATGAAATCGATGCACTGCTTTCAGC 50
BSNT_02661___ 51 AATATCAACAGGTGAAATGGACGCTGAAGAGCTGAAAAAAGAAGA----- 95
.|||||.||.||||||||||||||.||.|||||||||||||||||
BL01262___fli 51 GATATCGACCGGTGAAATGGACGCCGACGAGCTGAAAAAAGAAGAGTCCG 100
BSNT_02661___ 96 --AAAAGAGAAGAAAGTCAAGGTTTATGATTTCAAACGTGCGCTGCGGTT 143
||| |||||.||.||.|||||.||.|||||.|||||.||.||
BL01262___fli 101 TTAAA-------AAAGTAAAAGTCTATGACTTTAAACGGGCGCTCCGCTT 143
BSNT_02661___ 144 TTCTAAGGATCAGATCCGCAGTTTAACGAGAATTCATGACAATTTTGCAA 193
|||.||||||||.||||||||.||.||.||.|||||.||.||.|||||||
BL01262___fli 144 TTCAAAGGATCAAATCCGCAGCTTGACCAGGATTCACGATAACTTTGCAA 193
BSNT_02661___ 194 GACTTCTTACCACTCATTTTTCTGCTCAGCTCAGAACCTATATTCACATA 243
|.||.||.||.|||.||||.||.||||||.|.|||||||||||.||.||.
BL01262___fli 194 GGCTGCTAACGACTTATTTCTCAGCTCAGTTGAGAACCTATATCCAAATC 243
BSNT_02661___ 244 TCTGTCAGTTCTGTTGACCAGGTCCCGTATGAGGAATTTATCAGATCGAT 293
||.|||||.||.|||||.|||||.||||||||||||||.|||||||||||
BL01262___fli 244 TCGGTCAGCTCGGTTGATCAGGTTCCGTATGAGGAATTCATCAGATCGAT 293
BSNT_02661___ 294 CCCGAACATGACGATTCTGAATCTATTTGATGTCCATCCGATGGAAGGCA 343
.|||||.||||||||.||.|||||.|||||.||.|..||..|.|||||.|
BL01262___fli 294 TCCGAATATGACGATCCTCAATCTGTTTGAGGTTCGCCCTCTTGAAGGAA 343
BSNT_02661___ 344 GAATTATGATGGAGGTCAACCCCACGATAGCTTATACGATGATGGATCGG 393
||||.|||||||||.|||||||.||.||.||.||||||||||||||.|||
BL01262___fli 344 GAATCATGATGGAGATCAACCCGACCATCGCCTATACGATGATGGACCGG 393
BSNT_02661___ 394 GTCATGGGCGGGATTGGAATC-AGTCATAACAAGGTTGACAGTTTGACAG 442
||.|||||||||||.|| .|| ||.||.|||||..|||||||..||||.|
BL01262___fli 394 GTGATGGGCGGGATCGG-CTCGAGCCACAACAAAATTGACAGCATGACGG 442
BSNT_02661___ 443 AAATTGAAACAAAAATCATTTCTAATTTATTTGAAAATGCACTGGGT--- 489
|.|||||.||.||||||||.||.||||||||.|||| .|||..|
BL01262___fli 443 AGATTGAGACGAAAATCATGTCCAATTTATTCGAAA----GCTGTCTCAC 488
BSNT_02661___ 490 -AATTATAAAGAAGCTTGGCAGTCAATTGCTGATATTGAACCGGAAATGA 538
|||||.|||||.||.|||.|.||.||..|.||.||.||.|||||||||.
BL01262___fli 489 GAATTACAAAGATGCGTGGGAATCCATCACGGAAATCGAGCCGGAAATGT 538
BSNT_02661___ 539 CTGAGTTTGAAGTGAATCCGCAATTTGTTCAGATGGTATCTCCTAATGAA 588
|.||.|||||||||||||||||.|||||.||.||||||||.||.|||||.
BL01262___fli 539 CCGATTTTGAAGTGAATCCGCAGTTTGTGCAAATGGTATCGCCGAATGAG 588
BSNT_02661___ 589 ACAGTCGTGGTGATCTCGCTCAATACTCAAATTGGTGAAATCAGCGGTGT 638
||.|||||.||.||.|||||.||.||.|||||.||.||.||||||||.||
BL01262___fli 589 ACGGTCGTTGTCATTTCGCTGAACACGCAAATAGGAGACATCAGCGGGGT 638
BSNT_02661___ 639 CATTAATCTCTGTATCCCGCATATCGTACTCGAGCCGCTCATACCGAAGC 688
.||.||.||.||.||||||||..||||.||.||.|||.||||.||.||||
BL01262___fli 639 TATCAACCTGTGCATCCCGCACGTCGTCCTGGAACCGATCATTCCTAAGC 688
BSNT_02661___ 689 TTTCAGTCCACTATTGGATGCAATCAGACCGAAATGAGCCAAAGCCTGAG 738
||||.||.|||||.|||||||||||||||.|||.|||.|||||.||.|||
BL01262___fli 689 TTTCCGTTCACTACTGGATGCAATCAGACAGAATTGAACCAAAACCGGAG 738
BSNT_02661___ 739 GAAACAAAGTCGCTTGAAAAACGTATCATGACAGCACAAATACCTGTCGT 788
||||||||||||.|.|||||.||.||..||||.||.|||||.||..|.||
BL01262___fli 739 GAAACAAAGTCGATAGAAAAGCGGATTTTGACGGCGCAAATTCCAATTGT 788
BSNT_02661___ 789 GGCCGAGCTCGGCACATCTGAACTGACGATAGAAGAGTTTTTAAGTTTAG 838
.||.||.|||||..||||.|||.|.||.||.|||||||||||||.|||||
BL01262___fli 789 CGCAGAACTCGGATCATCGGAATTAACCATTGAAGAGTTTTTAAATTTAG 838
BSNT_02661___ 839 AAGTCGGAGACTGCATAACTTTGGACAAATCAGTCACGGATCCTCTTACT 888
||.|.|||||.||.||.|||||||||||||||||..|.||.|||||||||
BL01262___fli 839 AAATTGGAGATTGTATCACTTTGGACAAATCAGTAGCAGAACCTCTTACT 888
BSNT_02661___ 889 GTATTGGTCGGAGATAAGCCGAAATTTTTAGGACAAGCCGGCCGGGTGAA 938
||.||||||||||||||.|||||||||.|||.||||||||||||..||||
BL01262___fli 889 GTTTTGGTCGGAGATAAACCGAAATTTCTAGCACAAGCCGGCCGAATGAA 938
BSNT_02661___ 939 TCGAAA-ACAGGCAGTGCAAATTTTAGATCACGACATAAGAGGTGAACAA 987
|||||| || .||..|.||||||.|||||||||||||||||||||||.||
BL01262___fli 939 TCGAAAGAC-TGCGATTCAAATTCTAGATCACGACATAAGAGGTGAAGAA 987
BSNT_02661___ 988 GATGGAGAATAA 999
.|||||||||||
BL01262___fli 988 TATGGAGAATAA 999
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