Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02664 and BL01260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_02664___cheY.1.5803.seq
# -bsequence dna-align/BL01260___cheY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02664___cheY-BL01260___cheY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02664___cheY-BL01260___cheY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02664___cheY
# 2: BL01260___cheY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 296/365 (81.1%)
# Similarity: 296/365 (81.1%)
# Gaps: 4/365 ( 1.1%)
# Score: 1189.5
#
#
#=======================================
BSNT_02664___ 1 ATGGC--ACATAGAATTTTAATTGTAGATGACGCAGCATTTATGAGAATG 48
||||| ||| || ||||||.|.||.|||||.||||||||||||||||||
BL01260___che 1 ATGGCTTACA-AG-ATTTTAGTAGTTGATGATGCAGCATTTATGAGAATG 48
BSNT_02664___ 49 ATGATTAAAGATATTTTGGTTAAAAATGGTTTTGAAGTTGTGGCGGAAGC 98
||||||||||||||||||||.|||||.||.||||||||.||.||.|||||
BL01260___che 49 ATGATTAAAGATATTTTGGTGAAAAACGGCTTTGAAGTCGTCGCAGAAGC 98
BSNT_02664___ 99 TGAAAATGGAGCACAAGCGGTAGAGAAATATAAAGAGCATTCACCTGACC 148
..||.|.||.|||||.||.||.||.||.||||||||||||||||||||.|
BL01260___che 99 GCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATC 148
BSNT_02664___ 149 TTGTTACTATGGATATCACGATGCCAGAAATGGATGGTATTACAGCATTA 198
||||.||.|||||||||||||||||.||||..||.||.||.||.||..|.
BL01260___che 149 TTGTCACAATGGATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTT 198
BSNT_02664___ 199 AAAGAAATTAAACAAATTGATGCGCAGGCAAGAATCATCATGTGTTCTGC 248
||||||||.||..||||.|||.|||||||||.|||||||||||||||.||
BL01260___che 199 AAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATGTGTTCGGC 248
BSNT_02664___ 249 TATGGGACAGCAATCAATGGTTATTGATGCCATTCAGGCCGGCGCTAAGG 298
.|||||.||||||||.||||||||.||.|||||.|||||.||.||.||.|
BL01260___che 249 AATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAG 298
BSNT_02664___ 299 ATTTCATTGTGAAACCTTTCCAAGCTGACCGTGTGCTTGAAGCAATCAAC 348
|.||.||.||.|||||.|||||.||||||||.||..|.|||||.|||||.
BL01260___che 299 ACTTTATCGTCAAACCGTTCCAGGCTGACCGCGTCATGGAAGCCATCAAT 348
BSNT_02664___ 349 AAAACATTAAGTTAA 363
|||||..||||.|||
BL01260___che 349 AAAACGCTAAGCTAA 363
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