Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02665 and BL01259
See
Amino acid alignment /
Visit
BSNT_02665 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_02665___fliZ.1.5803.seq
# -bsequence dna-align/BL01259___fliZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02665___fliZ-BL01259___fliZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02665___fliZ-BL01259___fliZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02665___fliZ
# 2: BL01259___fliZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 737
# Identity: 458/737 (62.1%)
# Similarity: 458/737 (62.1%)
# Gaps: 139/737 (18.9%)
# Score: 1328.0
#
#
#=======================================
BSNT_02665___ 1 TTGAAAAAGAGTCAATATTTTATCGTTTTTA---------TTTGT----- 36
|||...|||| ||..|.||| ||||.| |||||
BL01259___fli 1 TTGTTTAAGA---AACCTCTTA---TTTTCATAGCCGGCCTTTGTCTATG 44
BSNT_02665___ 37 ----TTTTTCGTTTTATTCAGT---GTAC-ATCCGATTGCTGCT-GCCGC 77
|||.||| ||.| |||| .|||| ||| || ||.|.
BL01259___fli 45 CGCCTTTCTCG-------CATTGCCGTACGCTCCG---GCT-CTCGCAGA 83
BSNT_02665___ 78 GG-----------CAGACTC--TGATAATTCAACTGT------AAACGAA 108
|| ||||| | ||| |||.|||| || ||
BL01259___fli 84 GGAATCGGGGGACCAGAC-CGTTGA----TCATCTGTTTGAGCAA---AA 125
BSNT_02665___ 109 TGGT---TTCAAA-AGAAAGATGAAAAAACTGCAGATCAATCAGAGCAAA 154
.||| ..|||| |||||| |||| ||||||
BL01259___fli 126 AGGTGCGGGCAAAGAGAAAG-----AAAA---------------AGCAAA 155
BSNT_02665___ 155 AG--AAAGAAAAAACAAC-----AAAAACTGCT------GATGAGACGGA 191
|| |||||.||||| | |||||.|.|| ||.|||.||||
BL01259___fli 156 AGACAAAGACAAAAC--CGAGGAAAAAAGTTCTCTAAAGGAAGAGGCGGA 203
BSNT_02665___ 192 G---GGAGCGGCTGCTCCTTCTGTCTCAGCTTTTGATTTTGTAAAGATGA 238
| |.|.|..|..|||||||.||.||....|||||||||||.||.||||
BL01259___fli 204 GACCGAACCCCCGTCTCCTTCCGTTTCCATATTTGATTTTGTGAAAATGA 253
BSNT_02665___ 239 TTTTCGCTTTACTGTTTGTTATCGCGCTGATTTACGGGCTGGTTAAGCTC 288
|...|||.||||||||.||.||....|||||.||.|...||||.||..||
BL01259___fli 254 TCGGCGCGTTACTGTTCGTCATTTTTCTGATCTATGCTTTGGTCAAATTC 303
BSNT_02665___ 289 ATGAACAAAAGAAATCGGCTCCTAAAGCCTTTTCAATATGTTGAAAATAT 338
|||||.|||.|.||.||..|.|||||.||.||.||.|||||||||||.||
BL01259___fli 304 ATGAATAAACGCAACCGTTTGCTAAAACCCTTCCAGTATGTTGAAAACAT 353
BSNT_02665___ 339 TGGCGGCACATCGGTCGGCCAGAACAGATCCATACAATTGATCAAGGTCG 388
.|||||.||.||..||||.||.||||..|||.||||..||||.||.||.|
BL01259___fli 354 CGGCGGGACTTCACTCGGGCAAAACAAGTCCGTACAGCTGATTAAAGTAG 403
BSNT_02665___ 389 GGAAAAGTGTGCTCGTCGTCGGTGTAGGAGAGACGATCCAGCTGCTGAAA 438
|.||.||.|||||.|||||||||||.||.||.|..|||||||||||||||
BL01259___fli 404 GAAACAGGGTGCTGGTCGTCGGTGTCGGCGAAAATATCCAGCTGCTGAAA 453
BSNT_02665___ 439 GAAATTGAGGATGAAAAAGAGAT-TGAAGTCATTCTCAGTCAGCATGAAG 487
||.||.||.||||||||.|| || |.|||..|||||||..||||||||||
BL01259___fli 454 GAGATCGATGATGAAAAGGA-ATATAAAGAAATTCTCACGCAGCATGAAG 502
BSNT_02665___ 488 AGGCAATGTCAAGCAAAATAGAGTGGCA-AAAGTTTGTGAAGCCGCTTAA 536
..||.|||...|||||.||.||.||||| ||| || ||.| |.|.||
BL01259___fli 503 CTGCGATGAACAGCAAGATTGAATGGCAGAAA---TG-GATG--GATCAA 546
BSNT_02665___ 537 G----AGTTCTGAACATCAGCCGCAGCAAAAAC---------TGCCTTCA 573
| ||||| |||.|| .|||||||| .|.|.||.
BL01259___fli 547 GTCAAAGTTC-------CAGGCG-TGCAAAAACAAAGCGGCACGGCATCT 588
BSNT_02665___ 574 TTTTCAAAAGCATTAAAAGAGCAACTTGAAGAGTTAAAACAAAACCGTTC 623
|||||..|..|.|||||||..||.||||..||..|.||||||||.||..|
BL01259___fli 589 TTTTCCGAGTCGTTAAAAGCACAGCTTGCGGAACTGAAACAAAATCGCGC 638
BSNT_02665___ 624 TGAAGGAAAGAAGAAAGGCCCACGTCATCATGAATGA 660
.|||||.|..||||||||||.|..|||.|||||||||
BL01259___fli 639 AGAAGGCAGAAAGAAAGGCCAAAATCAACATGAATGA 675
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.