Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02667 and BL01257

See Amino acid alignment / Visit BSNT_02667 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:22
# Commandline: needle
#    -asequence dna-align/BSNT_02667___fliQ.1.5803.seq
#    -bsequence dna-align/BL01257___fliQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02667___fliQ-BL01257___fliQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02667___fliQ-BL01257___fliQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02667___fliQ
# 2: BL01257___fliQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     192/270 (71.1%)
# Similarity:   192/270 (71.1%)
# Gaps:          24/270 ( 8.9%)
# Score: 744.0
# 
#
#=======================================

BSNT_02667___      1 ------------------------ATGGCGGAAAAAGCCGTATACGTAAC     26
                                             |||||.||||..||.||||||||.||
BL01257___fli      1 ATGAATTCAGAATTTGTTATATCGATGGCTGAAAGGGCTGTATACGTTAC     50

BSNT_02667___     27 GCTGATGATCAGCGGGCCATTATTGGCTATTGCTTTACTGGTCGGTTTAA     76
                     ..||.|.|||||||||||..|.|||||..|.|||.|.||.|||||..|.|
BL01257___fli     51 ATTGCTTATCAGCGGGCCGCTTTTGGCGCTCGCTCTTCTCGTCGGGCTGA    100

BSNT_02667___     77 TTGTCAGCATATTTCAGGCGACAACTCAAATCCAGGAACAGACTTTGGCG    126
                     |.||||||.|.||||||||.||.||.|||||.||||||||||||.|.||.
BL01257___fli    101 TCGTCAGCGTTTTTCAGGCAACCACCCAAATACAGGAACAGACTCTTGCA    150

BSNT_02667___    127 TTTATTCCGAAAATCGTGGCGGTTCTCCTGGCTCTCATTTTTTTTGGTCC    176
                     ||.||||||||||||||.||.|||.|..|.|..|||.|..||||.||.||
BL01257___fli    151 TTCATTCCGAAAATCGTCGCCGTTTTGGTCGGACTCGTCGTTTTCGGCCC    200

BSNT_02667___    177 GTGGATGCTGTCGACGATTCTTTCATTTACAACAGAGCTGTTTTCTAATT    226
                     |||||||||||||||||||.|.|||||..|.||.||||||||.|||||||
BL01257___fli    201 GTGGATGCTGTCGACGATTTTGTCATTCGCGACTGAGCTGTTCTCTAATT    250

BSNT_02667___    227 TAAATCGTTTTGCAGGGTAA    246
                     ||||.||||||||||||||.
BL01257___fli    251 TAAACCGTTTTGCAGGGTAG    270


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